organism: Paracoccaceae bacterium
attributes.tag: assembly software
attributes.value: metaMDBG
attributes.tag: habitat
attributes.value: semi-dark cave
attributes.tag: host scientific name
attributes.value: Spongia officinalis
attributes.tag: sample derived from
attributes.value: SAMEA115461022
attributes.tag: geographic location (longitude)
attributes.value: 5.60
attributes.tag: number of standard tRNAs extracted
attributes.value: 43
attributes.tag: host sex
attributes.value: not applicable
attributes.tag: specimen_id
attributes.value: GHC0000180
attributes.tag: identified_by
attributes.value: THIERRY PEREZ
attributes.tag: completeness software
attributes.value: checkM (version 1.2.1); checkM_DB (release 2015-01-16)
attributes.tag: binning software
attributes.value: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); MaxBin (version 2.7)
attributes.tag: organism
attributes.value: Paracoccaceae bacterium
attributes.tag: host taxid
attributes.value: 252964
attributes.tag: scientific_name
attributes.value: Paracoccaceae bacterium
attributes.tag: geographic location (region and locality)
attributes.value: La Ciotat
attributes.tag: host life stage
attributes.value: adult
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: GAL
attributes.value: Geomar Helmholtz Centre
attributes.tag: MAG coverage software
attributes.value: Minimap2 (version 2.24-r1122)
attributes.tag: metagenomic source
attributes.value: sponge metagenome
attributes.tag: project name
attributes.value: ASG
attributes.tag: sequencing method
attributes.value: Pacbio Sequel II
attributes.tag: 16s recovered
attributes.value: Yes
attributes.tag: tolid
attributes.value: odSpoOffi1.Paracoccaceae_1
attributes.tag: broad-scale environmental context
attributes.value: aquatic biome
attributes.tag: collection date
attributes.value: 2021-03-23
attributes.tag: binning parameters
attributes.value: coverage; graph
attributes.tag: contamination score
attributes.value: 1.6
attributes.tag: collected_by
attributes.value: THIERRY PEREZ
attributes.tag: tRNA extraction software
attributes.value: PROKKA (version 1.14.5)
attributes.tag: taxonomic classification
attributes.value: GTDB-TK (version 2.3.2); GTDB (release 214)
attributes.tag: 16S recovery software
attributes.value: PROKKA (version 1.14.5)
attributes.tag: relationship
attributes.value: Heterotrophic Microbiome (Mostly)
attributes.tag: geographic location (country and/or sea)
attributes.value: France
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: taxonomic identity marker
attributes.value: ani_screen
attributes.tag: completeness score
attributes.value: 88.51
attributes.tag: environmental medium
attributes.value: adult sponge tissue
attributes.tag: geographic location (latitude)
attributes.value: 43.16
attributes.tag: common name
attributes.value: commercial sponge
attributes.tag: organism part
attributes.value: WHOLE ORGANISM
attributes.tag: GAL_sample_id
attributes.value: NOT PROVIDED
attributes.tag: identifier_affiliation
attributes.value: CNRS
attributes.tag: specimen_voucher
attributes.value: NOT PROVIDED
attributes.tag: local environmental context
attributes.value: marine benthic biome
attributes.tag: depth
attributes.value: 10-15
attributes.tag: collecting institution
attributes.value: CNRS
attributes.tag: isolation_source
attributes.value: Sponge: Spongia officinalis