title: P1_S_T09
organism: human oral metagenome
description: Patient_1 Saliva T9
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2018-08-29T17:02:02Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2018-04-13T11:07:03Z
attributes.tag: External Id
attributes.value: SAMEA104229693
attributes.tag: INSDC center name
attributes.value: GFBIO
attributes.tag: INSDC first public
attributes.value: 2018-08-29T17:02:02Z
attributes.tag: INSDC last update
attributes.value: 2018-04-13T11:07:03Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: 2405:c9df40ed-d1b8-46cc-abd4-bfd18db285b0
attributes.tag: broker name
attributes.value: GFBIO
attributes.tag: chimera check
attributes.value: Uchime
attributes.tag: collection date
attributes.value: 2015-08-11
attributes.tag: environment (biome)
attributes.value: anthropogenic terrestrial biome [ENVO:01000219]
attributes.tag: environment (feature)
attributes.value: mouth [UBERON:0000165]
attributes.tag: environment (material)
attributes.value: saliva [UBERON:0001836]
attributes.tag: geographic location (country and/or sea)
attributes.value: Belgium
attributes.tag: geographic location (latitude)
attributes.value: 51.0256
attributes.tag: geographic location (longitude)
attributes.value: 3.72885
attributes.tag: host age
attributes.value: 8
attributes.tag: host body product
attributes.value: saliva
attributes.tag: host disease status
attributes.value: Burkitt lymphoma
attributes.tag: host sex
attributes.value: male
attributes.tag: host subject id
attributes.value: P1
attributes.tag: human oral environmental package
attributes.value: human-oral
attributes.tag: investigation type
attributes.value: mimarks-survey
attributes.tag: nucleic acid extraction
attributes.value: PMID 22515215
attributes.tag: pcr conditions
attributes.value: initial denaturation:96degC_2min; annealing:96degC_15s; elongation: 50degC_50s; final elongation:70degC_90s
attributes.tag: pcr primers
attributes.value: FWD:NNNNNNNNNTCCTACGGGNGGCWGCAG; REV:NNNNNNNNNNTGACTACHVGGGTATCTAAKCC
attributes.tag: project name
attributes.value: Patientstudy_oral_mucositis
attributes.tag: sample name
attributes.value: 2405:c9df40ed-d1b8-46cc-abd4-bfd18db285b0
attributes.tag: sample storage temperature
attributes.value: -20
attributes.tag: scientific_name
attributes.value: human oral metagenome
attributes.tag: sequencing method
attributes.value: Illumina sequencing
attributes.tag: target gene
attributes.value: 16S rRNA
attributes.tag: target subfragment
attributes.value: V3-V4