title: French Guiana forest soil metagenomic sequencing study
organism: metagenome
description: Soil samples has been collected at Trois-Sauts, an isolated settlement in Amazonian National Park. In order to assess anthropogenic impact on microbial communities, a 3km transect has been sampled every 600m in order to generate anthropization gradient, from the village to the forest. Each soil samples DNA has been extracted with MoBio Power Soil Max extraction kit and directly sequenced without any prior amplification with Roche 454 Titanium chemistery.
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2015-04-02T17:02:14Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2018-03-09T10:11:29Z
attributes.tag: External Id
attributes.value: SAMEA2060401
attributes.tag: INSDC center name
attributes.value: ECL
attributes.tag: INSDC first public
attributes.value: 2015-04-02T17:02:14Z
attributes.tag: INSDC last update
attributes.value: 2018-03-09T10:11:29Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: 600m1
attributes.tag: collection date
attributes.value: 2010-10
attributes.tag: depth
attributes.value: 0.1
attributes.tag: environment (biome)
attributes.value: Tropical humid forests
attributes.tag: environment (feature)
attributes.value: forest soil
attributes.tag: environment (material)
attributes.value: forest soil
attributes.tag: geographic location (countryand/orsea,region)
attributes.value: French Guiana
attributes.tag: geographic location (elevation)
attributes.value: 127
attributes.tag: geographic location (latitude)
attributes.value: 2.257017
attributes.tag: geographic location (longitude)
attributes.value: -52.873283
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: project name
attributes.value: GuyaSol
attributes.tag: sample name
attributes.value: 600m1
attributes.tag: scientific_name
attributes.value: metagenome
attributes.tag: sequencing method
attributes.value: Roche 454 GS FLX Titanium
attributes.tag: soil environmental package
attributes.value: soil