title: 13114.angenent.65.s005
organism: bioreactor metagenome
description: Corn Beer Fermentation Bioreactor Biomass
attributes.tag: ENA first public
attributes.value: 2020-12-17
attributes.tag: ENA last update
attributes.value: 2020-12-15
attributes.tag: External Id
attributes.value: SAMEA7723390
attributes.tag: INSDC center alias
attributes.value: UCSDMI
attributes.tag: INSDC center name
attributes.value: University of California San Diego Microbiome Initiative
attributes.tag: INSDC first public
attributes.value: 2020-12-17T04:08:05Z
attributes.tag: INSDC last update
attributes.value: 2020-12-15T22:06:58Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13114:13114.angenent.65.s005
attributes.tag: alpha_shotgun_woltka_faithspd
attributes.value: 144.5528776640933
attributes.tag: alpha_shotgun_woltka_min10k_faithspd
attributes.value: 144.5528776640933
attributes.tag: alpha_shotgun_woltka_min10k_richness
attributes.value: 788.0
attributes.tag: alpha_shotgun_woltka_min10k_shannon
attributes.value: 3.934924502507544
attributes.tag: alpha_shotgun_woltka_min3450_faithspd
attributes.value: 72.01594819
attributes.tag: alpha_shotgun_woltka_min3450_richness
attributes.value: 390.0
attributes.tag: alpha_shotgun_woltka_min3450_shannon
attributes.value: 3.178508864
attributes.tag: alpha_shotgun_woltka_rar10k_faithspd
attributes.value: 50.22961466305425
attributes.tag: alpha_shotgun_woltka_rar10k_richness
attributes.value: 186.0
attributes.tag: alpha_shotgun_woltka_rar10k_shannon
attributes.value: 3.9260344276640717
attributes.tag: alpha_shotgun_woltka_rar3450_faithspd
attributes.value: 19.3422969
attributes.tag: alpha_shotgun_woltka_rar3450_richness
attributes.value: 72.0
attributes.tag: alpha_shotgun_woltka_rar3450_shannon
attributes.value: 3.127986121
attributes.tag: alpha_shotgun_woltka_richness
attributes.value: 788.0
attributes.tag: alpha_shotgun_woltka_shannon
attributes.value: 3.934924502507544
attributes.tag: barcode_prefix
attributes.value: angenent.65.s005
attributes.tag: collection_timestamp
attributes.value: 7/13/15 0:00
attributes.tag: elevation
attributes.value: 123
attributes.tag: emp500_principal_investigator
attributes.value: Angenent
attributes.tag: emp500_study_id
attributes.value: 65
attributes.tag: emp500_title
attributes.value: Rumen animals and bioreactor
attributes.tag: empo_0
attributes.value: EMP sample
attributes.tag: empo_1
attributes.value: Host-associated
attributes.tag: empo_2
attributes.value: Animal
attributes.tag: empo_3
attributes.value: Animal proximal gut
attributes.tag: env biome
attributes.value: urban biome
attributes.tag: env feature
attributes.value: anaerobic bioreactor
attributes.tag: env package
attributes.value: wastewater/sludge
attributes.tag: env_material
attributes.value: anaerobic sludge
attributes.tag: environmental_package
attributes.value: host-associated
attributes.tag: gcms_analysis_batch
attributes.value: note applicable
attributes.tag: gcms_run_location
attributes.value: UCSD
attributes.tag: gcms_sample_name
attributes.value: EMP_Feces_angenent_65_s005_a03_M_187
attributes.tag: gcms_sequence
attributes.value: 187
attributes.tag: geo loc name
attributes.value: USA: State of New York,City of Ithaca
attributes.tag: host subject id
attributes.value: LTA.misc.1538
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: latitude
attributes.value: 42.44
attributes.tag: lcms_batch
attributes.value: 5.00
attributes.tag: lcms_extraction_protocol
attributes.value: Bulk_201901_UCSD
attributes.tag: lcms_position
attributes.value: 5A6
attributes.tag: lcms_replicate
attributes.value: no
attributes.tag: lcms_sample_name_cmn
attributes.value: 5A6_2_19_angenent-65-s005-a04
attributes.tag: lcms_sample_name_fbmn
attributes.value: 5A6_2_19_angenent-65-s005-a04.mzML
attributes.tag: lcms_sample_type
attributes.value: Sample
attributes.tag: lcms_sample_type_sub
attributes.value: Bulk
attributes.tag: longitude
attributes.value: -76.5
attributes.tag: original sample id
attributes.value: Angenent65.misc.1538
attributes.tag: physical_specimen_location
attributes.value: UCSD Knight Lab Freezer I
attributes.tag: physical_specimen_remaining
attributes.value: TRUE
attributes.tag: project name
attributes.value: Corn Beer Fermentation Bioreactor
attributes.tag: read_count_shotgun_r1
attributes.value: 4697336.0
attributes.tag: read_count_shotgun_rep200
attributes.value: 1473829.0
attributes.tag: read_count_shotgun_woltka_uniq
attributes.value: 884685.0
attributes.tag: sample name
attributes.value: qiita_sid_13114:13114.angenent.65.s005
attributes.tag: sample type
attributes.value: bioreactor sludge
attributes.tag: sample_name_original
attributes.value: Angenent65.misc.1538
attributes.tag: sample_name_plus_plate
attributes.value: 1.Angenent65.misc.1538
attributes.tag: sampling method
attributes.value: bulk
attributes.tag: songbird_train_empo_3
attributes.value: Train
attributes.tag: study_sample_number
attributes.value: 5