title: 5feec38b-5f82-4ed8-8052-780a91722f7f-asg-MAGScoT_cleanbin_000002
organism: Roseovarius sp.
attributes.tag: 16S recovered
attributes.value: Yes
attributes.tag: 16S recovery software
attributes.value: PROKKA (version 1.14.5)
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2023-11-23T09:47:58Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2023-11-23T09:47:58Z
attributes.tag: External Id
attributes.value: SAMEA114705372
attributes.tag: GAL
attributes.value: Dalhousie University
attributes.tag: GAL_sample_id
attributes.value: NOT PROVIDED
attributes.tag: INSDC center name
attributes.value: Tree of Life Programme
attributes.tag: INSDC first public
attributes.value: 2023-11-23T09:47:58Z
attributes.tag: INSDC last update
attributes.value: 2023-11-23T09:47:58Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: Minimap2 (version 2.24-r1122)
attributes.tag: Submitter Id
attributes.value: 5feec38b-5f82-4ed8-8052-780a91722f7f
attributes.tag: assembly quality
attributes.value: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
attributes.tag: assembly software
attributes.value: metaMDBG
attributes.tag: barcoding center
attributes.value: DALHOUSIE UNIVERSITY
attributes.tag: binning parameters
attributes.value: coverage; graph; hic-mapping
attributes.tag: binning software
attributes.value: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR
attributes.tag: broad-scale environmental context
attributes.value: aquatic biome
attributes.tag: collected by
attributes.value: CHRISTOPHER SCHVARCZ
attributes.tag: collecting institution
attributes.value: UNIVERSITY OF HAWAII AT MANOA
attributes.tag: collection date
attributes.value: 2021-05-12
attributes.tag: completeness score
attributes.value: 97.77
attributes.tag: completeness software
attributes.value: checkM (version 1.2.1); checkM_DB (release 2015-01-16)
attributes.tag: contamination score
attributes.value: 0.9
attributes.tag: environmental medium
attributes.value: adult diatom tissue
attributes.tag: geographic location (country and/or sea)
attributes.value: USA
attributes.tag: geographic location (latitude)
attributes.value: 21.30
attributes.tag: geographic location (longitude)
attributes.value: -157.81
attributes.tag: geographic location (region and locality)
attributes.value: Honolulu | Center for Microbial Oceanography: Research and Education
attributes.tag: habitat
attributes.value: laboratory
attributes.tag: host scientific name
attributes.value: Epithemia sp. CRS-2021b
attributes.tag: host taxid
attributes.value: 2809013
attributes.tag: identified by
attributes.value: CHRISTOPHER SCHVARCZ | ROSALINA STANCHEVA | GRIEG STEWARD
attributes.tag: identifier_affiliation
attributes.value: UNIVERSITY OF HAWAII AT MANOA | CALIFORNIA STATE UNIVERSITY SAN MARCOS | UNIVERSITY OF HAWAII AT MANOA
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: Diatom: Epithemia sp. CRS-2021b
attributes.tag: local environmental context
attributes.value: marine biome
attributes.tag: metagenomic source
attributes.value: algae metagenome
attributes.tag: number of standard tRNAs extracted
attributes.value: 43
attributes.tag: organism part
attributes.value: WHOLE ORGANISM
attributes.tag: original collection date
attributes.value: 2019-02-21
attributes.tag: original collection location
attributes.value: North Pacific Ocean | Station ALOHA | 22.75 N 158 W | 25 m depth
attributes.tag: project name
attributes.value: ASG
attributes.tag: sample derived from
attributes.value: SAMEA114705364
attributes.tag: sample name
attributes.value: 5feec38b-5f82-4ed8-8052-780a91722f7f
attributes.tag: scientific_name
attributes.value: Roseovarius sp.
attributes.tag: sequencing method
attributes.value: Pacbio Sequel II
attributes.tag: specimen id
attributes.value: DU0000022
attributes.tag: specimen voucher
attributes.value: NOT PROVIDED
attributes.tag: tRNA extraction software
attributes.value: PROKKA (version 1.14.5)
attributes.tag: taxonomic classification
attributes.value: GTDB-TK (version 2.3.2); GTDB (release 214)
attributes.tag: taxonomic identity marker
attributes.value: taxonomic classification defined by topology and ANI
attributes.tag: tolid
attributes.value: uoEpiScrs1.Roseovarius_sp_1