attributes.tag: ENA first public
attributes.value: 2021-05-26
attributes.tag: ENA last update
attributes.value: 2021-05-26
attributes.tag: External Id
attributes.value: SAMEA8800962
attributes.tag: INSDC center alias
attributes.value: MARINE BIOLOGICAL LABORATORY
attributes.tag: INSDC center name
attributes.value: MARINE BIOLOGICAL LABORATORY
attributes.tag: INSDC first public
attributes.value: 2021-05-26T09:21:16Z
attributes.tag: INSDC last update
attributes.value: 2021-05-26T09:21:16Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: SCGC AD-155-K20
attributes.tag: WGA amplification approach
attributes.value: mda based
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: IDBA-UD v.1.1.2, SPAdes 3.10.0, CLC Genomics Workbench v. 7, and A5. Contigs from all four assemblers were combined, compared for redundancy, and integrated into a new assembly using the Contig Integrator for Sequence Assembly of bacterial genomes (CISA).
attributes.tag: collection date
attributes.value: 2012-01-19
attributes.tag: completeness score
attributes.value: 16.01
attributes.tag: completeness software
attributes.value: CheckM
attributes.tag: contamination score
attributes.value: 2.26
attributes.tag: environment (biome)
attributes.value: marine hydrothermal vent biome [ENVO:01000030]
attributes.tag: environment (feature)
attributes.value: hydrothermal vent [ENVO:00000215]
attributes.tag: environment (material)
attributes.value: hydrothermal fluid [ENVO:01000134]
attributes.tag: geographic location (country and/or sea)
attributes.value: Cayman Islands
attributes.tag: geographic location (depth)
attributes.value: 2308
attributes.tag: geographic location (latitude)
attributes.value: 18.3769 N
attributes.tag: geographic location (longitude)
attributes.value: 81.7979 W
attributes.tag: investigation type
attributes.value: single amplified genome
attributes.tag: isolation source
attributes.value: deep sea hydrothermal vent
attributes.tag: metagenomic source
attributes.value: Methanothermococcus
attributes.tag: project name
attributes.value: Methanothermococcus SAGs from the Mid-Cayman Rise
attributes.tag: sample derived from
attributes.value: ERS1370013
attributes.tag: sample name
attributes.value: SCGC AD-155-K20
attributes.tag: sequencing method
attributes.value: Illumina NextSeq
attributes.tag: single cell or viral particle lysis approach
attributes.value: combination
attributes.tag: sorting technology
attributes.value: flow cytometric cell sorting
attributes.tag: taxonomic identity marker
attributes.value: 16S rRNA