Effeo_BMDM_Veh_2h_1 (CRX1491728; CRA022636)
(Library Construction) The construction of library was perfomed using QuantSeq 3' mRNA-Seq Library Prep Kit (Lexogen) according to the manufacturer's instruction. High-throughtput sequencing was perfomed as single-end 75 sequencing using NextSeq 550. QuantSeq 3' mRNA-Seq reads were aligned using Bowtie2. The read count data were processed based on TMM+CPM normalization method using EdgeR within R. / (Experimental Design) Bone-marrow-derived macrophages (BMDMs) were pre-treated with vehicle or YKL-05-099 then co-cultured with apoptotic cells in time-dependent manner. submitted_instrument_model: Illumina Nextseq 550
NGDC
CRX1491728
SKKU
DRX804913