title: 13114.pinto.63.s007
organism: insect metagenome
description: Top section of symbiotic garden
attributes.tag: ENA first public
attributes.value: 2020-12-17
attributes.tag: ENA last update
attributes.value: 2020-12-15
attributes.tag: External Id
attributes.value: SAMEA7723463
attributes.tag: INSDC center alias
attributes.value: UCSDMI
attributes.tag: INSDC center name
attributes.value: University of California San Diego Microbiome Initiative
attributes.tag: INSDC first public
attributes.value: 2020-12-17T04:08:05Z
attributes.tag: INSDC last update
attributes.value: 2020-12-15T22:07:05Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13114:13114.pinto.63.s007
attributes.tag: alpha_shotgun_woltka_faithspd
attributes.value: 34.80722176648669
attributes.tag: alpha_shotgun_woltka_min3450_faithspd
attributes.value: 27.89504962
attributes.tag: alpha_shotgun_woltka_min3450_richness
attributes.value: 83.0
attributes.tag: alpha_shotgun_woltka_min3450_shannon
attributes.value: 3.358057741
attributes.tag: alpha_shotgun_woltka_rar3450_faithspd
attributes.value: 24.7240338
attributes.tag: alpha_shotgun_woltka_rar3450_richness
attributes.value: 65.0
attributes.tag: alpha_shotgun_woltka_rar3450_shannon
attributes.value: 3.347762803
attributes.tag: alpha_shotgun_woltka_richness
attributes.value: 103.0
attributes.tag: alpha_shotgun_woltka_shannon
attributes.value: 3.5350686505373727
attributes.tag: barcode_prefix
attributes.value: pinto.63.s007
attributes.tag: collection_timestamp
attributes.value: 5/26/16 0:00
attributes.tag: depth_sample
attributes.value: 0.3
attributes.tag: elevation
attributes.value: 29
attributes.tag: emp500_principal_investigator
attributes.value: Pinto
attributes.tag: emp500_study_id
attributes.value: 63
attributes.tag: emp500_title
attributes.value: Costa Rican leaf-cutter ant and bee material
attributes.tag: empo_0
attributes.value: EMP sample
attributes.tag: empo_1
attributes.value: Host-associated
attributes.tag: empo_2
attributes.value: Plant
attributes.tag: empo_3
attributes.value: Plant corpus
attributes.tag: env biome
attributes.value: tropical broadleaf forest biome
attributes.tag: env feature
attributes.value: insecta-associated habitat
attributes.tag: env package
attributes.value: host-associated
attributes.tag: env_material
attributes.value: organic material
attributes.tag: environmental_package
attributes.value: host-associated
attributes.tag: geo loc name
attributes.value: Costa Rica:Carara National Park
attributes.tag: host common name
attributes.value: zompopas
attributes.tag: host sex
attributes.value: female
attributes.tag: host subject id
attributes.value: gardentop.4
attributes.tag: host taxid
attributes.value: 520822
attributes.tag: host_substrate
attributes.value: leaf material
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: latitude
attributes.value: 9.77872
attributes.tag: lcms_batch
attributes.value: 4.00
attributes.tag: lcms_extraction_protocol
attributes.value: Bulk_201901_UCSD
attributes.tag: lcms_position
attributes.value: 4B9
attributes.tag: lcms_replicate
attributes.value: no
attributes.tag: lcms_sample_name_cmn
attributes.value: 4B9_3_40_pinto-63-s007-a03
attributes.tag: lcms_sample_name_fbmn
attributes.value: 4B9_3_40_pinto-63-s007-a03.mzML
attributes.tag: lcms_sample_type
attributes.value: Sample
attributes.tag: lcms_sample_type_sub
attributes.value: Bulk
attributes.tag: longitude
attributes.value: -84.60623
attributes.tag: original sample id
attributes.value: Pinto63.gardentop.4
attributes.tag: physical_specimen_location
attributes.value: UCSD Knight Lab Freezer I
attributes.tag: physical_specimen_remaining
attributes.value: TRUE
attributes.tag: project name
attributes.value: Pinto insects from Costa Rica: bees, leaf-cutter ants
attributes.tag: read_count_shotgun_r1
attributes.value: 14978642.0
attributes.tag: read_count_shotgun_rep200
attributes.value: 117181.0
attributes.tag: read_count_shotgun_woltka_uniq
attributes.value: 6880.0
attributes.tag: samp_store_temp
attributes.value: -80
attributes.tag: sample name
attributes.value: qiita_sid_13114:13114.pinto.63.s007
attributes.tag: sample type
attributes.value: fungus garden
attributes.tag: sample_name_original
attributes.value: Pinto63.gardentop.4
attributes.tag: sample_name_plus_plate
attributes.value: 6.Pinto63.gardentop.4
attributes.tag: sampling method
attributes.value: bulk
attributes.tag: songbird_train_empo_3
attributes.value: Train
attributes.tag: study_sample_number
attributes.value: 7
attributes.tag: tier
attributes.value: 2