organism: Severe acute respiratory syndrome coronavirus 2
attributes.tag: collected_by
attributes.value: Sanford Health
attributes.tag: collection_date
attributes.value: 2024-01-23
attributes.tag: geo_loc_name
attributes.value: USA: South Dakota
attributes.tag: host
attributes.value: Homo sapiens
attributes.tag: host_disease
attributes.value: COVID-19 [MONDO:0100096]
attributes.tag: isolate
attributes.value: SARS-CoV-2/human/USA/SMGL_COVSeq_2697/2024
attributes.tag: isolation_source
attributes.value: clinical
attributes.tag: collection_device
attributes.value: Virus Transport Medium [OBI:0002866]
attributes.tag: collection_method
attributes.value: Swabbing [GENEPIO:0002117]
attributes.tag: purpose_of_sampling
attributes.value: Diagnostic Testing [GENEPIO:0100002]
attributes.tag: host_age
attributes.value: 1.3555555555555556
attributes.tag: host_sex
attributes.value: male
attributes.tag: sars_cov_2_diag_gene_name_1
attributes.value: N (orf9)
attributes.tag: sars_cov_2_diag_pcr_ct_value_1
attributes.value: 36.137
attributes.tag: sars_cov_2_diag_gene_name_2
attributes.value: ORF1ab (rep)
attributes.tag: sars_cov_2_diag_pcr_ct_value_2
attributes.value: 33.785
attributes.tag: purpose_of_sequencing
attributes.value: Baseline surveillance (random sampling) [GENEPIO:0100005]
attributes.tag: purpose_of_sequencing_details
attributes.value: Determining early introductions and spread
attributes.tag: sequenced_by
attributes.value: Sanford Medical Genetics Laboratory
attributes.tag: BioSampleModel
attributes.value: SARS-CoV-2: clinical or host-associated