title: TEDDY OU Gut MAG
organism: Bacteroides fragilis
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1443072149: SRR7564545,SRR7561996,SRR7563254,SRR7563253,SRR7561974,SRR7558488,SRR7568838,SRR7560218,SRR7566708,SRR7558328,SRR7558600,SRR7558556,SRR7564870,SRR7568841,SRR7568840,SRR7557179,SRR7567591,SRR7565494,SRR7567083,SRR7569218,SRR7564021,SRR7569790,SRR7567450,SRR7567874,SRR7562914,SRR7560743,SRR7561397,SRR7557465,SRR7559679,SRR7556778,SRR7568219,SRR7568218,SRR7559358,SRR7560994,SRR7564382,SRR7564729
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:10:00Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T07:33:24Z
attributes.tag: External Id
attributes.value: SAMEA7435668
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:10:00Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T07:33:24Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1443072149_MAG57
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 97.18
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 0.00
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: male
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09408431,SAMN09409040,SAMN09409530,SAMN09409530,SAMN09409699,SAMN09410484,SAMN09411355,SAMN09411410,SAMN09411483,SAMN09411680,SAMN09411877,SAMN09411957,SAMN09412748,SAMN09412779,SAMN09412779,SAMN09413097,SAMN09413589,SAMN09413929,SAMN09414440,SAMN09414659,SAMN09414730,SAMN09414817,SAMN09415466,SAMN09415727,SAMN09415993,SAMN09416438,SAMN09417560,SAMN09418508,SAMN09418515,SAMN09418721,SAMN09419084,SAMN09419084,SAMN09419537,SAMN09419765,SAMN09421111,SAMN09421203
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1443072149_MAG57
attributes.tag: scientific_name
attributes.value: Bacteroides fragilis
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach