title: 13114.smith.39.s007
organism: algae metagenome
description: Algae swab from Palmyra
attributes.tag: ENA first public
attributes.value: 2020-12-17
attributes.tag: ENA last update
attributes.value: 2020-12-15
attributes.tag: External Id
attributes.value: SAMEA7723511
attributes.tag: INSDC center alias
attributes.value: UCSDMI
attributes.tag: INSDC center name
attributes.value: University of California San Diego Microbiome Initiative
attributes.tag: INSDC first public
attributes.value: 2020-12-17T04:08:05Z
attributes.tag: INSDC last update
attributes.value: 2020-12-15T22:07:09Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13114:13114.smith.39.s007
attributes.tag: alpha_shotgun_woltka_faithspd
attributes.value: 130.14228260699542
attributes.tag: alpha_shotgun_woltka_min10k_faithspd
attributes.value: 130.14228260699542
attributes.tag: alpha_shotgun_woltka_min10k_richness
attributes.value: 615.0
attributes.tag: alpha_shotgun_woltka_min10k_shannon
attributes.value: 7.236189634051362
attributes.tag: alpha_shotgun_woltka_min3450_faithspd
attributes.value: 80.40947289
attributes.tag: alpha_shotgun_woltka_min3450_richness
attributes.value: 336.0
attributes.tag: alpha_shotgun_woltka_min3450_shannon
attributes.value: 6.2948275360000014
attributes.tag: alpha_shotgun_woltka_rar10k_faithspd
attributes.value: 124.49637979442969
attributes.tag: alpha_shotgun_woltka_rar10k_richness
attributes.value: 580.0
attributes.tag: alpha_shotgun_woltka_rar10k_shannon
attributes.value: 7.2299685840376915
attributes.tag: alpha_shotgun_woltka_rar3450_faithspd
attributes.value: 73.04999699
attributes.tag: alpha_shotgun_woltka_rar3450_richness
attributes.value: 301.0
attributes.tag: alpha_shotgun_woltka_rar3450_shannon
attributes.value: 6.253987535
attributes.tag: alpha_shotgun_woltka_richness
attributes.value: 615.0
attributes.tag: alpha_shotgun_woltka_shannon
attributes.value: 7.236189634051362
attributes.tag: barcode_prefix
attributes.value: smith.39.s007
attributes.tag: collection_timestamp
attributes.value: 10/4/15 0:00
attributes.tag: depth_sample
attributes.value: 5
attributes.tag: elevation
attributes.value: 0
attributes.tag: emp500_principal_investigator
attributes.value: Smith
attributes.tag: emp500_study_id
attributes.value: 39
attributes.tag: emp500_title
attributes.value: Palmyra algae
attributes.tag: empo_0
attributes.value: EMP sample
attributes.tag: empo_1
attributes.value: Host-associated
attributes.tag: empo_2
attributes.value: Plant
attributes.tag: empo_3
attributes.value: Plant surface
attributes.tag: env biome
attributes.value: marine reef biome
attributes.tag: env feature
attributes.value: marine benthic feature
attributes.tag: env package
attributes.value: host-associated
attributes.tag: env_material
attributes.value: organic material
attributes.tag: environmental_package
attributes.value: host-associated
attributes.tag: gcms_analysis_batch
attributes.value: note applicable
attributes.tag: gcms_run_location
attributes.value: UCSD
attributes.tag: gcms_sample_name
attributes.value: EMP_Feces_smith_39_s007_a03_M_067
attributes.tag: gcms_sequence
attributes.value: 067
attributes.tag: geo loc name
attributes.value: Oceania:Kiribati:Northern Line Islands:Palmyra Atoll
attributes.tag: host body habitat
attributes.value: UBERON:multicellular organism
attributes.tag: host body product
attributes.value: UBERON:multicellular organism
attributes.tag: host body site
attributes.value: UBERON:multicellular organism
attributes.tag: host scientific name
attributes.value: Peyssonnelia
attributes.tag: host subject id
attributes.value: PEYS
attributes.tag: host taxid
attributes.value: 173456
attributes.tag: host_common_name_provided
attributes.value: Peyssonnelia sp.
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: latitude
attributes.value: 5.8693
attributes.tag: lcms_replicate
attributes.value: no
attributes.tag: longitude
attributes.value: -162.11089
attributes.tag: original sample id
attributes.value: Smith39.PEYS
attributes.tag: physical_specimen_location
attributes.value: UCSD Knight Lab Freezer I
attributes.tag: physical_specimen_remaining
attributes.value: TRUE
attributes.tag: project name
attributes.value: Algae from Palmyra Atoll
attributes.tag: read_count_shotgun_r1
attributes.value: 8007683.0
attributes.tag: read_count_shotgun_rep200
attributes.value: 25312.0
attributes.tag: read_count_shotgun_woltka_uniq
attributes.value: 13497.0
attributes.tag: sample name
attributes.value: qiita_sid_13114:13114.smith.39.s007
attributes.tag: sample type
attributes.value: algae
attributes.tag: sample_name_original
attributes.value: Smith39.PEYS
attributes.tag: sample_name_plus_plate
attributes.value: 2.Smith39.PEYS
attributes.tag: sampling method
attributes.value: bulk or swab
attributes.tag: site name
attributes.value: Penguin Spit Middle
attributes.tag: songbird_train_empo_3
attributes.value: Test
attributes.tag: study_sample_number
attributes.value: 7