title: 13114.mayer.33.s001
organism: freshwater sediment metagenome
description: playa sample 14645
attributes.tag: ENA first public
attributes.value: 2020-12-17
attributes.tag: ENA last update
attributes.value: 2020-12-15
attributes.tag: External Id
attributes.value: SAMEA7723611
attributes.tag: INSDC center alias
attributes.value: UCSDMI
attributes.tag: INSDC center name
attributes.value: University of California San Diego Microbiome Initiative
attributes.tag: INSDC first public
attributes.value: 2020-12-17T04:08:04Z
attributes.tag: INSDC last update
attributes.value: 2020-12-15T23:55:47Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13114:13114.mayer.33.s001
attributes.tag: alpha_shotgun_woltka_faithspd
attributes.value: 282.08101906477435
attributes.tag: alpha_shotgun_woltka_min10k_faithspd
attributes.value: 281.523847603602
attributes.tag: alpha_shotgun_woltka_min10k_richness
attributes.value: 2051.0
attributes.tag: alpha_shotgun_woltka_min10k_shannon
attributes.value: 7.199462883036777
attributes.tag: alpha_shotgun_woltka_min3450_faithspd
attributes.value: 158.81203080000003
attributes.tag: alpha_shotgun_woltka_min3450_richness
attributes.value: 1201.0
attributes.tag: alpha_shotgun_woltka_min3450_shannon
attributes.value: 6.635619687
attributes.tag: alpha_shotgun_woltka_rar10k_faithspd
attributes.value: 137.62350668119578
attributes.tag: alpha_shotgun_woltka_rar10k_richness
attributes.value: 915.0
attributes.tag: alpha_shotgun_woltka_rar10k_shannon
attributes.value: 7.148418204564145
attributes.tag: alpha_shotgun_woltka_rar3450_faithspd
attributes.value: 70.77694271
attributes.tag: alpha_shotgun_woltka_rar3450_richness
attributes.value: 439.0
attributes.tag: alpha_shotgun_woltka_rar3450_shannon
attributes.value: 6.539616044
attributes.tag: alpha_shotgun_woltka_richness
attributes.value: 2055.0
attributes.tag: alpha_shotgun_woltka_shannon
attributes.value: 7.2014707519955765
attributes.tag: ammonium_mg_per_l
attributes.value: 0.5
attributes.tag: barcode_prefix
attributes.value: mayer.33.s001
attributes.tag: collection_timestamp
attributes.value: 1/12/16 0:00
attributes.tag: depth_sample
attributes.value: 0.05
attributes.tag: elevation
attributes.value: 1189
attributes.tag: emp500_principal_investigator
attributes.value: Mayer
attributes.tag: emp500_study_id
attributes.value: 33
attributes.tag: emp500_title
attributes.value: West Texas playa
attributes.tag: empo_0
attributes.value: EMP sample
attributes.tag: empo_1
attributes.value: Free-living
attributes.tag: empo_2
attributes.value: Non-saline
attributes.tag: empo_3
attributes.value: Sediment (non-saline)
attributes.tag: env biome
attributes.value: grassland biome
attributes.tag: env feature
attributes.value: intermittent pond
attributes.tag: env package
attributes.value: sediment
attributes.tag: env_material
attributes.value: lake sediment
attributes.tag: environmental_package
attributes.value: sediment
attributes.tag: gcms_analysis_batch
attributes.value: note applicable
attributes.tag: gcms_run_location
attributes.value: UCSD
attributes.tag: gcms_sample_name
attributes.value: EMP_Feces_mayer_33_s001_a03_M_194
attributes.tag: gcms_sequence
attributes.value: 194
attributes.tag: geo loc name
attributes.value: USA: State of Texas,Deaf Smith County
attributes.tag: host subject id
attributes.value: 14645
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: latitude
attributes.value: 34.604825
attributes.tag: lcms_batch
attributes.value: 1.00
attributes.tag: lcms_extraction_protocol
attributes.value: Bulk_201901_UCSD
attributes.tag: lcms_position
attributes.value: 1H1
attributes.tag: lcms_replicate
attributes.value: no
attributes.tag: lcms_sample_name_cmn
attributes.value: 1H1_3_10_mayer-33-s001-a04
attributes.tag: lcms_sample_name_fbmn
attributes.value: 1H1_3_10_mayer-33-s001-a04.mzML
attributes.tag: lcms_sample_type
attributes.value: Sample
attributes.tag: lcms_sample_type_sub
attributes.value: Bulk
attributes.tag: longitude
attributes.value: -102.419386
attributes.tag: original sample id
attributes.value: Mayer33.sediment.1
attributes.tag: oxygen_mg_per_l
attributes.value: 9.8
attributes.tag: ph
attributes.value: 7.78
attributes.tag: physical_specimen_location
attributes.value: UCSD Knight Lab Freezer I and MayerLab -80 Room 212
attributes.tag: physical_specimen_remaining
attributes.value: TRUE
attributes.tag: project name
attributes.value: West Texas Playa
attributes.tag: read_count_shotgun_r1
attributes.value: 13444186.0
attributes.tag: read_count_shotgun_rep200
attributes.value: 380699.0
attributes.tag: read_count_shotgun_woltka_uniq
attributes.value: 134836.0
attributes.tag: salinity_psu
attributes.value: 0.12
attributes.tag: sample name
attributes.value: qiita_sid_13114:13114.mayer.33.s001
attributes.tag: sample type
attributes.value: sediment
attributes.tag: sample_name_original
attributes.value: Mayer33.sediment.1
attributes.tag: sample_name_plus_plate
attributes.value: 1.Mayer33.sediment.1
attributes.tag: sampling method
attributes.value: bulk
attributes.tag: songbird_train_empo_3
attributes.value: Test
attributes.tag: study_sample_number
attributes.value: 1
attributes.tag: temperature_deg_c
attributes.value: 5.4