title: TEDDY OU Gut MAG
organism: Faecalimonas nexilis
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1328137769: SRR7557615,SRR7560295,SRR7568973,SRR7561228,SRR7562626,SRR7562541,SRR7566933,SRR7568389,SRR7565503,SRR7563039,SRR7561178,SRR7557347,SRR7566317,SRR7560261,SRR7562320,SRR7568309,SRR7563844,SRR7567738,SRR7561637,SRR7565624,SRR7568325,SRR7569917,SRR7569619,SRR7563214,SRR7565036,SRR7558994,SRR7563344,SRR7568344,SRR7557917,SRR7566270,SRR7558717,SRR7567878,SRR7557026,SRR7563126,SRR7557449,SRR7568281,SRR7559089
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:10:01Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T06:40:03Z
attributes.tag: External Id
attributes.value: SAMEA7432308
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:10:01Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T06:40:03Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1328137769_MAG96
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 94.15
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 0.69
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: male
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09408206,SAMN09408725,SAMN09408766,SAMN09408776,SAMN09408849,SAMN09408892,SAMN09410206,SAMN09410228,SAMN09410662,SAMN09411126,SAMN09411406,SAMN09411648,SAMN09411663,SAMN09411880,SAMN09411916,SAMN09412447,SAMN09412942,SAMN09412995,SAMN09414359,SAMN09414663,SAMN09415275,SAMN09415384,SAMN09415502,SAMN09415936,SAMN09416144,SAMN09416952,SAMN09417074,SAMN09417121,SAMN09417941,SAMN09418301,SAMN09418333,SAMN09418457,SAMN09418961,SAMN09419642,SAMN09419785,SAMN09420569,SAMN09420640
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1328137769_MAG96
attributes.tag: scientific_name
attributes.value: Tyzzerella nexilis
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach