title: EvolutionTrajectories
organism: Saccharomyces cerevisiae
description: Data include barcode counts of all lineages in the yeast population over the course of evolution under Evo1D, Evo5D and Evo1/5D evolutionary conditions. Two replicates were conducted under each evolutionary condition. Each time point are uniquely indexed using the same method as our fitness measurements. Assume cellls go through 7 generatios during each transfer. Sample indices are formated as following: condition replicate generation multiplex_f multiplex_r(reverse complement);1D r1 0 CGATGT CGCTCTATC;1D r2 0 CGATGT CGCTCTATC;1D r1 0 CGATGT GCGTACGCA;1D r2 0 CGATGT GCGTACGCA;1D r1 7 ACAGTG GCGTACGCA;1D r2 7 TGACCA CGCTCTATC;1D r1 28 GCCAAT GCGTACGCA;1D r2 28 ATCACG GCGTACGCA;1D r1 49 CAGATC GCGTACGCA;1D r2 49 GGCTAC GCGTACGCA;1D r1 70 TAGCTT GCGTACGCA;1D r2 70 TTAGGC GCGTACGCA;1D r1 91 ATCACG ATACTGCGT;1D r2 91 CAGATC ATACTGCGT;1D r1 112 GGCTAC ATACTGCGT;1D r2 112 TAGCTT ATACTGCGT;1D r1 133 TTAGGC ATACTGCGT;1D r2 133 ACTTGA ATACTGCGT;1D r1 154 GATCAG ATACTGCGT;1D r2 154 CTTGTA ATACTGCGT;1D r1 175 CGATGT ACTAGCAGA;1D r2 175 ACAGTG ACTAGCAGA;5D r1 0 ACTTGA CGCTCTATC;5D r2 0 ACTTGA CGCTCTATC;5D r1 7 GATCAG GCGTACGCA;5D r2 7 CTTGTA GCGTACGCA;5D r1 28 CGATGT ATACTGCGT;5D r2 28 ACAGTG ATACTGCGT;5D r1 49 TGACCA ATACTGCGT;5D r2 49 GCCAAT ATACTGCGT;5D r1 70 TGACCA ACTAGCAGA;5D r2 70 GCCAAT ACTAGCAGA;5D r1 91 ATCACG ACTAGCAGA;5D r2 91 CAGATC ACTAGCAGA;5D r1 112 TAGCTT CTGCTACTC;5D r2 112 CTTGTA TGAGCTAGC;1/5D r1 0 GGCTAC ACTAGCAGA;1/5D r2 0 GGCTAC ACTAGCAGA;1/5D r1 7 TAGCTT ACTAGCAGA;1/5D r2 7 TAGCTT ACTAGCAGA;1/5D r1 14 TTAGGC ACTAGCAGA;1/5D r2 14 ACTTGA ACTAGCAGA;1/5D r1 35 GATCAG ACTAGCAGA;1/5D r2 35 CTTGTA ACTAGCAGA;1/5D r1 56 CGATGT TGAGCTAGC;1/5D r2 56 ACAGTG TGAGCTAGC;1/5D r1 77 TGACCA TGAGCTAGC;1/5D r2 77 GCCAAT TGAGCTAGC;1/5D r1 98 ATCACG TGAGCTAGC;1/5D r2 98 CAGATC TGAGCTAGC;1/5D r1 119 GGCTAC TGAGCTAGC;1/5D r2 119 TAGCTT TGAGCTAGC;1/5D r1 140 TTAGGC TGAGCTAGC;1/5D r2 140 ACTTGA TGAGCTAGC;1/5D r1 161 CGATGT CTGCTACTC;1/5D r2 161 ACAGTG CTGCTACT
attributes.tag: strain
attributes.value: BY4709
attributes.tag: isolation_source
attributes.value: Experimental evolution
attributes.tag: collection_date
attributes.value: missing
attributes.tag: geo_loc_name
attributes.value: not applicable
attributes.tag: sample_type
attributes.value: Yeast population over the course of evolution
attributes.tag: mating_type
attributes.value: alpha
attributes.tag: BioSampleModel
attributes.value: Microbe, viral or environmental