description: Metagenome-assembled genome of a Methylococcaceae bacterium classified as a Methyloglobulus sp. by UBCG2. Recovered from a co-assembly of 5 environmental biofilms.
attributes.tag: ENA first public
attributes.value: 2021-07-08
attributes.tag: ENA last update
attributes.value: 2021-07-08
attributes.tag: External Id
attributes.value: SAMEA8962004
attributes.tag: INSDC center alias
attributes.value: RADBOUD UNIVERSITY, Department Microbiology
attributes.tag: INSDC center name
attributes.value: RADBOUD UNIVERSITY, Department Microbiology
attributes.tag: INSDC first public
attributes.value: 2021-07-08T16:18:01Z
attributes.tag: INSDC last update
attributes.value: 2021-07-08T16:18:01Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: Amsterdam_MAG
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: MEGAHIT;1.2.9;kmer set 21,29,39,59,79,99,119;default
attributes.tag: binning parameters
attributes.value: default parameters
attributes.tag: binning software
attributes.value: maxbin, metabat, concoct, binsanity and das_tool
attributes.tag: collection date
attributes.value: 2019-07-02
attributes.tag: completeness score
attributes.value: 84
attributes.tag: completeness software
attributes.value: checkm
attributes.tag: contamination score
attributes.value: 6.6
attributes.tag: environment (biome)
attributes.value: urban waterway
attributes.tag: environment (feature)
attributes.value: city centre canal
attributes.tag: environment (material)
attributes.value: biofilm
attributes.tag: geographic location (country and/or sea)
attributes.value: Netherlands
attributes.tag: geographic location (latitude)
attributes.value: 52.37
attributes.tag: geographic location (longitude)
attributes.value: 4.89
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation source
attributes.value: Canal wall biofilm
attributes.tag: metagenomic source
attributes.value: biofilm metagenome
attributes.tag: project name
attributes.value: PRJEB40426
attributes.tag: sample derived from
attributes.value: ERS6638746-ERS6638750
attributes.tag: sample name
attributes.value: Amsterdam_MAG
attributes.tag: sequencing method
attributes.value: Illumina NovaSeq 6000
attributes.tag: taxonomic identity marker
attributes.value: UBCG2 marker gene set