Visium HD spatial transcriptomics of 5xFAD PBS control mouse brain sample 1
10x Genomics Visium HD spatial transcriptomic library prepared from FFPE mouse brain tissue using the Visium HD Spatial Gene Expression for FFPE library v1 - Mouse (6.5 mm) kit and sequenced on an Illumina NovaSeq 6000 platform by Macrogen. Raw FASTQ files are submitted to SRA; downstream spatial transcriptomic processing was performed using the standard Visium HD binned-output workflow. Main dataset; mouse received intragingival PBS injections into the interdental gingiva between the maxillary molars twice weekly for 12 weeks; injections started on 2024-08-20; brain tissue was collected on 2024-11-12.