title: 13114.mcmahon.21.s009
organism: activated sludge metagenome
description: Total biomass from Enhanced Biological Phosphorus Removal bioreactor
attributes.tag: ENA first public
attributes.value: 2020-12-17
attributes.tag: ENA last update
attributes.value: 2020-12-15
attributes.tag: External Id
attributes.value: SAMEA7723443
attributes.tag: INSDC center alias
attributes.value: UCSDMI
attributes.tag: INSDC center name
attributes.value: University of California San Diego Microbiome Initiative
attributes.tag: INSDC first public
attributes.value: 2020-12-17T04:08:05Z
attributes.tag: INSDC last update
attributes.value: 2020-12-15T22:07:03Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13114:13114.mcmahon.21.s009
attributes.tag: alpha_shotgun_woltka_faithspd
attributes.value: 149.86050290429876
attributes.tag: alpha_shotgun_woltka_min10k_faithspd
attributes.value: 149.86050290429876
attributes.tag: alpha_shotgun_woltka_min10k_richness
attributes.value: 1115.0
attributes.tag: alpha_shotgun_woltka_min10k_shannon
attributes.value: 2.744226864580689
attributes.tag: alpha_shotgun_woltka_min3450_faithspd
attributes.value: 93.43866584
attributes.tag: alpha_shotgun_woltka_min3450_richness
attributes.value: 728.0
attributes.tag: alpha_shotgun_woltka_min3450_shannon
attributes.value: 2.336384175
attributes.tag: alpha_shotgun_woltka_rar10k_faithspd
attributes.value: 43.42354912309384
attributes.tag: alpha_shotgun_woltka_rar10k_richness
attributes.value: 241.0
attributes.tag: alpha_shotgun_woltka_rar10k_shannon
attributes.value: 2.7052016014960256
attributes.tag: alpha_shotgun_woltka_rar3450_faithspd
attributes.value: 21.20068113
attributes.tag: alpha_shotgun_woltka_rar3450_richness
attributes.value: 109.0
attributes.tag: alpha_shotgun_woltka_rar3450_shannon
attributes.value: 2.223642438
attributes.tag: alpha_shotgun_woltka_richness
attributes.value: 1115.0
attributes.tag: alpha_shotgun_woltka_shannon
attributes.value: 2.744226864580689
attributes.tag: ammonium_mg_per_l
attributes.value: not provided
attributes.tag: barcode_prefix
attributes.value: mcmahon.21.s009
attributes.tag: collection_timestamp
attributes.value: 3/10/16 0:00
attributes.tag: elevation
attributes.value: 226
attributes.tag: emp500_principal_investigator
attributes.value: McMahon
attributes.tag: emp500_study_id
attributes.value: 21
attributes.tag: emp500_title
attributes.value: Bioreactors for wastewater and anammox
attributes.tag: empo_0
attributes.value: EMP sample
attributes.tag: empo_1
attributes.value: Free-living
attributes.tag: empo_2
attributes.value: Non-saline
attributes.tag: empo_3
attributes.value: Water (non-saline)
attributes.tag: env biome
attributes.value: urban biome
attributes.tag: env feature
attributes.value: bioreactor
attributes.tag: env package
attributes.value: wastewater/sludge
attributes.tag: env_material
attributes.value: biosolids
attributes.tag: environmental_package
attributes.value: wastewater/sludge
attributes.tag: geo loc name
attributes.value: USA:UT
attributes.tag: host subject id
attributes.value: EBPR.R3.AERi
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: latitude
attributes.value: 43.078418
attributes.tag: lcms_batch
attributes.value: 3.00
attributes.tag: lcms_extraction_protocol
attributes.value: Bulk_201901_UCSD
attributes.tag: lcms_position
attributes.value: 3A3
attributes.tag: lcms_replicate
attributes.value: no
attributes.tag: lcms_sample_name_cmn
attributes.value: 3A3_3_73_mcmahon-21-s009-a03
attributes.tag: lcms_sample_name_fbmn
attributes.value: 3A3_3_73_mcmahon-21-s009-a03.mzML
attributes.tag: lcms_sample_type
attributes.value: Sample
attributes.tag: lcms_sample_type_sub
attributes.value: Bulk
attributes.tag: longitude
attributes.value: -89.386482
attributes.tag: nitrate_mg_per_l
attributes.value: not provided
attributes.tag: nitrite_mg_per_l
attributes.value: not provided
attributes.tag: original sample id
attributes.value: McMahon21.EBPR.R3.AERi
attributes.tag: oxy_stat_samp
attributes.value: aerobic
attributes.tag: ph
attributes.value: 7.9
attributes.tag: physical_specimen_location
attributes.value: UCSD Knight Lab Freezer I
attributes.tag: physical_specimen_remaining
attributes.value: TRUE
attributes.tag: project name
attributes.value: Total Nutrient Removal bioreactor
attributes.tag: read_count_shotgun_r1
attributes.value: 16094738.0
attributes.tag: read_count_shotgun_rep200
attributes.value: 762945.0
attributes.tag: read_count_shotgun_woltka_uniq
attributes.value: 1161224.0
attributes.tag: sample name
attributes.value: qiita_sid_13114:13114.mcmahon.21.s009
attributes.tag: sample type
attributes.value: bioreactor biomass
attributes.tag: sample_name_original
attributes.value: McMahon21.EBPR.R3.AERi
attributes.tag: sample_name_plus_plate
attributes.value: 1.McMahon21.EBPR.R3.AERi
attributes.tag: sampling method
attributes.value: bulk
attributes.tag: songbird_train_empo_3
attributes.value: Train
attributes.tag: study_sample_number
attributes.value: 9
attributes.tag: temperature_deg_c
attributes.value: 21
attributes.tag: tier
attributes.value: 1