title: 13114.zaneveld.9.s001
organism: coral metagenome
description: Coral Tissue from Pocillopora damicornis sampled from site Bills Bay,Ningaloo,Australia as sample E7.10.Poc.dami.1.20150621.T of the Global Coral Microbiome Project.
attributes.tag: ENA first public
attributes.value: 2020-12-17
attributes.tag: ENA last update
attributes.value: 2020-12-15
attributes.tag: External Id
attributes.value: SAMEA7723742
attributes.tag: INSDC center alias
attributes.value: UCSDMI
attributes.tag: INSDC center name
attributes.value: University of California San Diego Microbiome Initiative
attributes.tag: INSDC first public
attributes.value: 2020-12-17T04:08:05Z
attributes.tag: INSDC last update
attributes.value: 2020-12-15T23:55:59Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13114:13114.zaneveld.9.s001
attributes.tag: alpha_shotgun_woltka_faithspd
attributes.value: 36.82177986793045
attributes.tag: alpha_shotgun_woltka_richness
attributes.value: 105.0
attributes.tag: alpha_shotgun_woltka_shannon
attributes.value: 4.269736014375581
attributes.tag: barcode_prefix
attributes.value: zaneveld.9.s001
attributes.tag: binary_algal_contact
attributes.value: n
attributes.tag: binary_cca_contact
attributes.value: n
attributes.tag: binary_disease
attributes.value: n
attributes.tag: binary_macroalgal_contact
attributes.value: n
attributes.tag: binary_tissue_loss
attributes.value: n
attributes.tag: binary_turf_contact
attributes.value: n
attributes.tag: biological_sample_notes
attributes.value: WA_226
attributes.tag: cca_contact_percent
attributes.value: 0
attributes.tag: cca_overgrown
attributes.value: n
attributes.tag: collection id
attributes.value: Bills Bay_20150621
attributes.tag: collection_timestamp
attributes.value: 6/21/15 9:10
attributes.tag: colony_height_m
attributes.value: 17
attributes.tag: colony_name
attributes.value: E7.10.Poc.dami.1.20150621
attributes.tag: colony_width1
attributes.value: 13
attributes.tag: colony_width2
attributes.value: 14
attributes.tag: compartment_replicates
attributes.value: 1
attributes.tag: coral_color
attributes.value: C2
attributes.tag: cyanobacteria_contact
attributes.value: n
attributes.tag: cyanobacteria_overgrown
attributes.value: n
attributes.tag: cyanobacteria_percent
attributes.value: 0
attributes.tag: daily_replicate
attributes.value: 1
attributes.tag: depth_method
attributes.value: measured
attributes.tag: depth_sample
attributes.value: 2.8
attributes.tag: disease_percent
attributes.value: 0
attributes.tag: dna_extracted
attributes.value: n
attributes.tag: dominant_cover_2m
attributes.value: live coral
attributes.tag: elevation
attributes.value: 0
attributes.tag: emp500_principal_investigator
attributes.value: Zaneveld
attributes.tag: emp500_study_id
attributes.value: 9
attributes.tag: emp500_title
attributes.value: Scleractinian corals
attributes.tag: empo_0
attributes.value: EMP sample
attributes.tag: empo_1
attributes.value: Host-associated
attributes.tag: empo_2
attributes.value: Animal
attributes.tag: empo_3
attributes.value: Animal secretion
attributes.tag: env biome
attributes.value: marine reef biome
attributes.tag: env feature
attributes.value: coral reef
attributes.tag: env package
attributes.value: host-associated
attributes.tag: env_material
attributes.value: organic material
attributes.tag: environmental_package
attributes.value: host-associated
attributes.tag: expedition_number
attributes.value: E7
attributes.tag: experimental_factor
attributes.value: not provided
attributes.tag: field_host_clade_sensu_fukami
attributes.value: X
attributes.tag: field_host_clade_sensu_fukami_numeric
attributes.value: 10
attributes.tag: field_host_genus_id
attributes.value: Pocillopora
attributes.tag: field_host_name
attributes.value: Pocillopora damicornis
attributes.tag: field_host_species_id
attributes.value: damicornis
attributes.tag: gcms_analysis_batch
attributes.value: note applicable
