options
--readTypes=TBTT --read1PairFiles=Untreated_Control_S1_L001_R1_001.fastq.gz --read2PairFiles=Untreated_Control_S1_L001_R2_001.fastq.gz --read3PairFiles=Untreated_Control_S1_L001_I1_001.fastq.gz --read4PairFiles=Untreated_Control_S1_L001_I2_001.fastq.gz