title: TEDDY OU Gut MAG
organism: Clostridiales bacterium
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1354573462: SRR7569894,SRR7562769,SRR7568104,SRR7568103,SRR7560763,SRR7566597,SRR7566519,SRR7569356,SRR7569355,SRR7563692,SRR7563520,SRR7566798,SRR7562198,SRR7557996,SRR7558288,SRR7563420,SRR7560139,SRR7560140,SRR7557877,SRR7568682,SRR7569679,SRR7567489,SRR7556928,SRR7560145,SRR7563928,SRR7562086,SRR7563599,SRR7569859,SRR7566458,SRR7567070,SRR7557243,SRR7565496,SRR7568908,SRR7568444,SRR7567289,SRR7560586,SRR7557839,SRR7568376,SRR7564390,SRR7562742,SRR7562743,SRR7557573,SRR7559147,SRR7568503,SRR7560603
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:10:05Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T06:50:48Z
attributes.tag: External Id
attributes.value: SAMEA7432984
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:10:05Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T06:50:48Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1354573462_MAG56
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 98.39
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 1.08
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: female
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09408360,SAMN09408606,SAMN09408619,SAMN09408619,SAMN09408857,SAMN09409637,SAMN09410000,SAMN09410123,SAMN09410123,SAMN09410607,SAMN09411543,SAMN09413143,SAMN09413956,SAMN09414050,SAMN09414160,SAMN09414315,SAMN09414877,SAMN09414877,SAMN09415056,SAMN09415858,SAMN09415985,SAMN09416000,SAMN09416101,SAMN09416422,SAMN09416751,SAMN09417049,SAMN09417069,SAMN09417088,SAMN09417238,SAMN09417459,SAMN09417648,SAMN09417944,SAMN09418373,SAMN09418601,SAMN09419580,SAMN09419718,SAMN09419890,SAMN09420363,SAMN09420606,SAMN09420661,SAMN09420661,SAMN09420663,SAMN09420951,SAMN09420969,SAMN09421037
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1354573462_MAG56
attributes.tag: scientific_name
attributes.value: Clostridiales bacterium
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach