title: TEDDY OU Gut MAG
organism: Faecalimonas nexilis
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1897582388: SRR7558797,SRR7558798,SRR7562793,SRR7565725,SRR7565724,SRR7565726,SRR7563681,SRR7563404,SRR7563405,SRR7560186,SRR7560185,SRR7556927,SRR7556926,SRR7566195,SRR7566194,SRR7561157,SRR7561156,SRR7566821,SRR7566820,SRR7561908,SRR7561907,SRR7561054,SRR7569846,SRR7562959,SRR7558216,SRR7558215,SRR7567980,SRR7564124,SRR7557234,SRR7562894,SRR7562444,SRR7562445,SRR7562443,SRR7561331,SRR7567311,SRR7560180,SRR7560181,SRR7562276,SRR7568016,SRR7559773,SRR7567163,SRR7567162,SRR7564950,SRR7564951,SRR7569857,SRR7557578,SRR7561135,SRR7558249,SRR7557275,SRR7561566,SRR7561567,SRR7567851,SRR7567850,SRR7566841,SRR7557969,SRR7557968,SRR7568357,SRR7558124,SRR7558125,SRR7564662,SRR7564663,SRR7558883
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:09:59Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T10:43:01Z
attributes.tag: External Id
attributes.value: SAMEA7447688
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:09:59Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T10:43:01Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1897582388_MAG67
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 98.73
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 0.00
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: male
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09408036,SAMN09408036,SAMN09408150,SAMN09408331,SAMN09408331,SAMN09408331,SAMN09408796,SAMN09408839,SAMN09408839,SAMN09409382,SAMN09409382,SAMN09410527,SAMN09410527,SAMN09410566,SAMN09410566,SAMN09410758,SAMN09410758,SAMN09410868,SAMN09410868,SAMN09410900,SAMN09410900,SAMN09410971,SAMN09411764,SAMN09412205,SAMN09413044,SAMN09413044,SAMN09413906,SAMN09414261,SAMN09414963,SAMN09415358,SAMN09415377,SAMN09415377,SAMN09415377,SAMN09415851,SAMN09415899,SAMN09416022,SAMN09416022,SAMN09416569,SAMN09417312,SAMN09417710,SAMN09418586,SAMN09418586,SAMN09418884,SAMN09418884,SAMN09419298,SAMN09419832,SAMN09419892,SAMN09420011,SAMN09420014,SAMN09420106,SAMN09420106,SAMN09420156,SAMN09420156,SAMN09420462,SAMN09420691,SAMN09420691,SAMN09420945,SAMN09420959,SAMN09420959,SAMN09421040,SAMN09421040,SAMN09421051
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1897582388_MAG67
attributes.tag: scientific_name
attributes.value: Tyzzerella nexilis
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach