organism: Oryza sativa
description: Mapping of quantitative trait loci underlying cold tolerance in rice seedlings via high-throughput sequencing of pooled extremes. 
   In total, 10,800 F3 seedlings from a cross between rice varieties Nipponbare and LPBG were tested for cold tolerance, from which 430 extremely sensitive (ES) and 385 extremely tolerant (ET) individuals were selected and a pair of DNA pools were constructed. By sequencing the two DNA pools with the Illumina technology, a total of ~800 M 101-bp pair-end reads were obtained, with approximately 360 M and 440 M from the ES and ET pools, respectively.
attributes.tag: collection_date
attributes.value: 2011-11-11
attributes.tag: geo_loc_name
attributes.value: China: Fujian
attributes.tag: phenotype
attributes.value: extremely cold tolerant at seeding stage
attributes.tag: cultivar
attributes.value: a cross between a japonica rice variety Nipponbare and an indica rice variety LPBG