organism: Ovis aries
description: Adult Churra sheep abomasal lymph node transcriptome high-quality variants 6 - High-quality variants ( variants detected by both GATK and samtools) obtained from abomasal lymph node transcriptome of 12 adult churra sheep (6 resistant and 6 susceptible) subjected to an experimental infection with T. circumcincta and merged into a single dataset
attributes.tag: cell type
attributes.value: abomasal lymph node
attributes.tag: common name
attributes.value: sheep
attributes.tag: derived from
attributes.value: CH (Spanish Churra Sheep)
attributes.tag: geographic location (country and/or sea)
attributes.value: Spain
attributes.tag: geographic location (region and locality)
attributes.value: Castilla y Leon
attributes.tag: sample name
attributes.value: /HHJJMBBXX_6_9
attributes.tag: scientific name
attributes.value: Ovis aries
attributes.tag: sex
attributes.value: female
attributes.tag: subject
attributes.value: ALN (abomasal lymph node )
attributes.tag: submission description
attributes.value: In this project the RNA-seq technology was exploited to analyze the transcriptome of target tissues affected by the Teladorsagia circumcincta infection in two groups (6 resistsant and 6 susceptible) of adult ewes showing different statuses against gastrointestinal nematode (GIN) infection with the aim of identifying genes and variants linked to GIN infection resistance in sheep.
attributes.tag: submission identifier
attributes.value: GSB-1218
attributes.tag: submission title
attributes.value: Analysis of mucosal and abomasal lymphnode transcriptome for the identification of genes involved in nematode resistance gastrointestinal tract in adult sheep.