organism: Heterodera sacchari
description: Transcriptome analysis of the sugarcane cyst nematode Heterodera sacchari shows signatures of adaptation to a monocot host: Heterodera sacchari, the sugar cane cyst nematode, is a serious pathogen of rice crops but is relatively neglected compared to other nematodes. To address this we have sequenced the transcriptome of invasive stage and parasitic stage nematodes. Analysis of effectors from this transcriptome revealed signatures of adaptation to parasitism of monocots, including loss of GH53 cell wall degrading enzymes.
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2018-09-01T17:03:18Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2018-08-01T11:43:42Z
attributes.tag: External Id
attributes.value: SAMEA4811321
attributes.tag: INSDC center name
attributes.value: The James Hutton Institute
attributes.tag: INSDC first public
attributes.value: 2018-09-01T17:03:18Z
attributes.tag: INSDC last update
attributes.value: 2018-08-01T11:43:42Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: Heterodera sacchari RNAseq1
attributes.tag: cell type
attributes.value: Whole nematode
attributes.tag: collected by
attributes.value: somnath pokhare
attributes.tag: dev stage
attributes.value: J2 and femal 15 day post infection
attributes.tag: host scientific name
attributes.value: Oryza sativa
attributes.tag: sample name
attributes.value: Heterodera sacchari RNAseq1
attributes.tag: scientific_name
attributes.value: Heterodera sacchari