title: TEDDY OU Gut MAG
organism: Parasutterella excrementihominis
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1860957641: SRR7561822,SRR7560903,SRR7565512,SRR7562944,SRR7566911,SRR7567266,SRR7569613,SRR7569279,SRR7566969,SRR7566735,SRR7557960,SRR7569006,SRR7566122,SRR7569501,SRR7560532,SRR7561787,SRR7557188,SRR7559137,SRR7565448,SRR7560905,SRR7557037,SRR7565505,SRR7569398,SRR7564374,SRR7557990,SRR7557736,SRR7568994,SRR7561000,SRR7569255,SRR7566462,SRR7559945,SRR7561688,SRR7560627,SRR7557474
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:10:07Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T10:29:29Z
attributes.tag: External Id
attributes.value: SAMEA7446844
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:10:07Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T10:29:29Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1860957641_MAG136
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 98.64
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 0.74
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: male
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09408623,SAMN09408861,SAMN09409198,SAMN09409629,SAMN09409660,SAMN09410015,SAMN09410146,SAMN09410442,SAMN09411692,SAMN09412069,SAMN09412419,SAMN09412577,SAMN09412600,SAMN09412856,SAMN09413142,SAMN09413248,SAMN09413300,SAMN09413628,SAMN09413867,SAMN09414087,SAMN09414117,SAMN09414322,SAMN09416213,SAMN09416239,SAMN09416368,SAMN09416485,SAMN09416562,SAMN09417260,SAMN09417318,SAMN09418428,SAMN09419199,SAMN09419993,SAMN09420258,SAMN09420523
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1860957641_MAG136
attributes.tag: scientific_name
attributes.value: Parasutterella excrementihominis
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach