title: TEDDY OU Gut MAG
organism: Sellimonas intestinalis
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1423652496: SRR7569521,SRR7558338,SRR7567021,SRR7564811,SRR7561088,SRR7568113,SRR7562144,SRR7558024,SRR7562462,SRR7565641,SRR7562347,SRR7557679,SRR7566051,SRR7565719,SRR7562075,SRR7562502,SRR7563655,SRR7557903,SRR7566304,SRR7566305,SRR7567918,SRR7565014,SRR7567645,SRR7566014,SRR7556929,SRR7561767,SRR7568403,SRR7565395
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:10:00Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T07:25:21Z
attributes.tag: External Id
attributes.value: SAMEA7435158
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:10:00Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T07:25:21Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1423652496_MAG25
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 94.40
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 1.46
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: female
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09408427,SAMN09408681,SAMN09408815,SAMN09409361,SAMN09409525,SAMN09409889,SAMN09411398,SAMN09412778,SAMN09413253,SAMN09413492,SAMN09413909,SAMN09414197,SAMN09414401,SAMN09415284,SAMN09416012,SAMN09416752,SAMN09417202,SAMN09417862,SAMN09418295,SAMN09418295,SAMN09418645,SAMN09418718,SAMN09419632,SAMN09419733,SAMN09419818,SAMN09420400,SAMN09420682,SAMN09420971
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1423652496_MAG25
attributes.tag: scientific_name
attributes.value: Sellimonas intestinalis
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach