title: TEDDY OU Gut MAG
organism: Sellimonas intestinalis
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1437366758: SRR7563159,SRR7558314,SRR7558315,SRR7558646,SRR7561242,SRR7561241,SRR7569564,SRR7569563,SRR7558977,SRR7560488,SRR7559037,SRR7559038,SRR7559956,SRR7559955,SRR7559655,SRR7559654,SRR7568108,SRR7568107,SRR7558752,SRR7558751,SRR7567415,SRR7569080,SRR7564000,SRR7564001,SRR7557737
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:09:59Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T07:30:59Z
attributes.tag: External Id
attributes.value: SAMEA7435515
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:09:59Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T07:30:59Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1437366758_MAG51
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 98.83
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 0.97
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: female
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09408622,SAMN09411171,SAMN09411171,SAMN09411235,SAMN09411986,SAMN09411986,SAMN09413123,SAMN09413123,SAMN09415506,SAMN09416004,SAMN09416249,SAMN09416249,SAMN09416832,SAMN09416832,SAMN09417150,SAMN09417150,SAMN09417737,SAMN09417737,SAMN09418682,SAMN09418682,SAMN09418739,SAMN09419618,SAMN09420318,SAMN09420318,SAMN09421147
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1437366758_MAG51
attributes.tag: scientific_name
attributes.value: Sellimonas intestinalis
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach