title: TEDDY OU Gut MAG
organism: Agathobacter rectalis
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1334204373: SRR7558593,SRR7559933,SRR7566284,SRR7559320,SRR7557434,SRR7557433,SRR7556791,SRR7558981,SRR7569481,SRR7562363,SRR7566020,SRR7558674,SRR7561472,SRR7563280,SRR7567355,SRR7557075,SRR7566660,SRR7569251,SRR7559735,SRR7564175,SRR7562911,SRR7559368,SRR7567033,SRR7567824,SRR7568230
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:10:04Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T06:41:23Z
attributes.tag: External Id
attributes.value: SAMEA7432391
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:10:04Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T06:41:23Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1334204373_MAG10
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 97.23
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 0.00
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: female
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09408232,SAMN09408265,SAMN09408512,SAMN09409167,SAMN09409231,SAMN09409231,SAMN09410510,SAMN09412033,SAMN09414751,SAMN09414809,SAMN09414960,SAMN09415216,SAMN09416062,SAMN09417482,SAMN09418184,SAMN09418587,SAMN09418941,SAMN09419397,SAMN09419756,SAMN09419856,SAMN09420055,SAMN09420261,SAMN09420308,SAMN09420380,SAMN09420598
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1334204373_MAG10
attributes.tag: scientific_name
attributes.value: [Eubacterium] rectale
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach