title: 13114.song.75.s003
organism: gut metagenome
description: Florida manatee fecal sample
attributes.tag: ENA first public
attributes.value: 2020-12-17
attributes.tag: ENA last update
attributes.value: 2020-12-15
attributes.tag: External Id
attributes.value: SAMEA7723685
attributes.tag: INSDC center alias
attributes.value: UCSDMI
attributes.tag: INSDC center name
attributes.value: University of California San Diego Microbiome Initiative
attributes.tag: INSDC first public
attributes.value: 2020-12-17T04:08:04Z
attributes.tag: INSDC last update
attributes.value: 2020-12-15T23:55:54Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13114:13114.song.75.s003
attributes.tag: alpha_shotgun_woltka_faithspd
attributes.value: 175.57621067335822
attributes.tag: alpha_shotgun_woltka_min10k_faithspd
attributes.value: 175.3309915584232
attributes.tag: alpha_shotgun_woltka_min10k_richness
attributes.value: 1005.0
attributes.tag: alpha_shotgun_woltka_min10k_shannon
attributes.value: 5.132243265272788
attributes.tag: alpha_shotgun_woltka_min3450_faithspd
attributes.value: 78.64520006
attributes.tag: alpha_shotgun_woltka_min3450_richness
attributes.value: 407.0
attributes.tag: alpha_shotgun_woltka_min3450_shannon
attributes.value: 4.199056964
attributes.tag: alpha_shotgun_woltka_rar10k_faithspd
attributes.value: 62.428794209330356
attributes.tag: alpha_shotgun_woltka_rar10k_richness
attributes.value: 296.0
attributes.tag: alpha_shotgun_woltka_rar10k_shannon
attributes.value: 5.094050330983514
attributes.tag: alpha_shotgun_woltka_rar3450_faithspd
attributes.value: 29.35567884
attributes.tag: alpha_shotgun_woltka_rar3450_richness
attributes.value: 125.0
attributes.tag: alpha_shotgun_woltka_rar3450_shannon
attributes.value: 4.132582009
attributes.tag: alpha_shotgun_woltka_richness
attributes.value: 1008.0
attributes.tag: alpha_shotgun_woltka_shannon
attributes.value: 5.132403518405309
attributes.tag: barcode_prefix
attributes.value: song.75.s003
attributes.tag: collection_timestamp
attributes.value: 8/11/14 0:00
attributes.tag: elevation
attributes.value: 1.6
attributes.tag: emp500_principal_investigator
attributes.value: Song
attributes.tag: emp500_study_id
attributes.value: 75
attributes.tag: emp500_title
attributes.value: Captive aquatic mammal feces
attributes.tag: empo_0
attributes.value: EMP sample
attributes.tag: empo_1
attributes.value: Host-associated
attributes.tag: empo_2
attributes.value: Animal
attributes.tag: empo_3
attributes.value: Animal distal gut
attributes.tag: env biome
attributes.value: urban biome
attributes.tag: env feature
attributes.value: animal-associated habitat
attributes.tag: env package
attributes.value: host-associated
attributes.tag: env_material
attributes.value: feces
attributes.tag: environmental_package
attributes.value: host-associated
attributes.tag: gcms_analysis_batch
attributes.value: note applicable
attributes.tag: gcms_run_location
attributes.value: UCSD
attributes.tag: gcms_sample_name
attributes.value: EMP_Feces_song_75_s003_a03_M_254
attributes.tag: gcms_sequence
attributes.value: 254
attributes.tag: geo loc name
attributes.value: USA: State of Florida,South Florida Museum
attributes.tag: host body habitat
attributes.value: UBERON:feces
attributes.tag: host body product
attributes.value: UBERON:feces
attributes.tag: host body site
attributes.value: UBERON:feces
attributes.tag: host class
attributes.value: Mammalia
attributes.tag: host common name
attributes.value: Florida manatee
attributes.tag: host diet
attributes.value: herbivore
attributes.tag: host order
attributes.value: Sirenia
attributes.tag: host scientific name
attributes.value: Trichechus manatus latirostris
attributes.tag: host sex
attributes.value: male
attributes.tag: host subject id
attributes.value: SFM.ace
attributes.tag: host taxid
attributes.value: 127582
attributes.tag: host_family
attributes.value: Trichechidae
attributes.tag: host_flight
attributes.value: terrestrial, flightless
attributes.tag: host_phylum
attributes.value: Chordata
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: latitude
attributes.value: 27.5
attributes.tag: lcms_batch
attributes.value: 7.00
attributes.tag: lcms_extraction_protocol
attributes.value: Swabs_201901_UCSD
attributes.tag: lcms_position
attributes.value: 7F10
attributes.tag: lcms_replicate
attributes.value: no
attributes.tag: lcms_sample_name_cmn
attributes.value: 7F10_8_60_song-75-s003-a04
attributes.tag: lcms_sample_name_fbmn
attributes.value: 7F10_8_60_song-75-s003-a04.mzML
attributes.tag: lcms_sample_type
attributes.value: Sample
attributes.tag: lcms_sample_type_sub
attributes.value: Swabs
attributes.tag: longitude
attributes.value: -82.57
attributes.tag: original sample id
attributes.value: Song75.ace
attributes.tag: physical_specimen_location
attributes.value: UCSD Knight Lab Freezer I
attributes.tag: physical_specimen_remaining
attributes.value: TRUE
attributes.tag: project name
attributes.value: EMP500 Song Study 75
attributes.tag: read_count_shotgun_r1
attributes.value: 14285879.0
attributes.tag: read_count_shotgun_rep200
attributes.value: 11208052.0
attributes.tag: read_count_shotgun_woltka_uniq
attributes.value: 1553373.0
attributes.tag: samp_store_loc
attributes.value: CU Boulder
attributes.tag: samp_store_temp
attributes.value: -20C
attributes.tag: sample name
attributes.value: qiita_sid_13114:13114.song.75.s003
attributes.tag: sample type
attributes.value: stool
attributes.tag: sample_name_original
attributes.value: Song75.ace
attributes.tag: sample_name_plus_plate
attributes.value: 1.Song75.ace
attributes.tag: sampling method
attributes.value: bulk
attributes.tag: songbird_train_empo_3
attributes.value: Test
attributes.tag: study_sample_number
attributes.value: 3