Pre_WF3
PCR products of each sample were purified using Ampure XP magnetic purification beads. An index PCR was performed to attach dual barcodes and Illumina sequencing adapters using Nextera XT Index kit (Illumina). Final PCR products were verified on 1.5% DNA agarose gel and quantified using Pico dsDNA assay (Invitrogen). An equal molar of each sample was combined and purified again using Ampure XP beads as the library. The library was diluted and spiked with 5% PhiX control (Illumina) and sequenced by Illumina MiSeq sequencing system (2  250bp).