title: TEDDY OU Gut MAG
organism: Faecalibacterium prausnitzii
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1446965511: SRR7558813,SRR7568988,SRR7568989,SRR7557963,SRR7562950,SRR7557017,SRR7557018,SRR7561742,SRR7563396,SRR7563373,SRR7563372,SRR7561270,SRR7569364,SRR7568871,SRR7568872,SRR7566846,SRR7566847,SRR7557625,SRR7557624,SRR7561211,SRR7560023,SRR7560024,SRR7563561,SRR7563562,SRR7556902,SRR7556903,SRR7565367,SRR7567410,SRR7567411,SRR7567555,SRR7567554,SRR7568638,SRR7565281,SRR7568441,SRR7568440,SRR7565958,SRR7566431,SRR7566430,SRR7561866,SRR7567506,SRR7567505,SRR7566373,SRR7566372,SRR7566873,SRR7566874,SRR7559732,SRR7562481,SRR7564705,SRR7557359,SRR7567302
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:10:04Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T07:36:29Z
attributes.tag: External Id
attributes.value: SAMEA7435862
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:10:04Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T07:36:29Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1446965511_MAG44
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 95.75
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 0.06
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: male
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09408582,SAMN09409012,SAMN09409012,SAMN09409658,SAMN09409911,SAMN09409957,SAMN09409957,SAMN09410476,SAMN09410589,SAMN09410800,SAMN09410800,SAMN09411490,SAMN09411962,SAMN09412104,SAMN09412104,SAMN09412286,SAMN09412286,SAMN09412528,SAMN09412528,SAMN09413242,SAMN09413815,SAMN09413815,SAMN09414645,SAMN09414645,SAMN09415246,SAMN09415246,SAMN09415361,SAMN09415373,SAMN09415373,SAMN09415409,SAMN09415409,SAMN09416250,SAMN09416312,SAMN09416327,SAMN09416327,SAMN09416359,SAMN09417571,SAMN09417571,SAMN09418189,SAMN09418275,SAMN09418275,SAMN09418632,SAMN09418632,SAMN09418860,SAMN09418860,SAMN09419134,SAMN09419597,SAMN09419649,SAMN09419773,SAMN09420787
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1446965511_MAG44
attributes.tag: scientific_name
attributes.value: Faecalibacterium prausnitzii
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach