title: 13114.metcalf.40.s011
organism: soil metagenome
description: 10141.G.soil.T4.1
attributes.tag: ENA first public
attributes.value: 2020-12-17
attributes.tag: ENA last update
attributes.value: 2020-12-15
attributes.tag: External Id
attributes.value: SAMEA7723450
attributes.tag: INSDC center alias
attributes.value: UCSDMI
attributes.tag: INSDC center name
attributes.value: University of California San Diego Microbiome Initiative
attributes.tag: INSDC first public
attributes.value: 2020-12-17T04:08:05Z
attributes.tag: INSDC last update
attributes.value: 2020-12-15T22:07:04Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13114:13114.metcalf.40.s011
attributes.tag: alpha_shotgun_woltka_faithspd
attributes.value: 212.46194348789368
attributes.tag: alpha_shotgun_woltka_min10k_faithspd
attributes.value: 211.9861424046344
attributes.tag: alpha_shotgun_woltka_min10k_richness
attributes.value: 1614.0
attributes.tag: alpha_shotgun_woltka_min10k_shannon
attributes.value: 4.448733654072322
attributes.tag: alpha_shotgun_woltka_min3450_faithspd
attributes.value: 141.27381709999997
attributes.tag: alpha_shotgun_woltka_min3450_richness
attributes.value: 1074.0
attributes.tag: alpha_shotgun_woltka_min3450_shannon
attributes.value: 3.998465473
attributes.tag: alpha_shotgun_woltka_rar10k_faithspd
attributes.value: 62.630314660479144
attributes.tag: alpha_shotgun_woltka_rar10k_richness
attributes.value: 383.0
attributes.tag: alpha_shotgun_woltka_rar10k_shannon
attributes.value: 4.355379076484
attributes.tag: alpha_shotgun_woltka_rar3450_faithspd
attributes.value: 31.61868846
attributes.tag: alpha_shotgun_woltka_rar3450_richness
attributes.value: 182.0
attributes.tag: alpha_shotgun_woltka_rar3450_shannon
attributes.value: 3.898021913
attributes.tag: alpha_shotgun_woltka_richness
attributes.value: 1615.0
attributes.tag: alpha_shotgun_woltka_shannon
attributes.value: 4.44875523624298
attributes.tag: barcode_prefix
attributes.value: metcalf.40.s011
attributes.tag: collection_timestamp
attributes.value: 6/12/12 0:00
attributes.tag: depth_sample
attributes.value: 0
attributes.tag: elevation
attributes.value: 1624.1
attributes.tag: emp500_principal_investigator
attributes.value: Metcalf
attributes.tag: emp500_study_id
attributes.value: 40
attributes.tag: emp500_title
attributes.value: Mouse decomposition soil
attributes.tag: empo_0
attributes.value: EMP sample
attributes.tag: empo_1
attributes.value: Free-living
attributes.tag: empo_2
attributes.value: Non-saline
attributes.tag: empo_3
attributes.value: Soil (non-saline)
attributes.tag: env biome
attributes.value: temperate grassland biome
attributes.tag: env feature
attributes.value: grassland soil
attributes.tag: env package
attributes.value: soil
attributes.tag: env_material
attributes.value: soil
attributes.tag: environmental_package
attributes.value: soil
attributes.tag: experimental_factor
attributes.value: soil type
attributes.tag: gcms_analysis_batch
attributes.value: note applicable
attributes.tag: gcms_run_location
attributes.value: UCSD
attributes.tag: gcms_sample_name
attributes.value: EMP_Feces_metcalf_40_s011_a03_M_074
attributes.tag: gcms_sequence
attributes.value: 074
attributes.tag: geo loc name
attributes.value: USA: State of Colorado,City of Boulder
attributes.tag: harvest_event
attributes.value: T4
attributes.tag: harvest_time_days
attributes.value: 15
attributes.tag: host subject id
attributes.value: G.soil.T4.1
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: latitude
attributes.value: 40.015
attributes.tag: lcms_batch
attributes.value: 1.00
attributes.tag: lcms_extraction_protocol
attributes.value: Bulk_201901_UCSD
attributes.tag: lcms_position
attributes.value: 1A9
attributes.tag: lcms_replicate
attributes.value: no
attributes.tag: lcms_sample_name_cmn
attributes.value: 1A9_1_11_metcalf-40-s011-a04
attributes.tag: lcms_sample_name_fbmn
attributes.value: 1A9_1_11_metcalf-40-s011-a04.mzML
attributes.tag: lcms_sample_type
attributes.value: Sample
attributes.tag: lcms_sample_type_sub
attributes.value: Bulk
attributes.tag: longitude
attributes.value: -105.27
attributes.tag: original sample id
attributes.value: Metcalf40.10141.G.soil.T4.1
attributes.tag: ph
attributes.value: 8.773333333
attributes.tag: physical_specimen_location
attributes.value: UCSD Knight Lab Freezer I
attributes.tag: physical_specimen_remaining
attributes.value: TRUE
attributes.tag: project name
attributes.value: Mouse decomposition experiment on contrasting soil types
attributes.tag: read_count_shotgun_r1
attributes.value: 13379692.0
attributes.tag: read_count_shotgun_rep200
attributes.value: 1557881.0
attributes.tag: read_count_shotgun_woltka_uniq
attributes.value: 766457.0
attributes.tag: sample name
attributes.value: qiita_sid_13114:13114.metcalf.40.s011
attributes.tag: sample type
attributes.value: soil
attributes.tag: sample_name_original
attributes.value: Metcalf40.10141.G.soil.T4.1
attributes.tag: sample_name_plus_plate
attributes.value: 4.Metcalf40.10141.G.soil.T4.1
attributes.tag: sampling method
attributes.value: bulk
attributes.tag: soil type
attributes.value: grassland
attributes.tag: soil_ctrl
attributes.value: w_corpse
attributes.tag: songbird_train_empo_3
attributes.value: Test
attributes.tag: study_sample_number
attributes.value: 11
attributes.tag: temperature_deg_c
attributes.value: not provided
attributes.tag: tier
attributes.value: 1
attributes.tag: weight
attributes.value: 32.66