title: 13114.palenik.42.s002
organism: marine metagenome
description: Offshore of Scripps pier, surface
attributes.tag: ENA first public
attributes.value: 2020-12-17
attributes.tag: ENA last update
attributes.value: 2020-12-15
attributes.tag: External Id
attributes.value: SAMEA7723671
attributes.tag: INSDC center alias
attributes.value: UCSDMI
attributes.tag: INSDC center name
attributes.value: University of California San Diego Microbiome Initiative
attributes.tag: INSDC first public
attributes.value: 2020-12-17T04:08:04Z
attributes.tag: INSDC last update
attributes.value: 2020-12-15T23:55:52Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13114:13114.palenik.42.s002
attributes.tag: alpha_shotgun_woltka_faithspd
attributes.value: 125.95017291814293
attributes.tag: alpha_shotgun_woltka_min10k_faithspd
attributes.value: 125.59456199988928
attributes.tag: alpha_shotgun_woltka_min10k_richness
attributes.value: 647.0
attributes.tag: alpha_shotgun_woltka_min10k_shannon
attributes.value: 4.068448961247543
attributes.tag: alpha_shotgun_woltka_min3450_faithspd
attributes.value: 67.11077296
attributes.tag: alpha_shotgun_woltka_min3450_richness
attributes.value: 272.0
attributes.tag: alpha_shotgun_woltka_min3450_shannon
attributes.value: 3.625782049
attributes.tag: alpha_shotgun_woltka_rar10k_faithspd
attributes.value: 31.934841066758967
attributes.tag: alpha_shotgun_woltka_rar10k_richness
attributes.value: 130.0
attributes.tag: alpha_shotgun_woltka_rar10k_shannon
attributes.value: 4.049935825297457
attributes.tag: alpha_shotgun_woltka_rar3450_faithspd
attributes.value: 13.7907845
attributes.tag: alpha_shotgun_woltka_rar3450_richness
attributes.value: 50.0
attributes.tag: alpha_shotgun_woltka_rar3450_shannon
attributes.value: 3.606636509
attributes.tag: alpha_shotgun_woltka_richness
attributes.value: 649.0
attributes.tag: alpha_shotgun_woltka_shannon
attributes.value: 4.068500142919562
attributes.tag: barcode_prefix
attributes.value: palenik.42.s002
attributes.tag: collection_timestamp
attributes.value: 2/29/16 0:00
attributes.tag: depth_sample
attributes.value: 0
attributes.tag: elevation
attributes.value: 0
attributes.tag: emp500_principal_investigator
attributes.value: Palenik
attributes.tag: emp500_study_id
attributes.value: 42
attributes.tag: emp500_title
attributes.value: San Diego seawater
attributes.tag: empo_0
attributes.value: EMP sample
attributes.tag: empo_1
attributes.value: Free-living
attributes.tag: empo_2
attributes.value: Saline
attributes.tag: empo_3
attributes.value: Water (saline)
attributes.tag: env biome
attributes.value: neritic epipelagic zone biome
attributes.tag: env feature
attributes.value: ocean
attributes.tag: env package
attributes.value: water
attributes.tag: env_material
attributes.value: sea water
attributes.tag: environmental_package
attributes.value: water
attributes.tag: geo loc name
attributes.value: North Pacific Ocean:North East Pacific Ocean coastal waters of California:Scripps Canyon
attributes.tag: host subject id
attributes.value: Palenik42.Seawater.2
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: latitude
attributes.value: 32.867225
attributes.tag: lcms_batch
attributes.value: 3.00
attributes.tag: lcms_extraction_protocol
attributes.value: Filter_201901_UCSD
attributes.tag: lcms_position
attributes.value: 3D2
attributes.tag: lcms_replicate
attributes.value: no
attributes.tag: lcms_sample_name_cmn
attributes.value: 3D2_6_32_palenik-42-s002-a02
attributes.tag: lcms_sample_name_fbmn
attributes.value: 3D2_6_32_palenik-42-s002-a02.mzML
attributes.tag: lcms_sample_type
attributes.value: Sample
attributes.tag: lcms_sample_type_sub
attributes.value: Filter
attributes.tag: longitude
attributes.value: -117.257596
attributes.tag: original sample id
attributes.value: Palenik42.Seawater.2
attributes.tag: oxygen_mg_per_l
attributes.value: not provided
attributes.tag: ph
attributes.value: not provided
attributes.tag: physical_specimen_location
attributes.value: UCSD Knight Lab Freezer I
attributes.tag: physical_specimen_remaining
attributes.value: FALSE
attributes.tag: project name
attributes.value: San Diego seawater
attributes.tag: read_count_shotgun_r1
attributes.value: 15578790.0
attributes.tag: read_count_shotgun_rep200
attributes.value: 151906.0
attributes.tag: read_count_shotgun_woltka_uniq
attributes.value: 972983.0
attributes.tag: salinity_psu
attributes.value: not provided
attributes.tag: sample name
attributes.value: qiita_sid_13114:13114.palenik.42.s002
attributes.tag: sample type
attributes.value: seawater
attributes.tag: sample_name_original
attributes.value: Palenik42.Seawater.2
attributes.tag: sample_name_plus_plate
attributes.value: 3.Palenik42.Seawater.2
attributes.tag: sampling method
attributes.value: filter
attributes.tag: songbird_train_empo_3
attributes.value: Train
attributes.tag: study_sample_number
attributes.value: 2
attributes.tag: tier
attributes.value: 1