title: TEDDY OU Gut MAG
organism: Anaerobutyricum hallii
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1847282805: SRR7557319,SRR7569993,SRR7562878,SRR7565753,SRR7565776,SRR7567855,SRR7565811,SRR7556933,SRR7569787,SRR7557142,SRR7568893,SRR7560098,SRR7568449,SRR7558785,SRR7567706,SRR7566300,SRR7562848,SRR7569338,SRR7560120,SRR7560243,SRR7566802,SRR7569601
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:10:07Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T10:24:59Z
attributes.tag: External Id
attributes.value: SAMEA7446559
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:10:07Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T10:24:59Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1847282805_MAG5
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 96.98
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 2.03
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: male
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09409471,SAMN09409490,SAMN09410079,SAMN09410211,SAMN09411073,SAMN09411901,SAMN09412279,SAMN09412940,SAMN09413029,SAMN09413415,SAMN09414629,SAMN09415862,SAMN09416914,SAMN09417345,SAMN09418382,SAMN09419105,SAMN09419385,SAMN09419564,SAMN09419745,SAMN09419755,SAMN09419987,SAMN09420831
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1847282805_MAG5
attributes.tag: scientific_name
attributes.value: Anaerobutyricum hallii
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach