organism: Candidatus Methanoperedentaceae archaeon GB50
description: This sample represents a metagenome assembled genome from ERS4268470,ERR3841960,ERR3841958
attributes.tag: ENA first public
attributes.value: 2020-12-18
attributes.tag: ENA last update
attributes.value: 2020-12-18
attributes.tag: External Id
attributes.value: SAMEA7740442
attributes.tag: INSDC center alias
attributes.value: Max Planck Institute for Marine Microbiology
attributes.tag: INSDC center name
attributes.value: Max Planck Institute for Marine Microbiology
attributes.tag: INSDC first public
attributes.value: 2020-12-18T17:06:48Z
attributes.tag: INSDC last update
attributes.value: 2020-12-18T15:09:06Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: gfbio:2ba61e4a-a911-483b-ba5e-e0ad8afd3b38:HotSEEP1_E50
attributes.tag: assembly quality
attributes.value: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
attributes.tag: assembly software
attributes.value: HGAP4 and CANU
attributes.tag: binning parameters
attributes.value: Manual binning; coverage
attributes.tag: binning software
attributes.value: minimap2 -x asm10 (to reference genome)
attributes.tag: broker name
attributes.value: German Federation for Biological Data (GFBio)
attributes.tag: collection date
attributes.value: 2019-01-02
attributes.tag: completeness score
attributes.value: 95
attributes.tag: completeness software
attributes.value: Checkm
attributes.tag: contamination score
attributes.value: 3.7
attributes.tag: environment (biome)
attributes.value: urban biome [ENVO:01000249], temperate biome [ENVO:01001831]
attributes.tag: environment (feature)
attributes.value: active sulphate-reducing enrichment culturing unit [ENVO:01001826]
attributes.tag: environment (material)
attributes.value: thermophilic sediment [ENVO:01000132], sulphate-reducing sediment [ENVO:01000153], hydrothermally-influenced sediment [ENVO:01001821]
attributes.tag: geographic location (country and/or sea)
attributes.value: Germany
attributes.tag: geographic location (latitude)
attributes.value: 53.109942
attributes.tag: geographic location (longitude)
attributes.value: 8.847778
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: anoxic ethane-degrading enrichment at 50 degrees Celsius derived from thermophilic sediment
attributes.tag: metagenomic source
attributes.value: marine sediment metagenome
attributes.tag: project name
attributes.value: Anaerobic ethane oxidation by archaea in the Guaymas Basin
attributes.tag: sample derived from
attributes.value: ERS4268470,ERR3841960,ERR3841958
attributes.tag: sample name
attributes.value: gfbio:2ba61e4a-a911-483b-ba5e-e0ad8afd3b38:HotSEEP1_E50
attributes.tag: sequencing method
attributes.value: PacBio Sequel
attributes.tag: taxonomic identity marker
attributes.value: 16S