title: UNC_FaireSeq_Gliobla
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Gliobla
attributes.tag: biomaterial_provider
attributes.value: Dr. Darrell Bigner at Duke University Medical Center
attributes.tag: datatype
attributes.value: FaireSeq
attributes.tag: datatype description
attributes.value: FAIRE-seq Open Chromatin
attributes.tag: controlid
attributes.value: Gliobla/Input
attributes.tag: labversion
attributes.value: baseAlignCounts.pl v 1,fseq v 1.84, iff_H54,p-value cutoff: 0.1
attributes.tag: replicate
attributes.value: 1,3,2
attributes.tag: cell organism
attributes.value: human
attributes.tag: cell description
attributes.value: glioblastoma, these cells (aka H54 and D54) come from a surgical resection from a patient with glioblastoma multiforme (WHO Grade IV). D54 is a commonly studied glioblastoma cell line (Bao et al., 2006) that has been thoroughly described by S Bigner (1981). (PMID: 7252524)
attributes.tag: cell karyotype
attributes.value: cancer
attributes.tag: cell lineage
attributes.value: ectoderm
attributes.tag: cell sex
attributes.value: U
attributes.tag: controlid
attributes.value: Gliobla/Input
attributes.tag: labversion
attributes.value: align_on_cluster_bwa.pl v 1
attributes.tag: replicate
attributes.value: 1
attributes.tag: replicate description
attributes.value: tier 1