title: TEDDY OU Gut MAG
organism: Parolsenella catena
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1387717546: SRR7568396,SRR7569402,SRR7558891,SRR7568241,SRR7561067,SRR7564593,SRR7564134,SRR7567504,SRR7559496,SRR7560853,SRR7566099,SRR7567165,SRR7567979,SRR7561051,SRR7560433,SRR7567684,SRR7561593,SRR7564911,SRR7558521,SRR7565645,SRR7566679,SRR7560880,SRR7569952,SRR7568495,SRR7568319,SRR7568657,SRR7567230,SRR7567231,SRR7560551,SRR7560552,SRR7568294,SRR7569329,SRR7557406
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:10:04Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T07:05:22Z
attributes.tag: External Id
attributes.value: SAMEA7433898
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:10:04Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T07:05:22Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1387717546_MAG73
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 92.11
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 1.61
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: female
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09408010,SAMN09408443,SAMN09408770,SAMN09409779,SAMN09410329,SAMN09410875,SAMN09410995,SAMN09411187,SAMN09411261,SAMN09411420,SAMN09412016,SAMN09412376,SAMN09413108,SAMN09413205,SAMN09414203,SAMN09414526,SAMN09415070,SAMN09416242,SAMN09416309,SAMN09416369,SAMN09416979,SAMN09417120,SAMN09417301,SAMN09417364,SAMN09417609,SAMN09418010,SAMN09418215,SAMN09418215,SAMN09418795,SAMN09418795,SAMN09419205,SAMN09419398,SAMN09419402
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1387717546_MAG73
attributes.tag: scientific_name
attributes.value: Parolsenella catena
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach