title: TEDDY OU Gut MAG
organism: Agathobaculum butyriciproducens
description: This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1867865604: SRR7561436,SRR7562079,SRR7559587,SRR7561342,SRR7557415,SRR7568675,SRR7567447,SRR7563987,SRR7558601,SRR7560688,SRR7558105,SRR7559146,SRR7567813,SRR7569090,SRR7557959,SRR7562295,SRR7558271,SRR7556897,SRR7566764,SRR7567285,SRR7567286,SRR7564906,SRR7559530,SRR7561187,SRR7565021,SRR7565974,SRR7558346,SRR7560736,SRR7565408,SRR7557720,SRR7568879,SRR7558624,SRR7557463,SRR7567124,SRR7565892,SRR7566210,SRR7558019,SRR7563705,SRR7566202
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2021-01-30T04:10:08Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2020-10-15T10:32:45Z
attributes.tag: External Id
attributes.value: SAMEA7447053
attributes.tag: INSDC center name
attributes.value: Pan Lab at OU
attributes.tag: INSDC first public
attributes.value: 2021-01-30T04:10:08Z
attributes.tag: INSDC last update
attributes.value: 2020-10-15T10:32:45Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2; v2.3.5.1
attributes.tag: Submitter Id
attributes.value: TEDDY_OU_SUBJ1867865604_MAG14
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: SPAdes;3.13.1;default parameters with metaSPAdes mode
attributes.tag: binning parameters
attributes.value: --minContig 2000
attributes.tag: binning software
attributes.value: MetaBAT;2.12.1
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 90.60
attributes.tag: completeness software
attributes.value: CheckM;v1.0.13
attributes.tag: contamination score
attributes.value: 0.67
attributes.tag: environment (biome)
attributes.value: human gut
attributes.tag: environment (feature)
attributes.value: human gut
attributes.tag: environment (material)
attributes.value: fecal
attributes.tag: geographic location (country and/or sea)
attributes.value: restricted access
attributes.tag: geographic location (latitude)
attributes.value: restricted access
attributes.tag: geographic location (longitude)
attributes.value: restricted access
attributes.tag: host sex
attributes.value: male
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: human gut
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: PRJEB40730
attributes.tag: sample derived from
attributes.value: SAMN09408596,SAMN09409163,SAMN09409236,SAMN09409318,SAMN09409386,SAMN09410077,SAMN09410387,SAMN09410863,SAMN09411058,SAMN09411777,SAMN09411876,SAMN09412520,SAMN09412647,SAMN09413273,SAMN09413442,SAMN09413712,SAMN09414005,SAMN09414071,SAMN09414085,SAMN09414312,SAMN09414312,SAMN09414668,SAMN09414677,SAMN09415669,SAMN09415881,SAMN09416091,SAMN09416955,SAMN09416969,SAMN09417079,SAMN09417132,SAMN09418002,SAMN09418684,SAMN09419111,SAMN09419622,SAMN09419708,SAMN09420046,SAMN09420260,SAMN09420515,SAMN09421056
attributes.tag: sample name
attributes.value: TEDDY_OU_SUBJ1867865604_MAG14
attributes.tag: scientific_name
attributes.value: Agathobaculum butyriciproducens
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic classification
attributes.value: GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach