title: Draft genome of Kocuria rhizophila, strain G2
organism: Kocuria rhizophila
description: Here we present a draft genome of Kocuria rhizophila G2. The strain was isolated from a wall in small Danish Slaughterhouse. We have in a recent publication shown how this strain can be involved in synergistic biofilm formation with other bacterial species isolated from the same environment. Genome sequencing libraries were prepared using the Nextera XT kit (Illumina, USA), according to the manufacturer's recommendations, followed by sequencing as a part of the flowcell, as 2 × 250-base paired-end reads using the Illumina MiSeq (Illumina, USA) technology. The reads were cleaned and trimmed using CLC Genomics Workbench 7 (CLC bio, Denmark). Cleaned reads were assembled using SPAdes v 3.5.0. Obtained contigs were analyzed by VecScreen, to ensure no primer, phage or transposase contamination occurred in the contigs. Contigs smaller than 500bp were discarded.
attributes.tag: ENA first public
attributes.value: 2016-01-01
attributes.tag: ENA last update
attributes.value: 2015-10-13
attributes.tag: External Id
attributes.value: SAMEA3489747
attributes.tag: INSDC center alias
attributes.value: Universitetsparken 15
attributes.tag: INSDC center name
attributes.value: Universitetsparken 15
attributes.tag: INSDC first public
attributes.value: 2016-01-01T17:01:22Z
attributes.tag: INSDC last update
attributes.value: 2015-10-13T18:21:16Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: 6
attributes.tag: collected by
attributes.value: Mette Burmolle
attributes.tag: isolate
attributes.value: Kocuria rhizophil
attributes.tag: isolation source
attributes.value: Meat Chopper / Grinder in a Danish Slaughterhouse
attributes.tag: sample name
attributes.value: 6
attributes.tag: strain
attributes.value: G2