attributes.tag: gcms_run_location
attributes.value: UCSD
attributes.tag: gcms_sample_name
attributes.value: EMP_Feces_zaneveld_9_s001_a03_M_009
attributes.tag: gcms_sequence
attributes.value: 009
attributes.tag: geo loc name
attributes.value: Australia
attributes.tag: host body habitat
attributes.value: UBERON:multicellular organism
attributes.tag: host body product
attributes.value: UBERON:multicellular organism
attributes.tag: host body site
attributes.value: UBERON:multicellular organism
attributes.tag: host subject id
attributes.value: E7.10.Poc.dami.1.20150621.T
attributes.tag: host taxid
attributes.value: 46731
attributes.tag: host_common_name_provided
attributes.value: stony corals
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: latitude
attributes.value: -23.140369
attributes.tag: lcms_batch
attributes.value: 4.00
attributes.tag: lcms_extraction_protocol
attributes.value: Bulk_201901_UCSD
attributes.tag: lcms_position
attributes.value: 4H11
attributes.tag: lcms_replicate
attributes.value: no
attributes.tag: lcms_sample_name_cmn
attributes.value: 4H11_7_47_zaneveld-9-s001-a04
attributes.tag: lcms_sample_name_fbmn
attributes.value: 4H11_7_47_zaneveld-9-s001-a04.mzML
attributes.tag: lcms_sample_type
attributes.value: Sample
attributes.tag: lcms_sample_type_sub
attributes.value: Bulk
attributes.tag: local_colony_name
attributes.value: E7.Poc.dami.1
attributes.tag: local_sample_id
attributes.value: WA_226_T
attributes.tag: longitude
attributes.value: 113.769166
attributes.tag: n_algal_contacts
attributes.value: 0
attributes.tag: n_macroalgal_contacts
attributes.value: 0
attributes.tag: original sample id
attributes.value: Zaneveld9.01.E7.10.Poc.dami.1.20150621.T
attributes.tag: outgroup
attributes.value: n
attributes.tag: parrotfish_bites
attributes.value: n
attributes.tag: physical samp avail now
attributes.value: y
attributes.tag: physical_specimen_location
attributes.value: UCSD Knight Lab Freezer I and Medina Lab, Penn State
attributes.tag: physical_specimen_remaining
attributes.value: TRUE
attributes.tag: project name
attributes.value: Co-evolution of scleractinian corals and their microbial symbionts
attributes.tag: read_count_shotgun_r1
attributes.value: 13822439.0
attributes.tag: read_count_shotgun_rep200
attributes.value: 24874.0
attributes.tag: read_count_shotgun_woltka_uniq
attributes.value: 1576.0
attributes.tag: reef_name
attributes.value: Bills Bay
attributes.tag: reef_type
attributes.value: Fringing Reef
attributes.tag: sample name
attributes.value: qiita_sid_13114:13114.zaneveld.9.s001
attributes.tag: sample type
attributes.value: coral tissue
attributes.tag: sample_name_original
attributes.value: Zaneveld9.01.E7.10.Poc.dami.1.20150621.T
attributes.tag: sample_name_plus_plate
attributes.value: 1.Zaneveld9.01.E7.10.Poc.dami.1.20150621.T
attributes.tag: sampling method
attributes.value: fractionated
attributes.tag: sampling_expedition
attributes.value: E7_Ningaloo_2015
attributes.tag: seagrass_contact
attributes.value: n
attributes.tag: sediment_contact
attributes.value: n
attributes.tag: site name
attributes.value: Ningaloo
attributes.tag: songbird_train_empo_3
attributes.value: Train
attributes.tag: study_sample_number
attributes.value: 1
attributes.tag: substrate
attributes.value: dead_coral
attributes.tag: taxonomy_string
attributes.value: Cnidaria_Anthozoa_Scleractinia
attributes.tag: taxonomy_string_with_clade
attributes.value: Cnidaria_Anthozoa_Scleractinia_X
attributes.tag: temperature_deg_c
attributes.value: 25
attributes.tag: tier
attributes.value: 1
attributes.tag: tissue compartment
attributes.value: T
attributes.tag: tissue_loss_percent
attributes.value: 0
attributes.tag: turf_contact_percent
attributes.value: 0
attributes.tag: turf_overgrown
attributes.value: n
attributes.tag: visibility
attributes.value: 8
attributes.tag: visibility_method
attributes.value: Diver Estimate