title: 13114.pinto.63.s019
organism: insect metagenome
description: Nectar and sweet deposits form plants that are gathered, modified and stored by honeybees
attributes.tag: ENA first public
attributes.value: 2020-12-17
attributes.tag: ENA last update
attributes.value: 2020-12-15
attributes.tag: External Id
attributes.value: SAMEA7723469
attributes.tag: INSDC center alias
attributes.value: UCSDMI
attributes.tag: INSDC center name
attributes.value: University of California San Diego Microbiome Initiative
attributes.tag: INSDC first public
attributes.value: 2020-12-17T04:08:05Z
attributes.tag: INSDC last update
attributes.value: 2020-12-15T22:07:06Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13114:13114.pinto.63.s019
attributes.tag: alpha_shotgun_woltka_faithspd
attributes.value: 88.68995071215545
attributes.tag: alpha_shotgun_woltka_min10k_faithspd
attributes.value: 88.20688010666277
attributes.tag: alpha_shotgun_woltka_min10k_richness
attributes.value: 564.0
attributes.tag: alpha_shotgun_woltka_min10k_shannon
attributes.value: 1.9035175911481088
attributes.tag: alpha_shotgun_woltka_min3450_faithspd
attributes.value: 48.99800697
attributes.tag: alpha_shotgun_woltka_min3450_richness
attributes.value: 267.0
attributes.tag: alpha_shotgun_woltka_min3450_shannon
attributes.value: 1.704429261
attributes.tag: alpha_shotgun_woltka_rar10k_faithspd
attributes.value: 21.4842415309613
attributes.tag: alpha_shotgun_woltka_rar10k_richness
attributes.value: 128.0
attributes.tag: alpha_shotgun_woltka_rar10k_shannon
attributes.value: 1.928907694241908
attributes.tag: alpha_shotgun_woltka_rar3450_faithspd
attributes.value: 16.48110166
attributes.tag: alpha_shotgun_woltka_rar3450_richness
attributes.value: 83.0
attributes.tag: alpha_shotgun_woltka_rar3450_shannon
attributes.value: 1.666458985
attributes.tag: alpha_shotgun_woltka_richness
attributes.value: 566.0
attributes.tag: alpha_shotgun_woltka_shannon
attributes.value: 1.9035766130727607
attributes.tag: barcode_prefix
attributes.value: pinto.63.s019
attributes.tag: collection_timestamp
attributes.value: 5/21/16 10:23
attributes.tag: depth_sample
attributes.value: 0
attributes.tag: elevation
attributes.value: 68
attributes.tag: emp500_principal_investigator
attributes.value: Pinto
attributes.tag: emp500_study_id
attributes.value: 63
attributes.tag: emp500_title
attributes.value: Costa Rican leaf-cutter ant and bee material
attributes.tag: empo_0
attributes.value: EMP sample
attributes.tag: empo_1
attributes.value: Host-associated
attributes.tag: empo_2
attributes.value: Plant
attributes.tag: empo_3
attributes.value: Plant corpus
attributes.tag: env biome
attributes.value: tropical broadleaf forest biome
attributes.tag: env feature
attributes.value: insecta-associated habitat
attributes.tag: env package
attributes.value: host-associated
attributes.tag: env_material
attributes.value: organic material
attributes.tag: environmental_package
attributes.value: host-associated
attributes.tag: gcms_analysis_batch
attributes.value: note applicable
attributes.tag: gcms_run_location
attributes.value: UCSD
attributes.tag: gcms_sample_name
attributes.value: EMP_Feces_pinto_63_s019_a03_M_340
attributes.tag: gcms_sequence
attributes.value: 340
attributes.tag: geo loc name
attributes.value: Costa Rica:Puerto Viejo,La Selva Biological Station
attributes.tag: host common name
attributes.value: Mariaseca
attributes.tag: host sex
attributes.value: female
attributes.tag: host subject id
attributes.value: honey.11
attributes.tag: host taxid
attributes.value: 166442
attributes.tag: host_substrate
attributes.value: wooden boxes
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: latitude
attributes.value: 10.43087
attributes.tag: lcms_batch
attributes.value: 4.00
attributes.tag: lcms_extraction_protocol
attributes.value: Bulk_201901_UCSD
attributes.tag: lcms_position
attributes.value: 4A4
attributes.tag: lcms_replicate
attributes.value: no
attributes.tag: lcms_sample_name_cmn
attributes.value: 4A4_2_21_pinto-63-s019-a04
attributes.tag: lcms_sample_name_fbmn
attributes.value: 4A4_2_21_pinto-63-s019-a04.mzML
attributes.tag: lcms_sample_type
attributes.value: Sample
attributes.tag: lcms_sample_type_sub
attributes.value: Bulk
attributes.tag: longitude
attributes.value: -84.00718
attributes.tag: original sample id
attributes.value: Pinto63.honey.11
attributes.tag: physical_specimen_location
attributes.value: UCSD Knight Lab Freezer I
attributes.tag: physical_specimen_remaining
attributes.value: TRUE
attributes.tag: project name
attributes.value: Pinto insects from Costa Rica: bees, leaf-cutter ants
attributes.tag: read_count_shotgun_r1
attributes.value: 9613892.0
attributes.tag: read_count_shotgun_rep200
attributes.value: 1509584.0
attributes.tag: read_count_shotgun_woltka_uniq
attributes.value: 952192.0
attributes.tag: samp_store_temp
attributes.value: -80
attributes.tag: sample name
attributes.value: qiita_sid_13114:13114.pinto.63.s019
attributes.tag: sample type
attributes.value: honey
attributes.tag: sample_name_original
attributes.value: Pinto63.honey.11
attributes.tag: sample_name_plus_plate
attributes.value: 7.Pinto63.honey.11
attributes.tag: sampling method
attributes.value: bulk
attributes.tag: songbird_train_empo_3
attributes.value: Test
attributes.tag: study_sample_number
attributes.value: 19
attributes.tag: tier
attributes.value: 1