title: T_007 rep2
organism: Homo sapiens
description: Protocols: Biopsies were collected from consenting patients and snap frozen. Biopsies were minced with a scalpel and lysed in ATAC lysis buffer and Tn5 reactions were performed as described in \An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissues\ Corces et al (2017) https://www.nature.com/articles/nmeth.4396 Libraries were constructed by amplifying transposed DNA with Illumina Nextera adapters as described in \An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissues\ Corces et al (2017) https://www.nature.com/articles/nmeth.4396
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2020-03-09T04:03:25Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2019-10-17T09:39:43Z
attributes.tag: External Id
attributes.value: SAMEA6087989
attributes.tag: INSDC center name
attributes.value: UNIVERSITY OF MANCHESTER
attributes.tag: INSDC first public
attributes.value: 2020-03-09T04:03:25Z
attributes.tag: INSDC last update
attributes.value: 2019-10-17T09:39:43Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: E-MTAB-8447:T_007 rep2
attributes.tag: age
attributes.value: not available
attributes.tag: broker name
attributes.value: ArrayExpress
attributes.tag: common name
attributes.value: human
attributes.tag: disease
attributes.value: esophageal adenocarcinoma
attributes.tag: individual
attributes.value: 1
attributes.tag: organism part
attributes.value: esophagus
attributes.tag: sample name
attributes.value: E-MTAB-8447:T_007 rep2
attributes.tag: scientific_name
attributes.value: Homo sapiens
attributes.tag: sex
attributes.value: male