title: TEDDY OU Gut MAG
organism: Roseburia sp. CAG:182
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1209845520: SRR7565745,SRR7565145,SRR7565535,SRR7560342,SRR7565148,SRR7559750,SRR7565117,SRR7569479,SRR7566831,SRR7563893,SRR7558734,SRR7561277,SRR7568261,SRR7560500,SRR7569522,SRR7563575,SRR7566662,SRR7566539,SRR7560941,SRR7561752,SRR7561394
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:09:57Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T05:48:24Z
attributes.tag: External Id
attributes.value: SAMEA7428810
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:09:57Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T05:48:24Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1209845520_MAG60
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 97.42
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 1.76
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: female
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09408042,SAMN09408460,SAMN09408709,SAMN09408982,SAMN09409789,SAMN09410343,SAMN09411343,SAMN09411683,SAMN09411786,SAMN09411871,SAMN09412292,SAMN09412582,SAMN09413232,SAMN09414181,SAMN09415155,SAMN09416712,SAMN09417115,SAMN09418896,SAMN09420079,SAMN09420179,SAMN09420266
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1209845520_MAG60
attributes.tag: scientific_name
attributes.value: Roseburia sp. CAG:182
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach