title: 13114.mayer.34.s006
organism: freshwater sediment metagenome
description: sediment sample A3
attributes.tag: ENA first public
attributes.value: 2020-12-17
attributes.tag: ENA last update
attributes.value: 2020-12-15
attributes.tag: External Id
attributes.value: SAMEA7723442
attributes.tag: INSDC center alias
attributes.value: UCSDMI
attributes.tag: INSDC center name
attributes.value: University of California San Diego Microbiome Initiative
attributes.tag: INSDC first public
attributes.value: 2020-12-17T04:08:05Z
attributes.tag: INSDC last update
attributes.value: 2020-12-15T22:07:03Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13114:13114.mayer.34.s006
attributes.tag: alpha_shotgun_woltka_faithspd
attributes.value: 228.32493652259632
attributes.tag: alpha_shotgun_woltka_min10k_faithspd
attributes.value: 226.1965087796159
attributes.tag: alpha_shotgun_woltka_min10k_richness
attributes.value: 1299.0
attributes.tag: alpha_shotgun_woltka_min10k_shannon
attributes.value: 7.31320754084429
attributes.tag: alpha_shotgun_woltka_min3450_faithspd
attributes.value: 127.19315559999998
attributes.tag: alpha_shotgun_woltka_min3450_richness
attributes.value: 790.0
attributes.tag: alpha_shotgun_woltka_min3450_shannon
attributes.value: 6.916794257
attributes.tag: alpha_shotgun_woltka_rar10k_faithspd
attributes.value: 168.98201437420153
attributes.tag: alpha_shotgun_woltka_rar10k_richness
attributes.value: 893.0
attributes.tag: alpha_shotgun_woltka_rar10k_shannon
attributes.value: 7.258691570523237
attributes.tag: alpha_shotgun_woltka_rar3450_faithspd
attributes.value: 79.77133213
attributes.tag: alpha_shotgun_woltka_rar3450_richness
attributes.value: 436.0
attributes.tag: alpha_shotgun_woltka_rar3450_shannon
attributes.value: 6.766422911
attributes.tag: alpha_shotgun_woltka_richness
attributes.value: 1303.0
attributes.tag: alpha_shotgun_woltka_shannon
attributes.value: 7.3151824081968835
attributes.tag: barcode_prefix
attributes.value: mayer.34.s006
attributes.tag: collection_timestamp
attributes.value: 1/21/16 0:00
attributes.tag: depth_sample
attributes.value: 0.1
attributes.tag: elevation
attributes.value: 1706
attributes.tag: emp500_principal_investigator
attributes.value: Mayer
attributes.tag: emp500_study_id
attributes.value: 34
attributes.tag: emp500_title
attributes.value: Animas watershed
attributes.tag: empo_0
attributes.value: EMP sample
attributes.tag: empo_1
attributes.value: Free-living
attributes.tag: empo_2
attributes.value: Non-saline
attributes.tag: empo_3
attributes.value: Sediment (non-saline)
attributes.tag: env biome
attributes.value: Small river biome
attributes.tag: env feature
attributes.value: tributary
attributes.tag: env package
attributes.value: sediment
attributes.tag: env_material
attributes.value: stream sediment
attributes.tag: environmental_package
attributes.value: sediment
attributes.tag: gcms_analysis_batch
attributes.value: note applicable
attributes.tag: gcms_run_location
attributes.value: UCSD
attributes.tag: gcms_sample_name
attributes.value: EMP_Feces_mayer_34_s006_a03_M_085
attributes.tag: gcms_sequence
attributes.value: 085
attributes.tag: geo loc name
attributes.value: USA: State of Colorado,San Juan County,Animas River
attributes.tag: host subject id
attributes.value: A3
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: latitude
attributes.value: 36.82908
attributes.tag: lcms_batch
attributes.value: 1.00
attributes.tag: lcms_extraction_protocol
attributes.value: Bulk_201901_UCSD
attributes.tag: lcms_position
attributes.value: 1A3
attributes.tag: lcms_replicate
attributes.value: no
attributes.tag: lcms_sample_name_cmn
attributes.value: 1A3_1_4_mayer-34-s006-a04
attributes.tag: lcms_sample_name_fbmn
attributes.value: 1A3_1_4_mayer-34-s006-a04.mzML
attributes.tag: lcms_sample_type
attributes.value: Sample
attributes.tag: lcms_sample_type_sub
attributes.value: Bulk
attributes.tag: longitude
attributes.value: -107.99786
attributes.tag: original sample id
attributes.value: Mayer34.sediment.6
attributes.tag: oxygen_mg_per_l
attributes.value: 9.14
attributes.tag: ph
attributes.value: 8.26
attributes.tag: physical_specimen_location
attributes.value: UCSD Knight Lab Freezer I and MayerLab -80 Room 212
attributes.tag: physical_specimen_remaining
attributes.value: TRUE
attributes.tag: project name
attributes.value: Animas Watershed
attributes.tag: read_count_shotgun_r1
attributes.value: 9190552.0
attributes.tag: read_count_shotgun_rep200
attributes.value: 155666.0
attributes.tag: read_count_shotgun_woltka_uniq
attributes.value: 32501.0
attributes.tag: redox_potential_millivolts
attributes.value: 177.3
attributes.tag: salinity_psu
attributes.value: 0.31
attributes.tag: sample name
attributes.value: qiita_sid_13114:13114.mayer.34.s006
attributes.tag: sample type
attributes.value: sediment
attributes.tag: sample_name_original
attributes.value: Mayer34.sediment.6
attributes.tag: sample_name_plus_plate
attributes.value: 2.Mayer34.sediment.6
attributes.tag: sampling method
attributes.value: bulk
attributes.tag: songbird_train_empo_3
attributes.value: Train
attributes.tag: study_sample_number
attributes.value: 6
attributes.tag: temperature_deg_c
attributes.value: 0