title: TEDDY OU Gut MAG
organism: Anaerobutyricum hallii
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1201173889: SRR7569758,SRR7567960,SRR7569354,SRR7557371,SRR7558453,SRR7557772,SRR7568209,SRR7560869,SRR7562055,SRR7561608,SRR7567000,SRR7561512,SRR7561273,SRR7564298,SRR7565504,SRR7568094,SRR7558681,SRR7557981,SRR7569046,SRR7562960,SRR7561924
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:09:56Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T05:44:35Z
attributes.tag: External Id
attributes.value: SAMEA7428579
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:09:56Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T05:44:35Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1201173889_MAG58
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 97.93
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 0.17
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: female
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09408932,SAMN09409785,SAMN09409976,SAMN09410154,SAMN09410765,SAMN09410799,SAMN09411414,SAMN09411563,SAMN09412620,SAMN09412674,SAMN09413831,SAMN09415347,SAMN09415448,SAMN09416867,SAMN09417692,SAMN09418501,SAMN09419125,SAMN09419353,SAMN09419416,SAMN09419688,SAMN09420129
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1201173889_MAG58
attributes.tag: scientific_name
attributes.value: Anaerobutyricum hallii
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach