title: 13114.mayer.33.s003
organism: freshwater sediment metagenome
description: playa sample 999
attributes.tag: ENA first public
attributes.value: 2020-12-17
attributes.tag: ENA last update
attributes.value: 2020-12-15
attributes.tag: External Id
attributes.value: SAMEA7723438
attributes.tag: INSDC center alias
attributes.value: UCSDMI
attributes.tag: INSDC center name
attributes.value: University of California San Diego Microbiome Initiative
attributes.tag: INSDC first public
attributes.value: 2020-12-17T04:08:05Z
attributes.tag: INSDC last update
attributes.value: 2020-12-15T22:07:03Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13114:13114.mayer.33.s003
attributes.tag: alpha_shotgun_woltka_faithspd
attributes.value: 197.32712687041658
attributes.tag: alpha_shotgun_woltka_min10k_faithspd
attributes.value: 196.7799169817199
attributes.tag: alpha_shotgun_woltka_min10k_richness
attributes.value: 1335.0
attributes.tag: alpha_shotgun_woltka_min10k_shannon
attributes.value: 7.4141012536770035
attributes.tag: alpha_shotgun_woltka_min3450_faithspd
attributes.value: 126.7324164
attributes.tag: alpha_shotgun_woltka_min3450_richness
attributes.value: 943.0
attributes.tag: alpha_shotgun_woltka_min3450_shannon
attributes.value: 7.032373033
attributes.tag: alpha_shotgun_woltka_rar10k_faithspd
attributes.value: 136.29621055259167
attributes.tag: alpha_shotgun_woltka_rar10k_richness
attributes.value: 861.0
attributes.tag: alpha_shotgun_woltka_rar10k_shannon
attributes.value: 7.355088648076974
attributes.tag: alpha_shotgun_woltka_rar3450_faithspd
attributes.value: 73.23431715
attributes.tag: alpha_shotgun_woltka_rar3450_richness
attributes.value: 465.0
attributes.tag: alpha_shotgun_woltka_rar3450_shannon
attributes.value: 6.858855794
attributes.tag: alpha_shotgun_woltka_richness
attributes.value: 1336.0
attributes.tag: alpha_shotgun_woltka_shannon
attributes.value: 7.414451400969073
attributes.tag: ammonium_mg_per_l
attributes.value: 0.25
attributes.tag: barcode_prefix
attributes.value: mayer.33.s003
attributes.tag: collection_timestamp
attributes.value: 1/12/16 0:00
attributes.tag: depth_sample
attributes.value: 0.05
attributes.tag: elevation
attributes.value: 1183
attributes.tag: emp500_principal_investigator
attributes.value: Mayer
attributes.tag: emp500_study_id
attributes.value: 33
attributes.tag: emp500_title
attributes.value: West Texas playa
attributes.tag: empo_0
attributes.value: EMP sample
attributes.tag: empo_1
attributes.value: Free-living
attributes.tag: empo_2
attributes.value: Non-saline
attributes.tag: empo_3
attributes.value: Sediment (non-saline)
attributes.tag: env biome
attributes.value: grassland biome
attributes.tag: env feature
attributes.value: intermittent pond
attributes.tag: env package
attributes.value: sediment
attributes.tag: env_material
attributes.value: lake sediment
attributes.tag: environmental_package
attributes.value: sediment
attributes.tag: gcms_analysis_batch
attributes.value: note applicable
attributes.tag: gcms_run_location
attributes.value: UCSD
attributes.tag: gcms_sample_name
attributes.value: EMP_Feces_mayer_33_s003_a03_M_196
attributes.tag: gcms_sequence
attributes.value: 196
attributes.tag: geo loc name
attributes.value: USA: State of Texas,Deaf Smith County
attributes.tag: host subject id
attributes.value: 999
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: latitude
attributes.value: 34.983962
attributes.tag: lcms_batch
attributes.value: 1.00
attributes.tag: lcms_extraction_protocol
attributes.value: Bulk_201901_UCSD
attributes.tag: lcms_position
attributes.value: 1H8
attributes.tag: lcms_replicate
attributes.value: no
attributes.tag: lcms_sample_name_cmn
attributes.value: 1H8_3_22_mayer-33-s003-a04
attributes.tag: lcms_sample_name_fbmn
attributes.value: 1H8_3_22_mayer-33-s003-a04.mzML
attributes.tag: lcms_sample_type
attributes.value: Sample
attributes.tag: lcms_sample_type_sub
attributes.value: Bulk
attributes.tag: longitude
attributes.value: -102.385234
attributes.tag: original sample id
attributes.value: Mayer33.sediment.3
attributes.tag: oxygen_mg_per_l
attributes.value: 8.38
attributes.tag: ph
attributes.value: 7.58
attributes.tag: physical_specimen_location
attributes.value: UCSD Knight Lab Freezer I and MayerLab -80 Room 212
attributes.tag: physical_specimen_remaining
attributes.value: TRUE
attributes.tag: project name
attributes.value: West Texas Playa
attributes.tag: read_count_shotgun_r1
attributes.value: 6933743.0
attributes.tag: read_count_shotgun_rep200
attributes.value: 98328.0
attributes.tag: read_count_shotgun_woltka_uniq
attributes.value: 49209.0
attributes.tag: salinity_psu
attributes.value: 0.061
attributes.tag: sample name
attributes.value: qiita_sid_13114:13114.mayer.33.s003
attributes.tag: sample type
attributes.value: sediment
attributes.tag: sample_name_original
attributes.value: Mayer33.sediment.3
attributes.tag: sample_name_plus_plate
attributes.value: 2.Mayer33.sediment.3
attributes.tag: sampling method
attributes.value: bulk
attributes.tag: songbird_train_empo_3
attributes.value: Test
attributes.tag: study_sample_number
attributes.value: 3
attributes.tag: temperature_deg_c
attributes.value: 1.8