title: TEDDY OU Gut MAG
organism: Enterococcus hirae
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1823039663: SRR7561230,SRR7566185,SRR7559243,SRR7563619,SRR7564276,SRR7559651,SRR7569097,SRR7561188,SRR7569181,SRR7568559,SRR7561641,SRR7562683,SRR7557213,SRR7560277,SRR7563011,SRR7567110,SRR7561976,SRR7562080,SRR7565072,SRR7565564,SRR7562095,SRR7563595,SRR7567865,SRR7559362,SRR7569121,SRR7560418,SRR7563459,SRR7560176,SRR7567391,SRR7567038,SRR7562940,SRR7559789,SRR7561467,SRR7558356,SRR7568490,SRR7561810,SRR7557741,SRR7564114,SRR7557205
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:10:03Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T10:11:37Z
attributes.tag: External Id
attributes.value: SAMEA7445720
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:10:03Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T10:11:37Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1823039663_MAG141
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 96.00
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 1.23
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: female
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09409366,SAMN09409693,SAMN09410277,SAMN09410654,SAMN09410727,SAMN09410839,SAMN09411482,SAMN09411576,SAMN09411724,SAMN09412314,SAMN09412385,SAMN09412523,SAMN09413390,SAMN09413419,SAMN09413514,SAMN09414001,SAMN09414168,SAMN09414208,SAMN09414435,SAMN09414711,SAMN09416185,SAMN09416313,SAMN09416341,SAMN09416342,SAMN09416446,SAMN09416728,SAMN09416801,SAMN09416888,SAMN09416925,SAMN09417029,SAMN09417249,SAMN09417760,SAMN09418268,SAMN09418283,SAMN09418346,SAMN09419021,SAMN09419194,SAMN09419275,SAMN09420198
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1823039663_MAG141
attributes.tag: scientific_name
attributes.value: Enterococcus hirae
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach