title: TEDDY OU Gut MAG
organism: Faecalibacterium prausnitzii
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1337114297: SRR7565952,SRR7560330,SRR7566859,SRR7563926,SRR7560860,SRR7565247,SRR7562000,SRR7568856,SRR7564996,SRR7565761,SRR7565908,SRR7565366,SRR7560897,SRR7565594,SRR7559650,SRR7559245,SRR7568124,SRR7568853,SRR7562243,SRR7561243,SRR7558715
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:10:06Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T06:43:39Z
attributes.tag: External Id
attributes.value: SAMEA7432535
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:10:06Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T06:43:39Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1337114297_MAG94
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 96.01
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 0.34
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: male
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09408385,SAMN09408593,SAMN09408626,SAMN09409267,SAMN09410002,SAMN09411304,SAMN09411431,SAMN09412055,SAMN09412404,SAMN09412996,SAMN09413970,SAMN09413988,SAMN09414514,SAMN09414544,SAMN09416195,SAMN09416586,SAMN09417612,SAMN09417652,SAMN09418311,SAMN09419919,SAMN09420270
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1337114297_MAG94
attributes.tag: scientific_name
attributes.value: Faecalibacterium prausnitzii
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach