title: 13338.St.chronic.GLD019.T
attributes.tag: ENA first public
attributes.value: 2021-04-17
attributes.tag: ENA last update
attributes.value: 2020-11-24
attributes.tag: External Id
attributes.value: SAMEA7617016
attributes.tag: INSDC center alias
attributes.value: UCSDMI
attributes.tag: INSDC center name
attributes.value: University of California San Diego Microbiome Initiative
attributes.tag: INSDC first public
attributes.value: 2021-04-17T00:26:13Z
attributes.tag: INSDC last update
attributes.value: 2020-11-24T22:15:11Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13338:13338.St.chronic.GLD019.T
attributes.tag: abdominal_distension_new
attributes.value: 1
attributes.tag: abdominal_pain_24hr_new
attributes.value: NO
attributes.tag: abdominal_pains_new
attributes.value: 1
attributes.tag: abx_non_exclusion
attributes.value: No
attributes.tag: acid_regurgitation_new
attributes.value: 1
attributes.tag: adiponectin
attributes.value: 28.1
attributes.tag: alcohol_g_usda
attributes.value: 5.58
attributes.tag: alpha_carotene_mcg_usda
attributes.value: 199.38
attributes.tag: art_years
attributes.value: 24
attributes.tag: arv_ccr5_antagonist
attributes.value: NO
attributes.tag: arv_ii
attributes.value: NO
attributes.tag: arv_nnrti
attributes.value: YES
attributes.tag: arv_nrti
attributes.value: YES
attributes.tag: arv_pe
attributes.value: NO
attributes.tag: arv_pi
attributes.value: NO
attributes.tag: beta_carotene_mcg_usda
attributes.value: 1446.91
attributes.tag: beta_cryptoxanthin_mcg_usda
attributes.value: 89.7
attributes.tag: bloating_24hr_new
attributes.value: NO
attributes.tag: borborygmus_new
attributes.value: 1
attributes.tag: bristol_stool_scale_sample
attributes.value: 5
attributes.tag: caffeine_mg_usda
attributes.value: 579.54
attributes.tag: calcium_mg_usda
attributes.value: 1230.18
attributes.tag: carbohydrate_g_usda
attributes.value: 430.96
attributes.tag: cd4_cd38_single_positive_cells
attributes.value: 63
attributes.tag: cd4_count
attributes.value: 177
attributes.tag: cd4_hladr_cd38_percent
attributes.value: 5
attributes.tag: cd4_hladr_single_positive_cells
attributes.value: 3
attributes.tag: cd4_nadir
attributes.value: not collected
attributes.tag: cd4_percent
attributes.value: 19
attributes.tag: cd8_cd38_single_positive_cells
attributes.value: 26
attributes.tag: cd8_count
attributes.value: 503
attributes.tag: cd8_hladr_cd38_percent
attributes.value: 10
attributes.tag: cd8_hladr_single_positive_cells
attributes.value: 9
attributes.tag: cd8_percent
attributes.value: 54
attributes.tag: cholesterol_drugs_1mo
attributes.value: No
attributes.tag: cholesterol_mg_usda
attributes.value: 279.84
attributes.tag: cohort
attributes.value: HIV treated
attributes.tag: collection_timestamp
attributes.value: 2/18/15
attributes.tag: constipation_24hr_new
attributes.value: NO
attributes.tag: copper_mg_usda
attributes.value: 2.02
attributes.tag: crp_ng_ml
attributes.value: 1594.714373
attributes.tag: current_art
attributes.value: atripla
attributes.tag: current_art_start_date
attributes.value: 1/1/11
attributes.tag: decreased_stools_new
attributes.value: 1
attributes.tag: dietary_fiber_g_usda
attributes.value: 21.78
attributes.tag: elevation
attributes.value: 5,403
attributes.tag: empo_1
attributes.value: Host-associated
attributes.tag: empo_2
attributes.value: Animal-associated
attributes.tag: empo_3
attributes.value: Animal distal gut
attributes.tag: energy_kcal_usda
attributes.value: 3187.47
attributes.tag: env biome
attributes.value: Urban Biome
attributes.tag: env feature
attributes.value: Human-associated habitat
attributes.tag: env package
attributes.value: human-gut
attributes.tag: env_material
attributes.value: feces
attributes.tag: eructation_new
attributes.value: 1
attributes.tag: excess_gas_24hr_new
attributes.value: NO
attributes.tag: five_opposite_sex_partners_6mo_new
attributes.value: not collected
attributes.tag: folate_dfe_mcg_usda
attributes.value: 624.92
attributes.tag: folic_acid_mcg_usda
attributes.value: 206.96
attributes.tag: food_folate_mcg_usda
attributes.value: 272.91
attributes.tag: gender
attributes.value: male
attributes.tag: gi_summary_score
attributes.value: 1.142857143
attributes.tag: glucose
attributes.value: 80
attributes.tag: gm_csf_pg_ml
attributes.value: 0.115984343
attributes.tag: gramwt_g_usda
attributes.value: 4972.87
attributes.tag: hard_stools_new
attributes.value: 2
attributes.tag: hdl
attributes.value: 55
attributes.tag: heartburn_new
attributes.value: 1
attributes.tag: hispanic
attributes.value: No
attributes.tag: host age
attributes.value: 47
attributes.tag: host body habitat
attributes.value: colon
attributes.tag: host body mass index
attributes.value: 23.1
attributes.tag: host body product
attributes.value: feces
attributes.tag: host common name
attributes.value: human
attributes.tag: host height
attributes.value: 186
attributes.tag: host scientific name
attributes.value: Homo sapiens
attributes.tag: host subject id
attributes.value: HIV054
attributes.tag: host taxid
attributes.value: 9606
attributes.tag: host weight
attributes.value: 80
attributes.tag: host_age_units
attributes.value: years
attributes.tag: host_height_units
attributes.value: cm
attributes.tag: host_weight_units
attributes.value: kg
attributes.tag: icam_1_ng_ml
attributes.value: 217.4134542
attributes.tag: ifabp_pg_ml
attributes.value: 724.73
attributes.tag: il_10_pg_ml
attributes.value: 239.2773303
attributes.tag: il_12_23p40_pg_ml
attributes.value: 61.42576735
attributes.tag: il_15_pg_ml
attributes.value: 4.637331418
attributes.tag: il_16_pg_ml
attributes.value: 543.6905509
attributes.tag: il_17a_pg_ml
attributes.value: 1.62248992
attributes.tag: il_22_pg_ml
attributes.value: 338.7435479
attributes.tag: il_6_pg_ml
attributes.value: 251.3155885
attributes.tag: il_7_pg_ml
attributes.value: 15.04830443
attributes.tag: incomplete_evacuation_new
attributes.value: 1
attributes.tag: increased_flatus_new
attributes.value: 2
attributes.tag: increased_stools_new
attributes.value: 1
attributes.tag: initial_art_start_date
attributes.value: 1991
attributes.tag: insulin
attributes.value: 3
attributes.tag: intercourse_w_hiv_partner_12mo_new
attributes.value: not collected
attributes.tag: intercourse_w_ivdu_partner_12mo_new
attributes.value: not collected
attributes.tag: iron_mg_usda
attributes.value: 17.44
attributes.tag: ivdu_12mo_new
attributes.value: not collected
attributes.tag: ivdu_ever_new
attributes.value: not collected
attributes.tag: lattitude
attributes.value: 39.742 N
attributes.tag: lbp_ng_ml
attributes.value: 10932.43243
attributes.tag: ldl
attributes.value: 110
attributes.tag: leptin
attributes.value: 2.9
attributes.tag: lognitude
attributes.value: 104.838 W
attributes.tag: loose_stools_24hr_new
attributes.value: NO
attributes.tag: loose_stools_diarrhea_new
attributes.value: 1
attributes.tag: lutein_zeaxanthin_mcg_usda
attributes.value: 1324.91
attributes.tag: lycopene_mcg_usda
attributes.value: 12049.17
attributes.tag: lymphocyte_count
attributes.value: 931
attributes.tag: lymphocyte_percent
attributes.value: 17.9
attributes.tag: magnesium_mg_usda
attributes.value: 431.65
attributes.tag: mcp_1_pg_ml
attributes.value: 6306.480116
attributes.tag: metab_disease_score_binary
attributes.value: LOW
attributes.tag: metabolic_disease_score
attributes.value: 0.678531642
attributes.tag: metabolome_data
attributes.value: Yes
attributes.tag: metformin_1mo
attributes.value: No
attributes.tag: mfa_16_1_hexadecenoic_acid_g_usda
attributes.value: 1.49
attributes.tag: mfa_18_1_octadecenoic_acid_g_usda
attributes.value: 41.59
attributes.tag: mfa_20_1_eicosenoic_acid_g_usda
attributes.value: 0.46
attributes.tag: mfa_22_1_docosenoic_acid_g_usda
attributes.value: 0.08
attributes.tag: money_drugs_gifts_for_sex_12mo_new
attributes.value: not collected
attributes.tag: mped_a_bev_usda
attributes.value: 0.42
attributes.tag: mped_add_sug_usda
attributes.value: 47.03
attributes.tag: mped_dairy_cheese_usda
attributes.value: 0.85
attributes.tag: mped_dairy_milk_usda
attributes.value: 1.57
attributes.tag: mped_dairy_total_usda
attributes.value: 2.43
attributes.tag: mped_dairy_yogurt_usda
attributes.value: 0.01
attributes.tag: mped_discfat_oil_usda
attributes.value: 33.29
attributes.tag: mped_discfat_sol_usda
attributes.value: 58.13
attributes.tag: mped_fruit_citmlb_usda
attributes.value: 0.43
attributes.tag: mped_fruit_other_usda
attributes.value: 0.69
attributes.tag: mped_fruit_total_usda
attributes.value: 1.12
attributes.tag: mped_grain_nwhl_usda
attributes.value: 7.81
attributes.tag: mped_grain_total_usda
attributes.value: 8.24
attributes.tag: mped_grain_whl_usda
attributes.value: 0.43
attributes.tag: mped_legumes_usda
attributes.value: 0.05
attributes.tag: mped_m_egg_usda
attributes.value: 0.28
attributes.tag: mped_m_fish_hi_usda
attributes.value: 0.71
attributes.tag: mped_m_fish_lo_usda
attributes.value: 0.57
attributes.tag: mped_m_frank_usda
attributes.value: 0.21
attributes.tag: mped_m_meat_usda
attributes.value: 1.83
attributes.tag: mped_m_mpf_usda
attributes.value: 4.52
attributes.tag: mped_m_nutsd_usda
attributes.value: 3.22
attributes.tag: mped_m_organ_usda
attributes.value: 0.01
attributes.tag: mped_m_poult_usda
attributes.value: 1.19
attributes.tag: mped_m_soy_usda
attributes.value: 0.03
attributes.tag: mped_vegetable_dpyel_usda
attributes.value: 0.03
attributes.tag: mped_vegetable_drkgr_usda
attributes.value: 0.03
attributes.tag: mped_vegetable_other_usda
attributes.value: 1.7
attributes.tag: mped_vegetable_potato_usda
attributes.value: 0.16
attributes.tag: mped_vegetable_starcy_usda
attributes.value: 0.02
attributes.tag: mped_vegetable_tomato_usda
attributes.value: 0.62
attributes.tag: mped_vegetable_total_usda
attributes.value: 2.56
attributes.tag: nadir_date
attributes.value: not collected
attributes.tag: nadir_report
attributes.value: not collected
attributes.tag: nadir_years
attributes.value: not collected
attributes.tag: nausea_vomiting_24hr_new
attributes.value: YES
attributes.tag: nausea_vomiting_new
attributes.value: 1
attributes.tag: new_sti_12mo_new
attributes.value: not collected
attributes.tag: niacin_mg_usda
attributes.value: 28.88
attributes.tag: no_symptoms_24hr_new
attributes.value: NO
attributes.tag: orientation_new
attributes.value: not collected
attributes.tag: pfa_18_2_octadecadienoic_acid_g_usda
attributes.value: 21.56
attributes.tag: pfa_18_3_octadecatrienoic_acig_g_usda
attributes.value: 1.83
attributes.tag: pfa_18_4_octadecatetraenoic_acid_g_usda
attributes.value: 0.02
attributes.tag: pfa_20_4_eicosatetraenoic_acid_g_usda
attributes.value: 0.14
attributes.tag: pfa_20_5_eicosapentaenoic_acid_g_usda
attributes.value: 0.1
attributes.tag: pfa_22_5_docosapentaenoic_acid_g_usda
attributes.value: 0.03
attributes.tag: pfa_22_6_docosahexaenoic_acid_g_usda
attributes.value: 0.18
attributes.tag: phosphorus_mg_usda
attributes.value: 1858.35
attributes.tag: physical_specimen_location
attributes.value: University of Colorado AMC
attributes.tag: potassium_mg_usda
attributes.value: 3930.37
attributes.tag: probiotics_1wk
attributes.value: No
attributes.tag: protein_g_usda
attributes.value: 103.8
attributes.tag: race
attributes.value: Black/African American
attributes.tag: rai_frequency_new
attributes.value: not collected
attributes.tag: relationship_status_new
attributes.value: not collected
attributes.tag: retinol_mcg_usda
attributes.value: 414.73
attributes.tag: riboflavin_vitamin_b2_mg_usda
attributes.value: 3.09
attributes.tag: saa_ng_ml
attributes.value: 2583.60139
attributes.tag: sample name
attributes.value: qiita_sid_13338:13338.St.chronic.GLD019.T
attributes.tag: sample type
attributes.value: stool
attributes.tag: scd14_pg_ml
attributes.value: 1378268.59
attributes.tag: scd163_ng_ml
attributes.value: 390.5836181
attributes.tag: selenium_mcg_usda
attributes.value: 146.25
attributes.tag: sfa_10_0_decanoic_acid_g_usda
attributes.value: 0.69
attributes.tag: sfa_12_0_dodecanoic_acid_g_usda
attributes.value: 2.77
attributes.tag: sfa_14_0_tetradecanoic_acid_g_usda
attributes.value: 3.43
attributes.tag: sfa_16_0_hexadecanoic_acid_g_usda
attributes.value: 19.23
attributes.tag: sfa_18_0_octadecanoic_acid_g_usda
attributes.value: 10.09
attributes.tag: sfa_4_0_butanoic_acid_g_usda
attributes.value: 0.76
attributes.tag: sfa_6_0_hexanoic_acid_g_usda
attributes.value: 0.36
attributes.tag: sfa_8_0_octanoic_acid_g_usda
attributes.value: 0.44
attributes.tag: sodium_mg_usda
attributes.value: 4305.08
attributes.tag: statins_1mo
attributes.value: No
attributes.tag: thiamin_vitamin_b1_mg_usda
attributes.value: 1.92
attributes.tag: three_male_mtf_partners_anal_intercourse_6mo_new
attributes.value: not collected
attributes.tag: tnf_alpha_pg_ml
attributes.value: 696.364806
attributes.tag: tnf_beta_pg_ml
attributes.value: 0.124934134
attributes.tag: total_fat_g_usda
attributes.value: 119.42
attributes.tag: total_folate_mcg_usda
attributes.value: 479.52
attributes.tag: total_monounsaturated_fatty_acids_g_usda
attributes.value: 44.7
attributes.tag: total_polyunsaturated_fatty_acids_g_usda
attributes.value: 24.17
attributes.tag: total_saturated_fatty_acids_g_usda
attributes.value: 39.08
attributes.tag: total_sugars_g_usda
attributes.value: 247.45
attributes.tag: triglycerides
attributes.value: 78
attributes.tag: unprotexted_anal_intercourse_male_mtf_6mo_new
attributes.value: not collected
attributes.tag: urgent_defection_new
attributes.value: 1
attributes.tag: vcam_1_ng_ml
attributes.value: 282.3870872
attributes.tag: vegf_pg_ml
attributes.value: 251.0199255
attributes.tag: viral load
attributes.value: 20
attributes.tag: vitamin_a_rae_mcg_usda
attributes.value: 546.99
attributes.tag: vitamin_b12_mcg_usda
attributes.value: 6.61
attributes.tag: vitamin_b6_mg_usda
attributes.value: 2.05
attributes.tag: vitamin_c_mg_usda
attributes.value: 108.31
attributes.tag: vitamin_e_as_alpha_tocopherol_mg_usda
attributes.value: 11.14
attributes.tag: vitamin_k_mcg_usda
attributes.value: 110.1
attributes.tag: watery_diarrhea_24hr_new
attributes.value: NO
attributes.tag: zinc_mg_usda
attributes.value: 14.06