organism: uncultured Candidatus Saccharibacteria bacterium
description: This sample represents a Third Party Annotation (TPA) metagenome-assembled genome assembled from the metagenomic run SRR23388443 of study SRP421773.
attributes.tag: INSDC center name
attributes.value: EMG
attributes.tag: Submitter Id
attributes.value: SRR23388443_bin.31_MetaWRAP_v1.3_MAG
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaspades v3.15.3
attributes.tag: binning parameters
attributes.value: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.
attributes.tag: binning software
attributes.value: MetaWRAP v1.3
attributes.tag: broad-scale environmental context
attributes.value: human digestive system
attributes.tag: broker name
attributes.value: EBI-EMG
attributes.tag: collection date
attributes.value: 2022
attributes.tag: completeness score
attributes.value: 62.96
attributes.tag: completeness software
attributes.value: CheckM
attributes.tag: contamination score
attributes.value: 1.71
attributes.tag: environmental medium
attributes.value: subgingival plaque
attributes.tag: geographic location (country and/or sea)
attributes.value: Hong Kong
attributes.tag: geographic location (latitude)
attributes.value: 22.3193
attributes.tag: geographic location (longitude)
attributes.value: 114.1694
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: oral metagenome
attributes.tag: local environmental context
attributes.value: oral cavity
attributes.tag: metagenomic source
attributes.value: oral metagenome
attributes.tag: project name
attributes.value: Systematic Analysis of Site-Specific Biosynthetic Gene Clusters (BGCs) of Oral Microbiome in Periodontitis
attributes.tag: sample derived from
attributes.value: SAMN33196942
attributes.tag: sample name
attributes.value: SRR23388443_bin.31_MetaWRAP_v1.3_MAG
attributes.tag: scientific_name
attributes.value: uncultured Candidatus Saccharibacteria bacterium
attributes.tag: sequencing method
attributes.value: Illumina NovaSeq 6000
attributes.tag: taxonomic classification
attributes.value: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Candidatus Saccharibacteria;c__;o__;f__;g__;s__
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach