title: 13114.zaneveld.9.s022
organism: seawater metagenome
description: Reef Water sampled from site Isla Contadora,Las Perlas,Panama as sample E11.Water.1.20150501 of the Global Coral Microbiome Project.
attributes.tag: ENA first public
attributes.value: 2020-12-17
attributes.tag: ENA last update
attributes.value: 2020-12-15
attributes.tag: External Id
attributes.value: SAMEA7723560
attributes.tag: INSDC center alias
attributes.value: UCSDMI
attributes.tag: INSDC center name
attributes.value: University of California San Diego Microbiome Initiative
attributes.tag: INSDC first public
attributes.value: 2020-12-17T04:08:05Z
attributes.tag: INSDC last update
attributes.value: 2020-12-15T22:07:12Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13114:13114.zaneveld.9.s022
attributes.tag: alpha_shotgun_woltka_faithspd
attributes.value: 109.0654171076117
attributes.tag: alpha_shotgun_woltka_min10k_faithspd
attributes.value: 109.0654171076117
attributes.tag: alpha_shotgun_woltka_min10k_richness
attributes.value: 498.0
attributes.tag: alpha_shotgun_woltka_min10k_shannon
attributes.value: 4.726440986122193
attributes.tag: alpha_shotgun_woltka_min3450_faithspd
attributes.value: 55.90017197
attributes.tag: alpha_shotgun_woltka_min3450_richness
attributes.value: 198.0
attributes.tag: alpha_shotgun_woltka_min3450_shannon
attributes.value: 4.0201578960000015
attributes.tag: alpha_shotgun_woltka_rar10k_faithspd
attributes.value: 41.21892899489808
attributes.tag: alpha_shotgun_woltka_rar10k_richness
attributes.value: 157.0
attributes.tag: alpha_shotgun_woltka_rar10k_shannon
attributes.value: 4.7319601734896395
attributes.tag: alpha_shotgun_woltka_rar3450_faithspd
attributes.value: 17.56651186
attributes.tag: alpha_shotgun_woltka_rar3450_richness
attributes.value: 53.0
attributes.tag: alpha_shotgun_woltka_rar3450_shannon
attributes.value: 3.972245101
attributes.tag: alpha_shotgun_woltka_richness
attributes.value: 498.0
attributes.tag: alpha_shotgun_woltka_shannon
attributes.value: 4.726440986122193
attributes.tag: barcode_prefix
attributes.value: zaneveld.9.s022
attributes.tag: collection id
attributes.value: Isla Contadora_20150501
attributes.tag: collection_timestamp
attributes.value: 5/1/15 11:09
attributes.tag: daily_replicate
attributes.value: 1
attributes.tag: depth_sample
attributes.value: 3.8
attributes.tag: dna_extracted
attributes.value: n
attributes.tag: elevation
attributes.value: 0
attributes.tag: emp500_principal_investigator
attributes.value: Zaneveld
attributes.tag: emp500_study_id
attributes.value: 9
attributes.tag: emp500_title
attributes.value: Scleractinian corals
attributes.tag: empo_0
attributes.value: EMP sample
attributes.tag: empo_1
attributes.value: Free-living
attributes.tag: empo_2
attributes.value: Saline
attributes.tag: empo_3
attributes.value: Water (saline)
attributes.tag: env biome
attributes.value: marine reef biome
attributes.tag: env feature
attributes.value: coral reef
attributes.tag: env package
attributes.value: host-associated
attributes.tag: env_material
attributes.value: sea water
attributes.tag: environmental_package
attributes.value: host-associated
attributes.tag: expedition_number
attributes.value: E11
attributes.tag: experimental_factor
attributes.value: not provided
attributes.tag: geo loc name
attributes.value: Panama
attributes.tag: host subject id
attributes.value: E11.Water.1.20150502
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: latitude
attributes.value: 8.6288111
attributes.tag: lcms_batch
attributes.value: 3.00
attributes.tag: lcms_extraction_protocol
attributes.value: Bulk_201901_UCSD
attributes.tag: lcms_position
attributes.value: 3H1
attributes.tag: lcms_replicate
attributes.value: no
attributes.tag: lcms_sample_name_cmn
attributes.value: 3H1_7_17_zaneveld-9-s022-a03
attributes.tag: lcms_sample_name_fbmn
attributes.value: 3H1_7_17_zaneveld-9-s022-a03.mzML
attributes.tag: lcms_sample_type
attributes.value: Sample
attributes.tag: lcms_sample_type_sub
attributes.value: Bulk
attributes.tag: local_colony_name
attributes.value: PW_173
attributes.tag: local_sample_id
attributes.value: PW_173
attributes.tag: longitude
attributes.value: -79.0417556
attributes.tag: original sample id
attributes.value: Zaneveld9.22.E11.Water.1.20150502.H2O
attributes.tag: physical samp avail now
attributes.value: y
attributes.tag: physical_specimen_location
attributes.value: UCSD Knight Lab Freezer I and Medina Lab, Penn State
attributes.tag: physical_specimen_remaining
attributes.value: TRUE
attributes.tag: project name
attributes.value: Co-evolution of scleractinian corals and their microbial symbionts
attributes.tag: read_count_shotgun_r1
attributes.value: 8113820.0
attributes.tag: read_count_shotgun_rep200
attributes.value: 26397.0
attributes.tag: read_count_shotgun_woltka_uniq
attributes.value: 316530.0
attributes.tag: reef_name
attributes.value: Isla Contadora
attributes.tag: reef_type
attributes.value: Fringing Reef
attributes.tag: sample name
attributes.value: qiita_sid_13114:13114.zaneveld.9.s022
attributes.tag: sample type
attributes.value: seawater
attributes.tag: sample_name_original
attributes.value: Zaneveld9.22.E11.Water.1.20150502.H2O
attributes.tag: sample_name_plus_plate
attributes.value: 4.Zaneveld9.22.E11.Water.1.20150502.H2O
attributes.tag: sampling method
attributes.value: fractionated
attributes.tag: sampling_expedition
attributes.value: E11_Pacific_Panama_2015
attributes.tag: site name
attributes.value: Las Perlas
attributes.tag: songbird_train_empo_3
attributes.value: Train
attributes.tag: study_sample_number
attributes.value: 22
attributes.tag: temperature_deg_c
attributes.value: 29
attributes.tag: tier
attributes.value: 2