title: TEDDY OU Gut MAG
organism: Bacteroides uniformis
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1408249292: SRR7566321,SRR7564673,SRR7560319,SRR7566258,SRR7557818,SRR7558409,SRR7567164,SRR7564629,SRR7565393,SRR7561055,SRR7556861,SRR7563812,SRR7558584,SRR7561098,SRR7564552,SRR7567002
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:10:04Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T07:14:06Z
attributes.tag: External Id
attributes.value: SAMEA7434461
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:10:04Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T07:14:06Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1408249292_MAG84
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 97.43
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 0.00
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: female
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09410972,SAMN09411147,SAMN09412158,SAMN09412273,SAMN09413637,SAMN09414684,SAMN09414891,SAMN09415159,SAMN09416353,SAMN09416964,SAMN09417386,SAMN09417422,SAMN09417717,SAMN09419291,SAMN09420052,SAMN09421066
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1408249292_MAG84
attributes.tag: scientific_name
attributes.value: Bacteroides uniformis
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach