organism: Cyclobacteriaceae bacterium
attributes.tag: 16S recovered
attributes.value: Yes
attributes.tag: 16S recovery software
attributes.value: PROKKA (version 1.14.5)
attributes.tag: ENA first public
attributes.value: 2024-01-18
attributes.tag: GAL
attributes.value: University of Derby
attributes.tag: GAL_sample_id
attributes.value: NOT PROVIDED
attributes.tag: INSDC center name
attributes.value: Tree of Life Programme
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: Minimap2 (version 2.24-r1122)
attributes.tag: Submitter Id
attributes.value: e640f11d-ed88-477f-b611-337393e06310
attributes.tag: assembly quality
attributes.value: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
attributes.tag: assembly software
attributes.value: metaMDBG
attributes.tag: binning parameters
attributes.value: coverage; graph
attributes.tag: binning software
attributes.value: MetaBat (version 2.15-15-gd6ea400); DASTOOL (version 1.1.5)
attributes.tag: broad-scale environmental context
attributes.value: aquatic biome
attributes.tag: collected by
attributes.value: ALJADA | ALVAREZ-ROA
attributes.tag: collecting institution
attributes.value: Australian Institute of Marine Science
attributes.tag: collection date
attributes.value: 2020-12-10
attributes.tag: completeness score
attributes.value: 99.11
attributes.tag: completeness software
attributes.value: checkM (version 1.2.1); checkM_DB (release 2015-01-16)
attributes.tag: contamination score
attributes.value: 1.55
attributes.tag: environmental medium
attributes.value: dinoflagellate culture
attributes.tag: geographic location (country and/or sea)
attributes.value: USA
attributes.tag: geographic location (latitude)
attributes.value: not collected
attributes.tag: geographic location (longitude)
attributes.value: not collected
attributes.tag: geographic location (region and locality)
attributes.value: University Park, PA | Pennsylvania State University
attributes.tag: host life stage
attributes.value: vegetative cell
attributes.tag: host scientific name
attributes.value: Gerakladium sp. JEP-2021
attributes.tag: host taxid
attributes.value: 2813772
attributes.tag: identified by
attributes.value: JOHN PARKINSON
attributes.tag: identifier_affiliation
attributes.value: UNIVERSITY OF SOUTH FLORIDA
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: Dinoflagellate: Gerakladium sp. JEP-2021
attributes.tag: local environmental context
attributes.value: marine coral reef biome
attributes.tag: metagenomic source
attributes.value: dinoflagellate metagenome
attributes.tag: number of standard tRNAs extracted
attributes.value: 43
attributes.tag: organism part
attributes.value: WHOLE ORGANISM
attributes.tag: project name
attributes.value: ASG
attributes.tag: sample derived from
attributes.value: SAMEA115112818
attributes.tag: sample name
attributes.value: e640f11d-ed88-477f-b611-337393e06310
attributes.tag: scientific_name
attributes.value: Cyclobacteriaceae bacterium
attributes.tag: sequencing method
attributes.value: Pacbio Sequel II
attributes.tag: specimen id
attributes.value: UDUK0000095
attributes.tag: specimen voucher
attributes.value: NOT PROVIDED
attributes.tag: tRNA extraction software
attributes.value: PROKKA (version 1.14.5)
attributes.tag: taxonomic classification
attributes.value: GTDB-TK (version 2.3.2); GTDB (release 214)
attributes.tag: taxonomic identity marker
attributes.value: taxonomic classification defined by topology and ANI
attributes.tag: tolid
attributes.value: pyGerJepo1.Cyclobacteriaceae_1