title: TEDDY OU Gut MAG
organism: uncultured Eubacteriales bacterium
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1851696129: SRR7562741,SRR7560073,SRR7561037,SRR7568145,SRR7569186,SRR7558901,SRR7566528,SRR7556906,SRR7560503,SRR7568192,SRR7557560,SRR7564162,SRR7566297,SRR7569620,SRR7557848,SRR7564319,SRR7558353,SRR7565644,SRR7567451,SRR7569512,SRR7569513,SRR7568854,SRR7561749,SRR7563414,SRR7563415,SRR7563486
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:10:07Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T10:26:39Z
attributes.tag: External Id
attributes.value: SAMEA7446667
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:10:07Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T10:26:39Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1851696129_MAG95
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 95.80
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 0.70
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: female
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09408253,SAMN09409013,SAMN09409640,SAMN09410649,SAMN09411205,SAMN09411268,SAMN09413859,SAMN09415924,SAMN09415947,SAMN09416151,SAMN09416363,SAMN09416688,SAMN09416937,SAMN09417001,SAMN09417092,SAMN09417344,SAMN09417352,SAMN09417424,SAMN09417911,SAMN09418724,SAMN09418724,SAMN09419267,SAMN09420203,SAMN09420383,SAMN09420383,SAMN09420582
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1851696129_MAG95
attributes.tag: scientific_name
attributes.value: uncultured Clostridiales bacterium
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach