title: 13114.jensen.43.s011
organism: marine sediment metagenome
description: Jensen43.sediment.34
attributes.tag: ENA first public
attributes.value: 2020-12-17
attributes.tag: ENA last update
attributes.value: 2020-12-15
attributes.tag: External Id
attributes.value: SAMEA7723610
attributes.tag: INSDC center alias
attributes.value: UCSDMI
attributes.tag: INSDC center name
attributes.value: University of California San Diego Microbiome Initiative
attributes.tag: INSDC first public
attributes.value: 2020-12-17T04:08:04Z
attributes.tag: INSDC last update
attributes.value: 2020-12-15T23:55:47Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13114:13114.jensen.43.s011
attributes.tag: alpha_shotgun_woltka_faithspd
attributes.value: 165.40659893074462
attributes.tag: alpha_shotgun_woltka_min10k_faithspd
attributes.value: 165.31297299059497
attributes.tag: alpha_shotgun_woltka_min10k_richness
attributes.value: 626.0
attributes.tag: alpha_shotgun_woltka_min10k_shannon
attributes.value: 4.990162706246477
attributes.tag: alpha_shotgun_woltka_min3450_faithspd
attributes.value: 65.15024575
attributes.tag: alpha_shotgun_woltka_min3450_richness
attributes.value: 274.0
attributes.tag: alpha_shotgun_woltka_min3450_shannon
attributes.value: 3.415521543
attributes.tag: alpha_shotgun_woltka_rar10k_faithspd
attributes.value: 149.92472544792963
attributes.tag: alpha_shotgun_woltka_rar10k_richness
attributes.value: 559.0
attributes.tag: alpha_shotgun_woltka_rar10k_shannon
attributes.value: 4.971629692220351
attributes.tag: alpha_shotgun_woltka_rar3450_faithspd
attributes.value: 53.04617419
attributes.tag: alpha_shotgun_woltka_rar3450_richness
attributes.value: 206.0
attributes.tag: alpha_shotgun_woltka_rar3450_shannon
attributes.value: 3.343000904
attributes.tag: alpha_shotgun_woltka_richness
attributes.value: 627.0
attributes.tag: alpha_shotgun_woltka_shannon
attributes.value: 4.9914637274637
attributes.tag: barcode_prefix
attributes.value: jensen.43.s011
attributes.tag: collection_timestamp
attributes.value: 7/5/12
attributes.tag: depth_sample
attributes.value: 700
attributes.tag: elevation
attributes.value: 0
attributes.tag: emp500_principal_investigator
attributes.value: Jensen
attributes.tag: emp500_study_id
attributes.value: 43
attributes.tag: emp500_title
attributes.value: Ocean sediments
attributes.tag: empo_0
attributes.value: EMP sample
attributes.tag: empo_1
attributes.value: Free-living
attributes.tag: empo_2
attributes.value: Saline
attributes.tag: empo_3
attributes.value: Sediment (saline)
attributes.tag: env biome
attributes.value: marine benthic biome
attributes.tag: env feature
attributes.value: mud
attributes.tag: env package
attributes.value: sediment
attributes.tag: env_material
attributes.value: marine sediment
attributes.tag: environmental_package
attributes.value: sediment
attributes.tag: gcms_analysis_batch
attributes.value: note applicable
attributes.tag: gcms_run_location
attributes.value: UCSD
attributes.tag: gcms_sample_name
attributes.value: EMP_Feces_jensen_43_s011_a03_M_109
attributes.tag: gcms_sequence
attributes.value: 109
attributes.tag: geo loc name
attributes.value: Pacific Ocean:Northeast Pacific Ocean,San Diego coastal
attributes.tag: host subject id
attributes.value: MCO700-17.4
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: latitude
attributes.value: 32.81
attributes.tag: lcms_batch
attributes.value: 7.00
attributes.tag: lcms_extraction_protocol
attributes.value: Swabs_201901_UCSD
attributes.tag: lcms_position
attributes.value: 7F7
attributes.tag: lcms_replicate
attributes.value: no
attributes.tag: lcms_sample_name_cmn
attributes.value: 7F7_8_57_jensen-43-s011-a04
attributes.tag: lcms_sample_name_fbmn
attributes.value: 7F7_8_57_jensen-43-s011-a04.mzML
attributes.tag: lcms_sample_type
attributes.value: Sample
attributes.tag: lcms_sample_type_sub
attributes.value: Swabs
attributes.tag: longitude
attributes.value: -117.4509
attributes.tag: original sample id
attributes.value: Jensen43.MCO700.17.4
attributes.tag: physical_specimen_location
attributes.value: UCSD Knight Lab Freezer I and SIO Jensen Lab
attributes.tag: physical_specimen_remaining
attributes.value: TRUE
attributes.tag: project name
attributes.value: Jensen sediments from global ocean
attributes.tag: read_count_shotgun_r1
attributes.value: 13198921.0
attributes.tag: read_count_shotgun_rep200
attributes.value: 9062.0
attributes.tag: read_count_shotgun_woltka_uniq
attributes.value: 14216.0
attributes.tag: sample name
attributes.value: qiita_sid_13114:13114.jensen.43.s011
attributes.tag: sample type
attributes.value: sediment
attributes.tag: sample_info_free_text
attributes.value: Sediment core 3-4 cm
attributes.tag: sample_name_original
attributes.value: Jensen43.MCO700.17.4
attributes.tag: sample_name_plus_plate
attributes.value: 3.Jensen43.MCO700.17.4
attributes.tag: sampling method
attributes.value: bulk
attributes.tag: site description
attributes.value: mud
attributes.tag: songbird_train_empo_3
attributes.value: Train
attributes.tag: study_sample_number
attributes.value: 11
attributes.tag: tier
attributes.value: 1