title: TEDDY OU Gut MAG
organism: Roseburia faecis
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1861181419: SRR7561340,SRR7557988,SRR7561210,SRR7557390,SRR7561645,SRR7557531,SRR7562860,SRR7557928,SRR7568827,SRR7562012,SRR7566952,SRR7566953,SRR7567634,SRR7564529,SRR7567998,SRR7562158,SRR7562159,SRR7569385,SRR7560397,SRR7560398,SRR7563112,SRR7566808,SRR7559722,SRR7568815,SRR7569990,SRR7569991,SRR7559911,SRR7557373,SRR7569362,SRR7569361,SRR7569363,SRR7561378,SRR7559634,SRR7565104,SRR7569812,SRR7561557,SRR7561613,SRR7569747,SRR7569746,SRR7564988,SRR7561779,SRR7560531,SRR7557887,SRR7557886,SRR7562765,SRR7568790,SRR7568791
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:10:07Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T10:30:57Z
attributes.tag: External Id
attributes.value: SAMEA7446939
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:10:07Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T10:30:57Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1861181419_MAG91
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 98.05
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 1.45
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: female
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09408394,SAMN09408991,SAMN09409038,SAMN09409975,SAMN09411452,SAMN09411849,SAMN09412357,SAMN09412783,SAMN09413110,SAMN09413482,SAMN09413527,SAMN09413527,SAMN09413986,SAMN09414048,SAMN09414082,SAMN09414666,SAMN09414666,SAMN09414723,SAMN09415247,SAMN09415247,SAMN09415446,SAMN09415643,SAMN09415855,SAMN09415997,SAMN09416748,SAMN09416748,SAMN09416883,SAMN09417098,SAMN09417471,SAMN09417471,SAMN09417471,SAMN09418292,SAMN09418371,SAMN09418470,SAMN09418562,SAMN09418720,SAMN09418944,SAMN09419055,SAMN09419055,SAMN09419072,SAMN09419757,SAMN09419800,SAMN09420573,SAMN09420573,SAMN09421172,SAMN09421186,SAMN09421186
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1861181419_MAG91
attributes.tag: scientific_name
attributes.value: Roseburia faecis
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach