title: TEDDY OU Gut MAG
organism: Bacteroides xylanisolvens
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1875431031: SRR7567433,SRR7566954,SRR7564887,SRR7567552,SRR7567551,SRR7567306,SRR7568547,SRR7568175,SRR7560003,SRR7566352,SRR7568270,SRR7564806,SRR7560931,SRR7567987,SRR7564274,SRR7558341,SRR7560391,SRR7564690,SRR7563507,SRR7561952,SRR7565192,SRR7568255,SRR7562211,SRR7557245
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:10:05Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T10:36:30Z
attributes.tag: External Id
attributes.value: SAMEA7447291
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:10:05Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T10:36:30Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1875431031_MAG67
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 96.55
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 0.43
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: female
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09409250,SAMN09409390,SAMN09409973,SAMN09410292,SAMN09410292,SAMN09410665,SAMN09411070,SAMN09411944,SAMN09412150,SAMN09412157,SAMN09412539,SAMN09412852,SAMN09413848,SAMN09415368,SAMN09415462,SAMN09416139,SAMN09416159,SAMN09417095,SAMN09417384,SAMN09417494,SAMN09417765,SAMN09420298,SAMN09420488,SAMN09420644
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1875431031_MAG67
attributes.tag: scientific_name
attributes.value: Bacteroides xylanisolvens
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach