title: amoA_TWW_spring
organism: soil metagenome
description: ammonia oxidizing bacterial community in soil irrigated by TWW at the end of spring
attributes.tag: ENA first public
attributes.value: 2014-08-08
attributes.tag: ENA last update
attributes.value: 2016-10-21
attributes.tag: External Id
attributes.value: SAMEA2586511
attributes.tag: INSDC center alias
attributes.value: ARO-VOLCANI
attributes.tag: INSDC center name
attributes.value: Agricultural Research Organization, Volcani Center, Israel
attributes.tag: INSDC first public
attributes.value: 2014-08-08T17:01:15Z
attributes.tag: INSDC last update
attributes.value: 2016-10-21T09:33:16Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: Kedma_amoA_11
attributes.tag: collection date
attributes.value: 2010-04-28
attributes.tag: depth
attributes.value: 0.1
attributes.tag: environment (biome)
attributes.value: Olive orchard
attributes.tag: environment (feature)
attributes.value: bulk soil
attributes.tag: environment (material)
attributes.value: soil
attributes.tag: geographic location (country and/or sea)
attributes.value: Israel
attributes.tag: geographic location (elevation)
attributes.value: 200
attributes.tag: geographic location (latitude)
attributes.value: 31.69804
attributes.tag: geographic location (longitude)
attributes.value: 34.76554
attributes.tag: investigation type
attributes.value: metagenome
attributes.tag: nucleic acid extraction
attributes.value: as specified in: Inbar, E., Green, S.J., Hadar, Y., and Minz, D. (2005) Competing factors of compost concentration and proximity to root affect the distribution of streptomycetes. Microb. Ecol. 50: 73-81
attributes.tag: pcr primers
attributes.value: : amoA-1F, GGG GTT TCT ACT GGT GGT and amoA-2R, CCC CTC KGS AAA GCC TTC TTC (Rotthauwe et al., 1997).
attributes.tag: project name
attributes.value: Kedma amoA
attributes.tag: sample name
attributes.value: Kedma_amoA_11
attributes.tag: sequencing method
attributes.value: 454 tag-encoded FLX 16S rDNA amplicon pyrosequencing (bTEFAP)
attributes.tag: soil environmental package
attributes.value: soil
attributes.tag: target gene
attributes.value: bacterial amoA