title: TEDDY OU Gut MAG
organism: Agathobacter rectalis
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1206891066: SRR7568568,SRR7568569,SRR7566688,SRR7569967,SRR7556968,SRR7566961,SRR7567416,SRR7568676,SRR7557979,SRR7557980,SRR7557533,SRR7569253,SRR7563792,SRR7563793,SRR7569197,SRR7569937,SRR7565971,SRR7566782,SRR7563272
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:09:57Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T05:46:41Z
attributes.tag: External Id
attributes.value: SAMEA7428707
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:09:57Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T05:46:41Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1206891066_MAG35
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 98.07
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 2.01
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: female
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09408255,SAMN09408255,SAMN09409329,SAMN09410406,SAMN09411378,SAMN09412407,SAMN09414086,SAMN09414933,SAMN09415961,SAMN09415961,SAMN09416254,SAMN09416844,SAMN09417317,SAMN09417317,SAMN09418838,SAMN09418955,SAMN09419439,SAMN09420236,SAMN09420343
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1206891066_MAG35
attributes.tag: scientific_name
attributes.value: [Eubacterium] rectale
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach