title: MIMS Environmental/Metagenome sample from alkaline flooded soil
organism: soil metagenome
description: Saline alkaline soil was regularly flooded to decrease salinity, the bacterial community structure was monitored.
attributes.tag: collection_date
attributes.value: 2013-05-15
attributes.tag: depth
attributes.value: 0-15 cm
attributes.tag: elev
attributes.value: 2240 masl
attributes.tag: env_biome
attributes.value: soil from a former lake bed in the central highland of Mexico
attributes.tag: env_feature
attributes.value: soil from a former lake bed
attributes.tag: env_material
attributes.value: Soil
attributes.tag: geo_loc_name
attributes.value: Mexico: central highland
attributes.tag: lat_lon
attributes.value: 19.3 N 98.6 W
attributes.tag: rel_to_oxygen
attributes.value: aerobe
attributes.tag: samp_collect_device
attributes.value: augering
attributes.tag: samp_mat_process
attributes.value: removal of organic material and humic acids and DNA extraction by three different methods, and pyrosequencing
attributes.tag: samp_size
attributes.value: triplicates of 0.5 g
attributes.tag: samp_vol_we_dna_ext
attributes.value: 1 g four times per sample per method
attributes.tag: source_material_id
attributes.value: 16S rRNA V1-V3 region
attributes.tag: BioSampleModel
attributes.value: MIMS.me
attributes.tag: BioSampleModel
attributes.value: MIGS/MIMS/MIMARKS.soil