title: TEDDY OU Gut MAG
organism: Anaerobutyricum hallii
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1228107378: SRR7567400,SRR7557517,SRR7568012,SRR7568011,SRR7568027,SRR7558400,SRR7562636,SRR7563476,SRR7559337,SRR7559604,SRR7557889,SRR7557890,SRR7561666,SRR7569609,SRR7561732,SRR7565452,SRR7557668,SRR7560581,SRR7557365,SRR7565463,SRR7563971,SRR7562869,SRR7563732,SRR7564484,SRR7565635,SRR7568304,SRR7563574,SRR7559739,SRR7557657,SRR7562692,SRR7567067,SRR7561094,SRR7567628,SRR7560416,SRR7558633,SRR7558203,SRR7565531,SRR7557769,SRR7557341,SRR7561627,SRR7567310,SRR7566442,SRR7566577,SRR7566578
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:09:56Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T05:58:11Z
attributes.tag: External Id
attributes.value: SAMEA7429405
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:09:56Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T05:58:11Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1228107378_MAG187
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 90.72
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 1.85
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: female
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09408444,SAMN09408502,SAMN09409181,SAMN09409181,SAMN09409442,SAMN09409482,SAMN09409589,SAMN09410013,SAMN09410560,SAMN09410623,SAMN09410693,SAMN09410693,SAMN09410957,SAMN09410970,SAMN09411035,SAMN09411443,SAMN09412490,SAMN09412705,SAMN09413491,SAMN09413620,SAMN09413939,SAMN09413992,SAMN09414170,SAMN09414533,SAMN09414562,SAMN09414765,SAMN09415330,SAMN09416384,SAMN09416555,SAMN09416978,SAMN09417273,SAMN09417371,SAMN09417971,SAMN09418001,SAMN09418246,SAMN09418374,SAMN09418673,SAMN09419284,SAMN09419363,SAMN09420213,SAMN09420531,SAMN09420958,SAMN09421184,SAMN09421184
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1228107378_MAG187
attributes.tag: scientific_name
attributes.value: Anaerobutyricum hallii
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach