title: Metagenome-assembled genome: SRR948829_concoct_67
organism: uncultured Cytophagales bacterium
attributes.tag: assembly software
attributes.value: metaspades_v3.14.1
attributes.tag: binning software
attributes.value: MGnify-genomes-generation-pipeline_v1.0.0
attributes.tag: organism
attributes.value: uncultured Cytophagales bacterium
attributes.tag: broad-scale environmental context
attributes.value: coast
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: collection date
attributes.value: 2010-07-01
attributes.tag: sample derived from
attributes.value: SAMN02303579
attributes.tag: geographic location (longitude)
attributes.value: -70.639233
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach
attributes.tag: binning parameters
attributes.value: default
attributes.tag: completeness score
attributes.value: 97.39
attributes.tag: contamination score
attributes.value: 0.16
attributes.tag: environmental medium
attributes.value: berries
attributes.tag: geographic location (latitude)
attributes.value: 41.575836
attributes.tag: scientific_name
attributes.value: uncultured Cytophagales bacterium
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: local environmental context
attributes.value: mat
attributes.tag: metagenomic source
attributes.value: microbial mat metagenome
attributes.tag: project name
attributes.value: Microbial consortia modulate biogeochemical cycles over short spatiotemporal scales that often elude detection by traditional analytical approaches. We investigate syntrophic sulfur cycling in the 'pink berry' consortia through an integrative, multidisciplinary study at the microbial scale. The pink berries are macroscopic, photosynthetic microbial aggregates composed primarily of two closely associated species: sulfide-oxidizing purple sulfur bacteria (PSB) of the family Chromatiaceae and sulfate reducing bacteria (SRB) from the Desulfobulbacaea. Metagenomic sequencing and the reconstruction of near-complete genomes for the PSB and SRB species reveals the genetic potential for sulfur cycling within the berries. <p> Macroscopic microbial aggregates from the Sippewissett salt marsh, dominated by anoxygenic phototrophs (purple sulfur bacteria) and sulfate reducing bacteria.
attributes.tag: sequencing method
attributes.value: Illumina MiSeq
attributes.tag: completeness software
attributes.value: CheckM2_v1.0.1
attributes.tag: geographic location (country and/or sea)
attributes.value: USA
attributes.tag: isolation_source
attributes.value: microbial mat metagenome