title: 13114.thomas.18.s038
organism: sponge metagenome
description: C.orientalis: 1tube of bacterial pellet called CLI1bac and 10 tubes of tissue called CLI1.1 to CLI1.10
attributes.tag: ENA first public
attributes.value: 2020-12-17
attributes.tag: ENA last update
attributes.value: 2020-12-15
attributes.tag: External Id
attributes.value: SAMEA7723716
attributes.tag: INSDC center alias
attributes.value: UCSDMI
attributes.tag: INSDC center name
attributes.value: University of California San Diego Microbiome Initiative
attributes.tag: INSDC first public
attributes.value: 2020-12-17T04:08:04Z
attributes.tag: INSDC last update
attributes.value: 2020-12-15T23:55:57Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13114:13114.thomas.18.s038
attributes.tag: alpha_shotgun_woltka_faithspd
attributes.value: 27.891453419959817
attributes.tag: alpha_shotgun_woltka_richness
attributes.value: 73.0
attributes.tag: alpha_shotgun_woltka_shannon
attributes.value: 3.3831626477794763
attributes.tag: barcode_prefix
attributes.value: thomas.18.s038
attributes.tag: collection_timestamp
attributes.value: 12/23/15 0:00
attributes.tag: depth_sample
attributes.value: 5
attributes.tag: elevation
attributes.value: 0
attributes.tag: emp500_principal_investigator
attributes.value: Thomas
attributes.tag: emp500_study_id
attributes.value: 18
attributes.tag: emp500_title
attributes.value: Ocean sponges
attributes.tag: empo_0
attributes.value: EMP sample
attributes.tag: empo_1
attributes.value: Host-associated
attributes.tag: empo_2
attributes.value: Animal
attributes.tag: empo_3
attributes.value: Animal corpus
attributes.tag: env biome
attributes.value: marine coral reef biome
attributes.tag: env feature
attributes.value: marine benthic feature
attributes.tag: env package
attributes.value: host-associated
attributes.tag: env_material
attributes.value: organic material
attributes.tag: environmental_package
attributes.value: host-associated
attributes.tag: experimental_factor
attributes.value: none, natural samples
attributes.tag: gcms_analysis_batch
attributes.value: note applicable
attributes.tag: gcms_run_location
attributes.value: UCSD
attributes.tag: gcms_sample_name
attributes.value: EMP_Feces_thomas_18_s038_a03_M_034
attributes.tag: gcms_sequence
attributes.value: 034
attributes.tag: geo loc name
attributes.value: Australia:Queensland,Great Barrier Reef,Davies Reef
attributes.tag: host body habitat
attributes.value: UBERON:multicellular organism
attributes.tag: host body product
attributes.value: UBERON:multicellular organism
attributes.tag: host body site
attributes.value: UBERON:multicellular organism
attributes.tag: host life stage
attributes.value: adult
attributes.tag: host scientific name
attributes.value: Cliona orientalis
attributes.tag: host subject id
attributes.value: C.orientalis_rep1
attributes.tag: host taxid
attributes.value: 281731
attributes.tag: host_disease_stat
attributes.value: healthy
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: latitude
attributes.value: -18.822567
attributes.tag: lcms_batch
attributes.value: 4.00
attributes.tag: lcms_extraction_protocol
attributes.value: Bulk_201901_UCSD
attributes.tag: lcms_position
attributes.value: 4C10
attributes.tag: lcms_replicate
attributes.value: no
attributes.tag: lcms_sample_name_cmn
attributes.value: 4C10_1_7_thomas-18-s038-a04
attributes.tag: lcms_sample_name_fbmn
attributes.value: 4C10_1_7_thomas-18-s038-a04.mzML
attributes.tag: lcms_sample_type
attributes.value: Sample
attributes.tag: lcms_sample_type_sub
attributes.value: Bulk
attributes.tag: longitude
attributes.value: 147.63755
attributes.tag: original sample id
attributes.value: Thomas18.CLI1tis
attributes.tag: physical_specimen_location
attributes.value: UCSD Knight Lab Freezer I
attributes.tag: physical_specimen_remaining
attributes.value: TRUE
attributes.tag: project name
attributes.value: EMP sponge microbiome deep sequencing
attributes.tag: read_count_shotgun_r1
attributes.value: 2884821.0
attributes.tag: read_count_shotgun_rep200
attributes.value: 6791.0
attributes.tag: read_count_shotgun_woltka_uniq
attributes.value: 1204.0
attributes.tag: sample name
attributes.value: qiita_sid_13114:13114.thomas.18.s038
attributes.tag: sample type
attributes.value: sponge tissue
attributes.tag: sample_name_original
attributes.value: Thomas18.CLI1tis
attributes.tag: sample_name_plus_plate
attributes.value: X.Thomas18.CLI1tis
attributes.tag: sampling method
attributes.value: bulk
attributes.tag: songbird_train_empo_3
attributes.value: Test
attributes.tag: study_sample_number
attributes.value: 38
attributes.tag: temperature_deg_c
attributes.value: 29
attributes.tag: tier
attributes.value: 1