title: 13114.mousseau.88.s009
organism: gut metagenome
description: Chernobyl vole feces mousseau.88.s009
attributes.tag: ENA first public
attributes.value: 2020-12-17
attributes.tag: ENA last update
attributes.value: 2020-12-15
attributes.tag: External Id
attributes.value: SAMEA7723621
attributes.tag: INSDC center alias
attributes.value: UCSDMI
attributes.tag: INSDC center name
attributes.value: University of California San Diego Microbiome Initiative
attributes.tag: INSDC first public
attributes.value: 2020-12-17T04:08:04Z
attributes.tag: INSDC last update
attributes.value: 2020-12-15T23:55:48Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13114:13114.mousseau.88.s009
attributes.tag: alpha_shotgun_woltka_faithspd
attributes.value: 70.28716194476577
attributes.tag: alpha_shotgun_woltka_min10k_faithspd
attributes.value: 70.28716194476577
attributes.tag: alpha_shotgun_woltka_min10k_richness
attributes.value: 279.0
attributes.tag: alpha_shotgun_woltka_min10k_shannon
attributes.value: 5.394118083917321
attributes.tag: alpha_shotgun_woltka_min3450_faithspd
attributes.value: 55.41055443
attributes.tag: alpha_shotgun_woltka_min3450_richness
attributes.value: 213.0
attributes.tag: alpha_shotgun_woltka_min3450_shannon
attributes.value: 5.172772817
attributes.tag: alpha_shotgun_woltka_rar10k_faithspd
attributes.value: 69.39825098901633
attributes.tag: alpha_shotgun_woltka_rar10k_richness
attributes.value: 275.0
attributes.tag: alpha_shotgun_woltka_rar10k_shannon
attributes.value: 5.400305860284755
attributes.tag: alpha_shotgun_woltka_rar3450_faithspd
attributes.value: 45.87022895
attributes.tag: alpha_shotgun_woltka_rar3450_richness
attributes.value: 167.0
attributes.tag: alpha_shotgun_woltka_rar3450_shannon
attributes.value: 5.132229811
attributes.tag: alpha_shotgun_woltka_richness
attributes.value: 279.0
attributes.tag: alpha_shotgun_woltka_shannon
attributes.value: 5.394118083917321
attributes.tag: barcode_prefix
attributes.value: mousseau.88.s009
attributes.tag: collection_timestamp
attributes.value: 5/27/16 14:40
attributes.tag: elevation
attributes.value: 113.1
attributes.tag: emp500_principal_investigator
attributes.value: Mousseau
attributes.tag: emp500_study_id
attributes.value: 88
attributes.tag: emp500_title
attributes.value: Chernobyl vole feces
attributes.tag: empo_0
attributes.value: EMP sample
attributes.tag: empo_1
attributes.value: Host-associated
attributes.tag: empo_2
attributes.value: Animal
attributes.tag: empo_3
attributes.value: Animal distal gut
attributes.tag: env biome
attributes.value: temperate mixed forest biome
attributes.tag: env feature
attributes.value: host-associated habitat
attributes.tag: env package
attributes.value: host-associated
attributes.tag: env_material
attributes.value: feces
attributes.tag: environmental_package
attributes.value: host-associated
attributes.tag: experiment_code
attributes.value: Ch 2016
attributes.tag: experimental_factor
attributes.value: radiation level
attributes.tag: geo loc name
attributes.value: Ukraine:City of Chernobyl
attributes.tag: host body habitat
attributes.value: UBERON:feces
attributes.tag: host body product
attributes.value: UBERON:feces
attributes.tag: host body site
attributes.value: UBERON:feces
attributes.tag: host class
attributes.value: Mammalia
attributes.tag: host common name
attributes.value: bank vole
attributes.tag: host diet
attributes.value: herbivore/insectivore
attributes.tag: host length mm
attributes.value: 92.39
attributes.tag: host order
attributes.value: Rodentia
attributes.tag: host scientific name
attributes.value: Myodes glareolus
attributes.tag: host sex
attributes.value: male
attributes.tag: host state
attributes.value: ad
attributes.tag: host subject id
attributes.value: 33
attributes.tag: host taxid
attributes.value: 447135
attributes.tag: host tot mass g
attributes.value: 20.63
attributes.tag: host treatment
attributes.value: clean
attributes.tag: host_family
attributes.value: Cricetidae
attributes.tag: host_flight
attributes.value: terrestrial, flightless
attributes.tag: host_head_width_mm
attributes.value: 12.18
attributes.tag: host_phylum
attributes.value: Chordata
attributes.tag: host_rad_gammaspec_raw_cps
attributes.value: 11.4
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: latitude
attributes.value: 51.162931
attributes.tag: lcms_batch
attributes.value: 5.00
attributes.tag: lcms_extraction_protocol
attributes.value: Bulk_201901_UCSD
attributes.tag: lcms_position
attributes.value: 5F5
attributes.tag: lcms_replicate
attributes.value: no
attributes.tag: lcms_sample_name_cmn
attributes.value: 5F5_4_31_mousseau-88-s009-a02
attributes.tag: lcms_sample_name_fbmn
attributes.value: 5F5_4_31_mousseau-88-s009-a02.mzML
attributes.tag: lcms_sample_type
attributes.value: Sample
attributes.tag: lcms_sample_type_sub
attributes.value: Bulk
attributes.tag: loc_rad_geiger_gamma_usv_per_h
attributes.value: 0.239
attributes.tag: location
attributes.value: 18
attributes.tag: location code
attributes.value: RT
attributes.tag: longitude
attributes.value: 30.001612
attributes.tag: original sample id
attributes.value: Mousseau88.FIN.33
attributes.tag: physical_specimen_location
attributes.value: UCSD Knight Lab Freezer I and University of Oulu, Finland
attributes.tag: physical_specimen_remaining
attributes.value: TRUE
attributes.tag: project name
attributes.value: Chernobyl Microbiome project_LA
attributes.tag: read_count_shotgun_r1
attributes.value: 3882824.0
attributes.tag: read_count_shotgun_rep200
attributes.value: 24234.0
attributes.tag: read_count_shotgun_woltka_uniq
attributes.value: 11406.0
attributes.tag: sample name
attributes.value: qiita_sid_13114:13114.mousseau.88.s009
attributes.tag: sample type
attributes.value: stool
attributes.tag: sample_mass_grams
attributes.value: 0.2
attributes.tag: sample_name_original
attributes.value: Mousseau88.FIN.33
attributes.tag: sample_name_plus_plate
attributes.value: 6.Mousseau88.FIN.33
attributes.tag: sampling method
attributes.value: bulk
attributes.tag: songbird_train_empo_3
attributes.value: Test
attributes.tag: store_cond
attributes.value: 90 days -80C
attributes.tag: study_sample_number
attributes.value: 9
attributes.tag: tier
attributes.value: 3
attributes.tag: trap
attributes.value: 7