title: BAM-LASUNDRA
organism: hot springs metagenome
description: Geothermal areas are the main permanent hot places of the world, and these areas are the major habitats of thermophilic bacteria. In culture independent method, metagenome was isolated using manual and kit based methods. The short gun sequencing of metagenome was performed using Ion torrent PGM platform. The analysis of sequencing data revealed that this spring is dominated by bacterial taxa. MG-RAST based community analysis showed that bacteria were found in dominancy with 99.2% in domain hit distribution. Firmicutes was found to be dominant in domain hit classification followed by proteaobacteria. Moreover, unclassified sequences also found in this metagenome indicate there are possibilities of getting novel organisms.
attributes.tag: ENA first public
attributes.value: 2015-03-14
attributes.tag: ENA last update
attributes.value: 2016-10-21
attributes.tag: External Id
attributes.value: SAMEA3299992
attributes.tag: INSDC center alias
attributes.value: Hem. North Gujarat University - India
attributes.tag: INSDC center name
attributes.value: Hem. North Gujarat University - India
attributes.tag: INSDC first public
attributes.value: 2015-03-14T17:07:39Z
attributes.tag: INSDC last update
attributes.value: 2016-10-21T09:44:02Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: Hot spring microbial communities from Lasundra 11
attributes.tag: collection date
attributes.value: 2014-10-16
attributes.tag: environment (biome)
attributes.value: Hot spring
attributes.tag: environment (feature)
attributes.value: Water reservoir
attributes.tag: environment (material)
attributes.value: Hot water
attributes.tag: geographic location (country and/or sea)
attributes.value: India
attributes.tag: geographic location (depth)
attributes.value: 8
attributes.tag: geographic location (latitude)
attributes.value: 22.92
attributes.tag: geographic location (longitude)
attributes.value: 73.20
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: project name
attributes.value: Metagenomic exploration of Lasundra hot spring
attributes.tag: sample name
attributes.value: Hot spring microbial communities from Lasundra 11
attributes.tag: sequencing method
attributes.value: Ion torrent PGM platform
attributes.tag: water environmental package
attributes.value: water