title: TEDDY OU Gut MAG
organism: Agathobacter rectalis
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1270432446: SRR7557345,SRR7568837,SRR7568836,SRR7563999,SRR7564258,SRR7564257,SRR7565497,SRR7565936,SRR7561755,SRR7568181,SRR7568183,SRR7565756,SRR7559640,SRR7559641,SRR7558949,SRR7558950,SRR7564971,SRR7560333,SRR7557712,SRR7557711,SRR7563287,SRR7559775,SRR7562415,SRR7569280,SRR7564916,SRR7569835,SRR7557377,SRR7567350,SRR7568350,SRR7565149,SRR7562663,SRR7559682,SRR7559681,SRR7565370,SRR7566491,SRR7562310,SRR7564046,SRR7562184,SRR7569328,SRR7558843
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:09:59Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T06:17:36Z
attributes.tag: External Id
attributes.value: SAMEA7430561
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:09:59Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T06:17:36Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1270432446_MAG12
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 99.52
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 0.00
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: male
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09408470,SAMN09409556,SAMN09409556,SAMN09409564,SAMN09409610,SAMN09409610,SAMN09410384,SAMN09410519,SAMN09410553,SAMN09410932,SAMN09412241,SAMN09412663,SAMN09412726,SAMN09412726,SAMN09412987,SAMN09412987,SAMN09413327,SAMN09413394,SAMN09413490,SAMN09413490,SAMN09413534,SAMN09413657,SAMN09413805,SAMN09414616,SAMN09414870,SAMN09415681,SAMN09415836,SAMN09416138,SAMN09416554,SAMN09416842,SAMN09416860,SAMN09417265,SAMN09417265,SAMN09417504,SAMN09418528,SAMN09419241,SAMN09419535,SAMN09419742,SAMN09420536,SAMN09420793
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1270432446_MAG12
attributes.tag: scientific_name
attributes.value: [Eubacterium] rectale
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach