title: 13114.rohwer.85.s019
organism: marine sediment metagenome
description: sediment from Iberian Abyssal Plain
attributes.tag: ENA first public
attributes.value: 2020-12-17
attributes.tag: ENA last update
attributes.value: 2020-12-15
attributes.tag: External Id
attributes.value: SAMEA7723490
attributes.tag: INSDC center alias
attributes.value: UCSDMI
attributes.tag: INSDC center name
attributes.value: University of California San Diego Microbiome Initiative
attributes.tag: INSDC first public
attributes.value: 2020-12-17T04:08:05Z
attributes.tag: INSDC last update
attributes.value: 2020-12-15T22:07:07Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13114:13114.rohwer.85.s019
attributes.tag: alpha_shotgun_woltka_faithspd
attributes.value: 147.98975687637903
attributes.tag: alpha_shotgun_woltka_min10k_faithspd
attributes.value: 147.06465746656067
attributes.tag: alpha_shotgun_woltka_min10k_richness
attributes.value: 1000.0
attributes.tag: alpha_shotgun_woltka_min10k_shannon
attributes.value: 4.5410445164820095
attributes.tag: alpha_shotgun_woltka_min3450_faithspd
attributes.value: 91.27823997
attributes.tag: alpha_shotgun_woltka_min3450_richness
attributes.value: 601.0
attributes.tag: alpha_shotgun_woltka_min3450_shannon
attributes.value: 4.239071864
attributes.tag: alpha_shotgun_woltka_rar10k_faithspd
attributes.value: 43.76321258780513
attributes.tag: alpha_shotgun_woltka_rar10k_richness
attributes.value: 258.0
attributes.tag: alpha_shotgun_woltka_rar10k_shannon
attributes.value: 4.433907498370912
attributes.tag: alpha_shotgun_woltka_rar3450_faithspd
attributes.value: 22.43187987
attributes.tag: alpha_shotgun_woltka_rar3450_richness
attributes.value: 132.0
attributes.tag: alpha_shotgun_woltka_rar3450_shannon
attributes.value: 4.155574352
attributes.tag: alpha_shotgun_woltka_richness
attributes.value: 1001.0
attributes.tag: alpha_shotgun_woltka_shannon
attributes.value: 4.541581477915049
attributes.tag: barcode_prefix
attributes.value: rohwer.85.s019
attributes.tag: collection_timestamp
attributes.value: not provided
attributes.tag: core
attributes.value: 75
attributes.tag: depth_sample
attributes.value: 5036.8
attributes.tag: elevation
attributes.value: 0
attributes.tag: emp500_principal_investigator
attributes.value: Rohwer
attributes.tag: emp500_study_id
attributes.value: 85
attributes.tag: emp500_title
attributes.value: Iberia and Guatemala deep-sea sediments
attributes.tag: empo_0
attributes.value: EMP sample
attributes.tag: empo_1
attributes.value: Free-living
attributes.tag: empo_2
attributes.value: Saline
attributes.tag: empo_3
attributes.value: Sediment (saline)
attributes.tag: env biome
attributes.value: marine benthic biome
attributes.tag: env feature
attributes.value: marine benthic feature
attributes.tag: env package
attributes.value: sediment
attributes.tag: env_material
attributes.value: sediment
attributes.tag: environmental_package
attributes.value: sediment
attributes.tag: geo loc name
attributes.value: Atlantic Ocean:Northeast Atlantic Ocean,Iberian Abyssal Plain
attributes.tag: hole
attributes.value: A
attributes.tag: host subject id
attributes.value: AP19
attributes.tag: interval
attributes.value: 19
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: latitude
attributes.value: 46.68323333
attributes.tag: lcms_batch
attributes.value: 2.00
attributes.tag: lcms_extraction_protocol
attributes.value: Bulk_201901_UCSD
attributes.tag: lcms_position
attributes.value: 2C10
attributes.tag: lcms_replicate
attributes.value: no
attributes.tag: lcms_sample_name_cmn
attributes.value: 2C10_4_15_rohwer-85-s019-a03
attributes.tag: lcms_sample_name_fbmn
attributes.value: 2C10_4_15_rohwer-85-s019-a03.mzML
attributes.tag: lcms_sample_type
attributes.value: Sample
attributes.tag: lcms_sample_type_sub
attributes.value: Bulk
attributes.tag: leg
attributes.value: 149
attributes.tag: longitude
attributes.value: -11.6042
attributes.tag: mbsf
attributes.value: 701.1
attributes.tag: mbsf2
attributes.value: 710.4
attributes.tag: notes
attributes.value: http://www-odp.tamu.edu/publications/149_IR/chap_07/chap_07.htm
attributes.tag: original sample id
attributes.value: Rohwer85.deep.sediment.AP19
attributes.tag: physical_specimen_location
attributes.value: UCSD Knight Lab Freezer I
attributes.tag: physical_specimen_remaining
attributes.value: TRUE
attributes.tag: project name
attributes.value: Deep marine sediments
attributes.tag: read_count_shotgun_r1
attributes.value: 12981532.0
attributes.tag: read_count_shotgun_rep200
attributes.value: 5182687.0
attributes.tag: read_count_shotgun_woltka_uniq
attributes.value: 2306130.0
attributes.tag: sample name
attributes.value: qiita_sid_13114:13114.rohwer.85.s019
attributes.tag: sample type
attributes.value: sediment
attributes.tag: sample_name_original
attributes.value: Rohwer85.deep.sediment.AP19
attributes.tag: sample_name_plus_plate
attributes.value: 3.Rohwer85.deep.sediment.AP19
attributes.tag: sampling method
attributes.value: bulk
attributes.tag: section
attributes.value: 02W
attributes.tag: site name
attributes.value: 900
attributes.tag: songbird_train_empo_3
attributes.value: Train
attributes.tag: study_sample_number
attributes.value: 19
attributes.tag: tier
attributes.value: 2