title: 13114.mayer.34.s002
organism: freshwater sediment metagenome
description: sediment sample CC2
attributes.tag: ENA first public
attributes.value: 2020-12-17
attributes.tag: ENA last update
attributes.value: 2020-12-15
attributes.tag: External Id
attributes.value: SAMEA7723441
attributes.tag: INSDC center alias
attributes.value: UCSDMI
attributes.tag: INSDC center name
attributes.value: University of California San Diego Microbiome Initiative
attributes.tag: INSDC first public
attributes.value: 2020-12-17T04:08:05Z
attributes.tag: INSDC last update
attributes.value: 2020-12-15T22:07:03Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13114:13114.mayer.34.s002
attributes.tag: alpha_shotgun_woltka_faithspd
attributes.value: 195.72491180141103
attributes.tag: alpha_shotgun_woltka_min10k_faithspd
attributes.value: 191.99835233163685
attributes.tag: alpha_shotgun_woltka_min10k_richness
attributes.value: 1025.0
attributes.tag: alpha_shotgun_woltka_min10k_shannon
attributes.value: 5.472763936015395
attributes.tag: alpha_shotgun_woltka_min3450_faithspd
attributes.value: 99.04574894
attributes.tag: alpha_shotgun_woltka_min3450_richness
attributes.value: 626.0
attributes.tag: alpha_shotgun_woltka_min3450_shannon
attributes.value: 6.235525412
attributes.tag: alpha_shotgun_woltka_rar10k_faithspd
attributes.value: 119.00850644178469
attributes.tag: alpha_shotgun_woltka_rar10k_richness
attributes.value: 598.0
attributes.tag: alpha_shotgun_woltka_rar10k_shannon
attributes.value: 5.3972175891914524
attributes.tag: alpha_shotgun_woltka_rar3450_faithspd
attributes.value: 68.35218028
attributes.tag: alpha_shotgun_woltka_rar3450_richness
attributes.value: 390.0
attributes.tag: alpha_shotgun_woltka_rar3450_shannon
attributes.value: 6.080523892
attributes.tag: alpha_shotgun_woltka_richness
attributes.value: 1037.0
attributes.tag: alpha_shotgun_woltka_shannon
attributes.value: 5.47824357775462
attributes.tag: barcode_prefix
attributes.value: mayer.34.s002
attributes.tag: collection_timestamp
attributes.value: 1/22/16 0:00
attributes.tag: depth_sample
attributes.value: 0.1
attributes.tag: elevation
attributes.value: 3191
attributes.tag: emp500_principal_investigator
attributes.value: Mayer
attributes.tag: emp500_study_id
attributes.value: 34
attributes.tag: emp500_title
attributes.value: Animas watershed
attributes.tag: empo_0
attributes.value: EMP sample
attributes.tag: empo_1
attributes.value: Free-living
attributes.tag: empo_2
attributes.value: Non-saline
attributes.tag: empo_3
attributes.value: Sediment (non-saline)
attributes.tag: env biome
attributes.value: Small river biome
attributes.tag: env feature
attributes.value: tributary
attributes.tag: env package
attributes.value: sediment
attributes.tag: env_material
attributes.value: stream sediment
attributes.tag: environmental_package
attributes.value: sediment
attributes.tag: gcms_analysis_batch
attributes.value: note applicable
attributes.tag: gcms_run_location
attributes.value: UCSD
attributes.tag: gcms_sample_name
attributes.value: EMP_Feces_mayer_34_s002_a03_M_081
attributes.tag: gcms_sequence
attributes.value: 081
attributes.tag: geo loc name
attributes.value: USA: State of Colorado,San Juan County,Animas River
attributes.tag: host subject id
attributes.value: CC2
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: latitude
attributes.value: 37.89004
attributes.tag: lcms_batch
attributes.value: 1.00
attributes.tag: lcms_extraction_protocol
attributes.value: Bulk_201901_UCSD
attributes.tag: lcms_position
attributes.value: 1B5
attributes.tag: lcms_replicate
attributes.value: no
attributes.tag: lcms_sample_name_cmn
attributes.value: 1B5_1_23_mayer-34-s002-a04
attributes.tag: lcms_sample_name_fbmn
attributes.value: 1B5_1_23_mayer-34-s002-a04.mzML
attributes.tag: lcms_sample_type
attributes.value: Sample
attributes.tag: lcms_sample_type_sub
attributes.value: Bulk
attributes.tag: longitude
attributes.value: -107.65252
attributes.tag: original sample id
attributes.value: Mayer34.sediment.2
attributes.tag: oxygen_mg_per_l
attributes.value: 7.84
attributes.tag: ph
attributes.value: 5.55
attributes.tag: physical_specimen_location
attributes.value: UCSD Knight Lab Freezer I and MayerLab -80 Room 212
attributes.tag: physical_specimen_remaining
attributes.value: TRUE
attributes.tag: project name
attributes.value: Animas Watershed
attributes.tag: read_count_shotgun_r1
attributes.value: 12942118.0
attributes.tag: read_count_shotgun_rep200
attributes.value: 162561.0
attributes.tag: read_count_shotgun_woltka_uniq
attributes.value: 46435.0
attributes.tag: redox_potential_millivolts
attributes.value: 153
attributes.tag: salinity_psu
attributes.value: 0.93
attributes.tag: sample name
attributes.value: qiita_sid_13114:13114.mayer.34.s002
attributes.tag: sample type
attributes.value: sediment
attributes.tag: sample_name_original
attributes.value: Mayer34.sediment.2
attributes.tag: sample_name_plus_plate
attributes.value: 1.Mayer34.sediment.2
attributes.tag: sampling method
attributes.value: bulk
attributes.tag: songbird_train_empo_3
attributes.value: Train
attributes.tag: study_sample_number
attributes.value: 2
attributes.tag: temperature_deg_c
attributes.value: 3.1