title: TEDDY OU Gut MAG
organism: uncultured Clostridium sp.
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1444342618: SRR7558013,SRR7557901,SRR7560633,SRR7562323,SRR7557708,SRR7557071,SRR7568184,SRR7561940,SRR7558767,SRR7565111,SRR7561744,SRR7558617,SRR7568797,SRR7561083,SRR7564221,SRR7564220,SRR7565822,SRR7558466,SRR7560628,SRR7560843,SRR7562905,SRR7566801,SRR7563182,SRR7560477,SRR7562059,SRR7558554,SRR7561668
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:10:05Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T07:34:40Z
attributes.tag: External Id
attributes.value: SAMEA7435747
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:10:05Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T07:34:40Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1444342618_MAG150
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 94.94
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 1.00
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: female
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09410284,SAMN09411236,SAMN09411342,SAMN09411741,SAMN09412946,SAMN09413339,SAMN09413878,SAMN09414111,SAMN09414335,SAMN09414881,SAMN09414919,SAMN09414982,SAMN09415063,SAMN09415281,SAMN09416206,SAMN09416206,SAMN09417099,SAMN09417410,SAMN09417625,SAMN09417852,SAMN09417859,SAMN09418380,SAMN09418468,SAMN09419000,SAMN09419360,SAMN09419407,SAMN09419862
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1444342618_MAG150
attributes.tag: scientific_name
attributes.value: uncultured Clostridium sp.
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach