organism: hot springs metagenome
description: Molecular approaches used to analyze the microbial diversity allow the study of uncultivable microorganisms and contribute towards our understanding of the microbial world. In our study, total community DNA was isolated from environmental water sample by manual and kit based methods. Here, we use Ion-torrent PGM platform to sequence metagenome. Analysis of the community DNA revealed that the phyla Firmicutes and Proteobacteria were the most abundant. Moreover, unclassified sequences also found in this metagenome indicate there are possibilities of getting novel organisms.
attributes.tag: ENA first public
attributes.value: 2015-03-27
attributes.tag: ENA last update
attributes.value: 2016-10-21
attributes.tag: External Id
attributes.value: SAMEA3307975
attributes.tag: INSDC center alias
attributes.value: Hem. North Gujarat University - India
attributes.tag: INSDC center name
attributes.value: Hem. North Gujarat University - India
attributes.tag: INSDC first public
attributes.value: 2015-03-27T17:06:50Z
attributes.tag: INSDC last update
attributes.value: 2016-10-21T09:44:02Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: Hot spring microbial communities from Tuva timba
attributes.tag: collection date
attributes.value: 2012-12-13
attributes.tag: environment (biome)
attributes.value: Hot spring
attributes.tag: environment (feature)
attributes.value: Water reservoir
attributes.tag: environment (material)
attributes.value: Hot water
attributes.tag: geographic location (country and/or sea)
attributes.value: India
attributes.tag: geographic location (depth)
attributes.value: 10
attributes.tag: geographic location (latitude)
attributes.value: 22.79
attributes.tag: geographic location (longitude)
attributes.value: 73.46
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: project name
attributes.value: BAM-TUVA TIMBA
attributes.tag: sample name
attributes.value: Hot spring microbial communities from Tuva timba
attributes.tag: sequencing method
attributes.value: Ion torrent PGM platform
attributes.tag: water environmental package
attributes.value: water