title: 13114.mousseau.88.s061
organism: gut metagenome
description: Chernobyl vole feces mousseau.88.s061
attributes.tag: ENA first public
attributes.value: 2020-12-17
attributes.tag: ENA last update
attributes.value: 2020-12-15
attributes.tag: External Id
attributes.value: SAMEA7723648
attributes.tag: INSDC center alias
attributes.value: UCSDMI
attributes.tag: INSDC center name
attributes.value: University of California San Diego Microbiome Initiative
attributes.tag: INSDC first public
attributes.value: 2020-12-17T04:08:04Z
attributes.tag: INSDC last update
attributes.value: 2020-12-15T23:55:50Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13114:13114.mousseau.88.s061
attributes.tag: alpha_shotgun_woltka_faithspd
attributes.value: 64.69741339592588
attributes.tag: alpha_shotgun_woltka_min3450_faithspd
attributes.value: 53.50633088
attributes.tag: alpha_shotgun_woltka_min3450_richness
attributes.value: 236.0
attributes.tag: alpha_shotgun_woltka_min3450_shannon
attributes.value: 5.27943705
attributes.tag: alpha_shotgun_woltka_rar3450_faithspd
attributes.value: 47.67045001
attributes.tag: alpha_shotgun_woltka_rar3450_richness
attributes.value: 205.0
attributes.tag: alpha_shotgun_woltka_rar3450_shannon
attributes.value: 5.252138527
attributes.tag: alpha_shotgun_woltka_richness
attributes.value: 283.0
attributes.tag: alpha_shotgun_woltka_shannon
attributes.value: 5.432950580590373
attributes.tag: barcode_prefix
attributes.value: mousseau.88.s061
attributes.tag: collection_timestamp
attributes.value: 7/1/16 12:07
attributes.tag: elevation
attributes.value: 113.1
attributes.tag: emp500_principal_investigator
attributes.value: Mousseau
attributes.tag: emp500_study_id
attributes.value: 88
attributes.tag: emp500_title
attributes.value: Chernobyl vole feces
attributes.tag: empo_0
attributes.value: EMP sample
attributes.tag: empo_1
attributes.value: Host-associated
attributes.tag: empo_2
attributes.value: Animal
attributes.tag: empo_3
attributes.value: Animal distal gut
attributes.tag: env biome
attributes.value: temperate mixed forest biome
attributes.tag: env feature
attributes.value: host-associated habitat
attributes.tag: env package
attributes.value: host-associated
attributes.tag: env_material
attributes.value: feces
attributes.tag: environmental_package
attributes.value: host-associated
attributes.tag: experiment_code
attributes.value: Ch 2016
attributes.tag: experimental_factor
attributes.value: radiation level
attributes.tag: geo loc name
attributes.value: Ukraine:City of Chernobyl
attributes.tag: host body habitat
attributes.value: UBERON:feces
attributes.tag: host body product
attributes.value: UBERON:feces
attributes.tag: host body site
attributes.value: UBERON:feces
attributes.tag: host class
attributes.value: Mammalia
attributes.tag: host common name
attributes.value: bank vole
attributes.tag: host diet
attributes.value: herbivore/insectivore
attributes.tag: host length mm
attributes.value: 94.37
attributes.tag: host order
attributes.value: Rodentia
attributes.tag: host scientific name
attributes.value: Myodes glareolus
attributes.tag: host sex
attributes.value: female
attributes.tag: host state
attributes.value: ad
attributes.tag: host subject id
attributes.value: 436
attributes.tag: host taxid
attributes.value: 447135
attributes.tag: host tot mass g
attributes.value: 20.22
attributes.tag: host treatment
attributes.value: clean
attributes.tag: host_family
attributes.value: Cricetidae
attributes.tag: host_flight
attributes.value: terrestrial, flightless
attributes.tag: host_head_width_mm
attributes.value: 12.56
attributes.tag: host_phylum
attributes.value: Chordata
attributes.tag: host_rad_gammaspec_raw_cps
attributes.value: 11.2
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: latitude
attributes.value: 51.157146
attributes.tag: lcms_batch
attributes.value: 6.00
attributes.tag: lcms_extraction_protocol
attributes.value: Bulk_201901_UCSD
attributes.tag: lcms_position
attributes.value: 6A3
attributes.tag: lcms_replicate
attributes.value: no
attributes.tag: lcms_sample_name_cmn
attributes.value: 6A3_4_70_mousseau-88-s061-a02
attributes.tag: lcms_sample_name_fbmn
attributes.value: 6A3_4_70_mousseau-88-s061-a02.mzML
attributes.tag: lcms_sample_type
attributes.value: Sample
attributes.tag: lcms_sample_type_sub
attributes.value: Bulk
attributes.tag: loc_rad_geiger_gamma_usv_per_h
attributes.value: 0.184
attributes.tag: location
attributes.value: 19
attributes.tag: location code
attributes.value: RT
attributes.tag: longitude
attributes.value: 29.985035
attributes.tag: original sample id
attributes.value: Mousseau88.FIN.436
attributes.tag: physical_specimen_location
attributes.value: UCSD Knight Lab Freezer I and University of Oulu, Finland
attributes.tag: physical_specimen_remaining
attributes.value: TRUE
attributes.tag: project name
attributes.value: Chernobyl Microbiome project_LA
attributes.tag: read_count_shotgun_r1
attributes.value: 1457698.0
attributes.tag: read_count_shotgun_rep200
attributes.value: 13092.0
attributes.tag: read_count_shotgun_woltka_uniq
attributes.value: 8131.0
attributes.tag: sample name
attributes.value: qiita_sid_13114:13114.mousseau.88.s061
attributes.tag: sample type
attributes.value: stool
attributes.tag: sample_mass_grams
attributes.value: 0.2
attributes.tag: sample_name_original
attributes.value: Mousseau88.FIN.436
attributes.tag: sample_name_plus_plate
attributes.value: 7.Mousseau88.FIN.436
attributes.tag: sampling method
attributes.value: bulk
attributes.tag: songbird_train_empo_3
attributes.value: Train
attributes.tag: store_cond
attributes.value: 90 days -80C
attributes.tag: study_sample_number
attributes.value: 61
attributes.tag: tier
attributes.value: 3
attributes.tag: trap
attributes.value: 1