organism: wastewater metagenome
attributes.tag: collection_date
attributes.value: 2022-11-10
attributes.tag: geo_loc_name
attributes.value: USA: New Mexico
attributes.tag: isolation_source
attributes.value: wastewater
attributes.tag: ww_sample_duration
attributes.value: 0
attributes.tag: ww_sample_matrix
attributes.value: raw wastewater
attributes.tag: ww_sample_type
attributes.value: grab
attributes.tag: ww_surv_target_1
attributes.value: SARS-CoV-2
attributes.tag: ww_surv_target_1_known_present
attributes.value: yes
attributes.tag: collected_by
attributes.value: New Mexico State University - Las Cruces
attributes.tag: purpose_of_ww_sampling
attributes.value: public health surveillance community-level
attributes.tag: ww_temperature
attributes.value: 20
attributes.tag: purpose_of_ww_sequencing
attributes.value: Community Surveillance for SARS-CoV-2 Variants
attributes.tag: sequenced_by
attributes.value: New Mexico State University - Las Cruces
attributes.tag: ww_endog_control_1
attributes.value: Human RNase P
attributes.tag: ww_endog_control_1_conc
attributes.value: 26.85
attributes.tag: ww_endog_control_1_units
attributes.value: cycles (Ct value)
attributes.tag: ww_surv_target_1_gene
attributes.value: N gene (N1)
attributes.tag: ww_surv_target_1_protocol
attributes.value: RTqPCR of SARS-CoV-2 on ABI 7500 Fast Using Promega GoTaq 1-Step RT-qPCR System
attributes.tag: ww_surv_target_2
attributes.value: SARS-CoV-2
attributes.tag: ww_surv_target_2_conc_unit
attributes.value: cycles (Ct value)
attributes.tag: ww_surv_target_2_gene
attributes.value: N gene (N2)
attributes.tag: ww_surv_target_2_known_present
attributes.value: yes
attributes.tag: extraction_method
attributes.value: Qiagen rneasy powerwater kit
attributes.tag: ww_surv_target_1_conc
attributes.value: 32.41
attributes.tag: ww_surv_target_1_conc_unit
attributes.value: cycles (Ct value)
attributes.tag: ww_surv_jurisdiction
attributes.value: NM
attributes.tag: ww_pre_treatment
attributes.value: filtered and centrifuged to remove large particles before concentration
attributes.tag: ww_population
attributes.value: 600
attributes.tag: ww_sample_site
attributes.value: college or university
attributes.tag: collection_site_id
attributes.value: NMSU_WWPN
attributes.tag: concentration_method
attributes.value: membrane filtration with acidification and mgcl2
attributes.tag: project_name
attributes.value: GenomeTrakr; LFFM ww project
attributes.tag: ww_flow
attributes.value: Not Collected
attributes.tag: extraction_control
attributes.value: NA
attributes.tag: collection_volume
attributes.value: 200 ml
attributes.tag: ww_surv_target_2_conc
attributes.value: 34.43
attributes.tag: ww_population_source
attributes.value: dorm capacity
attributes.tag: ww_endog_control_1_protocol
attributes.value: Not applicable
attributes.tag: BioSampleModel
attributes.value: SARS-CoV-2: wastewater surveillance