title: TEDDY OU Gut MAG
organism: Alistipes putredinis
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1321793540: SRR7560925,SRR7557730,SRR7560088,SRR7567982,SRR7565893,SRR7569623,SRR7559094,SRR7561427,SRR7568553,SRR7557719,SRR7565479,SRR7565579,SRR7565580,SRR7562548,SRR7562547,SRR7561672,SRR7562217,SRR7556782,SRR7559316,SRR7558724,SRR7558723,SRR7567039,SRR7562442
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:10:06Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T06:37:42Z
attributes.tag: External Id
attributes.value: SAMEA7432158
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:10:06Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T06:37:42Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1321793540_MAG65
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 96.63
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 0.96
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: male
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09408637,SAMN09408717,SAMN09409926,SAMN09409984,SAMN09412868,SAMN09412901,SAMN09413179,SAMN09413411,SAMN09413872,SAMN09413946,SAMN09414432,SAMN09414471,SAMN09414471,SAMN09414819,SAMN09414819,SAMN09415075,SAMN09415453,SAMN09415744,SAMN09415975,SAMN09417306,SAMN09417306,SAMN09418790,SAMN09419713
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1321793540_MAG65
attributes.tag: scientific_name
attributes.value: Alistipes putredinis
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach