title: Ashwellthorpe (AT2) RNA-seq reads alignment against v1 KW1 contigs
organism: Hymenoscyphus fraxineus
description: RNA-Seq of Hymenoscyphus fraxineus isolated from Ashwellthorpe wood, Norfolk, England. Sequences from AT2 are aligned to Kenninghall wood (KW1) version 1 contigs (available at https://github.com/ash-dieback-crowdsource/data/blob/master/ash_dieback/chalara_fraxinea/Kenninghall_wood_KW1/assemblies/gDNA/KW1_assembly_version1/Chalara_fraxinea_TGAC_s1v1_contigs.fa) using BWA mem v 0.7.4.
attributes.tag: ENA first public
attributes.value: 2015-01-16
attributes.tag: ENA last update
attributes.value: 2015-01-08
attributes.tag: External Id
attributes.value: SAMEA3183568
attributes.tag: INSDC center alias
attributes.value: THE SAINSBURY LABORATORY
attributes.tag: INSDC center name
attributes.value: THE SAINSBURY LABORATORY
attributes.tag: INSDC first public
attributes.value: 2015-01-16T17:01:40Z
attributes.tag: INSDC last update
attributes.value: 2015-01-08T16:16:44Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: AT2_RNA-seq BWA mem
attributes.tag: collected by
attributes.value: Diane Saunders, Kentaro Yoshida
attributes.tag: geographic location (country and/or sea)
attributes.value: United Kingdom: England
attributes.tag: host
attributes.value: Fraxinus excelsior
attributes.tag: isolation source
attributes.value: branch cross section, pith material
attributes.tag: lat lon
attributes.value: 52.538387 N 1.152577 E
attributes.tag: sample name
attributes.value: AT2_RNA-seq BWA mem