GSM8774333: gnotobiotic_Enterococcus-faecalis_2; Enterococcus faecalis; Mus musculus; RNA-Seq
RNA extracted following the protocol found at: dx.doi.org/10.17504/protocols.io.5jyl8jjx7g2w/v1 rRNA depletion using siTOOLS riboPOOL probes: filamentous fungi, pan-bacteria, and Mus musculus (probes used when species is present). Followed manufacturer protocol for one-step depletion followed by NEB Monarch RNA Clean Up 10ug kit (NEB #T2030) per provided protocol. 5 ng of rRNA depleted RNA was used to prepare libraries using CORALL Total RNA-seq kit according to provided protocols. RNA extracted following the protocol found at: dx.doi.org/10.17504/protocols.io.5jyl8jjx7g2w/v1