title: GeoB19351-14 SAG sample
organism: Candidatus Syntropharchaeum sp. GoM_oil
description: SAG Sample from sediment core 10 cm long from an oil seep
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2019-07-11T04:03:48Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2019-07-04T22:16:02Z
attributes.tag: External Id
attributes.value: SAMEA5756322
attributes.tag: INSDC center name
attributes.value: Max Planck Institute for Marine Microbiology
attributes.tag: INSDC first public
attributes.value: 2019-07-11T04:03:48Z
attributes.tag: INSDC last update
attributes.value: 2019-07-04T22:16:02Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: gfbio:sag-sample:67c8463b-6cbd-4d56-a398-d795175a9500
attributes.tag: WGA amplification approach
attributes.value: mda based
attributes.tag: assembly quality
attributes.value: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
attributes.tag: assembly software
attributes.value: SPAdes v.3.0.0
attributes.tag: broker name
attributes.value: GFBIO
attributes.tag: collection date
attributes.value: 2015-03-20
attributes.tag: completeness score
attributes.value: 42.72
attributes.tag: completeness software
attributes.value: checkm
attributes.tag: contamination score
attributes.value: 0
attributes.tag: environment (biome)
attributes.value: deep marine sediment [ENVO:00002113]
attributes.tag: environment (feature)
attributes.value: oil seep [ENVO:00002063]
attributes.tag: environment (material)
attributes.value: marine sediment [ENVO:03000033]
attributes.tag: geographic location (country and/or sea)
attributes.value: Atlantic Ocean
attributes.tag: geographic location (depth)
attributes.value: 0.00-0.03
attributes.tag: geographic location (elevation)
attributes.value: -2925
attributes.tag: geographic location (latitude)
attributes.value: 21.8999
attributes.tag: geographic location (longitude)
attributes.value: -93.43518
attributes.tag: geographic location (region and locality)
attributes.value: Gulf of Mexico: Campeche Knolls, Chapopote asphalt volcano
attributes.tag: investigation type
attributes.value: single amplified genome
attributes.tag: isolation source
attributes.value: sediment core from an oil seep
attributes.tag: metagenomic source
attributes.value: marine sediment metagenome
attributes.tag: project name
attributes.value: Degradation of hydrocarbons by archaea in the Gulf of Mexico
attributes.tag: sample derived from
attributes.value: ERS3467135,ERR3365596
attributes.tag: sample name
attributes.value: gfbio:sag-sample:67c8463b-6cbd-4d56-a398-d795175a9500
attributes.tag: scientific_name
attributes.value: Candidatus Syntrophoarchaeum sp. GoM_oil
attributes.tag: sequencing method
attributes.value: NextSeq 500
attributes.tag: single cell or viral particle lysis approach
attributes.value: combination
attributes.tag: sorting technology
attributes.value: flow cytometric cell sorting
attributes.tag: taxonomic identity marker
attributes.value: 16S rRNA
attributes.tag: total depth of water column
attributes.value: 2925