organism: freshwater metagenome
description: Lake Granotes
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2014-11-26T03:01:06Z
attributes.tag: ENA-KEYWORDS
attributes.value: GSC, MIMARKS, MIxS
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2018-03-09T10:12:57Z
attributes.tag: External Id
attributes.value: SAMEA2065205
attributes.tag: INSDC center name
attributes.value: CEAB-CSIC
attributes.tag: INSDC first public
attributes.value: 2014-11-26T03:01:06Z
attributes.tag: INSDC last update
attributes.value: 2018-03-09T10:12:57Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: Granotes 1 m
attributes.tag: alkalinity
attributes.value: 20
attributes.tag: ammonium
attributes.value: 1
attributes.tag: amount or size of sample collected
attributes.value: 2000 mL
attributes.tag: broker name
attributes.value: ENA
attributes.tag: chlorophyll
attributes.value: 4.57
attributes.tag: collection date
attributes.value: 2007-07-15
attributes.tag: dissolved organic carbon
attributes.value: 2.2
attributes.tag: environment
attributes.value: Lake Granotes
attributes.tag: environment (biome)
attributes.value: Montane Freshwater
attributes.tag: environment (feature)
attributes.value: Lake
attributes.tag: environment (material)
attributes.value: Water
attributes.tag: geographic location (altitude/elevation)
attributes.value: 2330
attributes.tag: geographic location (country)
attributes.value: Spain:Central Pyrenees
attributes.tag: geographic location (depth)
attributes.value: 1 m
attributes.tag: geographic location (latitudeandlongitude)
attributes.value: 42.57 N 0.97 E
attributes.tag: investigation type
attributes.value: MIMARKS-survey
attributes.tag: library reads sequenced
attributes.value: 199
attributes.tag: library size
attributes.value: 56
attributes.tag: library vector
attributes.value: TOPO TA
attributes.tag: nitrate
attributes.value: 0
attributes.tag: nitrite
attributes.value: 0.08
attributes.tag: pcr primers
attributes.value: SAGMGC1-274F:AGG AGA AGC CCG GAG ATG GGT;SAGMGC1-446R:ATT AYC GCG GCG GCT GAC AC
attributes.tag: ph
attributes.value: 6.45
attributes.tag: project name
attributes.value: Quantification and dynamics of the new ammonia oxidizing thaumarchaeal group SAGMGC-1 in freshwater environments
attributes.tag: sample collection device or method
attributes.value: Niskin bottle
attributes.tag: sample name
attributes.value: Granotes 1 m
attributes.tag: scientific_name
attributes.value: freshwater metagenome
attributes.tag: sequence quality check
attributes.value: manually
attributes.tag: sequencing method
attributes.value: Sanger
attributes.tag: target gene
attributes.value: 16S rRNA
attributes.tag: temperature
attributes.value: 19.6
attributes.tag: total depth of water column
attributes.value: 5