organism: feces metagenome
attributes.tag: host_body_temp
attributes.value: 39.0
attributes.tag: bioproject_accession
attributes.value: PRJNA339155
attributes.tag: perturbation
attributes.value: Salmonella challenge caused slightly decreased perturbation in the pigs that were previously adminstered G-CSF
attributes.tag: samp_vol_we_dna_ext
attributes.value: 25 mg
attributes.tag: collection_date
attributes.value: 2013-12-17
attributes.tag: sample_title
attributes.value: 41_D7_GCSF
attributes.tag: host_subject_id
attributes.value: 41
attributes.tag: host
attributes.value: Sus scrofa
attributes.tag: chem_administration
attributes.value: intranasal inoculation with 1x10^7 CFU of nalidixic acid resistant Salmonella enterica serovar Typhimurium UK1 at D0 of the study timeline
attributes.tag: host_length
attributes.value: 41_D7_GCSF
attributes.tag: lat_lon
attributes.value: 42.03 N 93.63 W
attributes.tag: host_age
attributes.value: 6 weeks old at D0
attributes.tag: misc_param
attributes.value: the piglets were weaned at 2 weeks of age and shipped to the NADC on Nov. 14th, 2076
attributes.tag: host_tot_mass
attributes.value: 7.3 kg
attributes.tag: host_disease
attributes.value: All pigs were challenged via intranasal inoculation with 1x10^7 CFU of nalidixic acid resistant Salmonella enterica serovar Typhimurium UK1 at D0 of the study timeline
attributes.tag: gravidity
attributes.value: this piglet is littermates with piglets from sow #133
attributes.tag: sample_name
attributes.value: P41D7noGCSF
attributes.tag: host_body_product
attributes.value: feces
attributes.tag: env_feature
attributes.value: climate-controlled environment in a research barn
attributes.tag: geo_loc_name
attributes.value: USA: Ames, Iowa
attributes.tag: host_diet
attributes.value: pigs were on "finisher" diet NexGen 14 Complete (Kent feeds) during the study: crude protein, min 14%; Lysine, min 0.7%; crude fat, min 3%; crude fiber max 5%; calcium min 0.5%; calcium max 1%; phosphorus 0.5%; salt (NaCl) min 0.2%; salt max (0.7%; selenium min 0.3 ppm; zinc min 90 ppm; vitamin A min 1,700 IU/lb; vitamin D3 min 435 IU/lb; vitamin E min 8 IU/lb
attributes.tag: env_biome
attributes.value: climate-controlled environment in a research barn
attributes.tag: samp_store_temp
attributes.value: - 80C
attributes.tag: host_sex
attributes.value: male
attributes.tag: env_material
attributes.value: intestinal tract
attributes.tag: BioSampleModel
attributes.value: MIMARKS.survey
attributes.tag: BioSampleModel
attributes.value: MIGS/MIMS/MIMARKS.host-associated