organism: Severe acute respiratory syndrome coronavirus 2
attributes.tag: collected_by
attributes.value: Instituto Mexicano del Seguro Social
attributes.tag: collection_date
attributes.value: 2021-06-05
attributes.tag: geo_loc_name
attributes.value: Mexico: Oaxaca
attributes.tag: host
attributes.value: Homo sapiens
attributes.tag: host_disease
attributes.value: COVID-19
attributes.tag: isolate
attributes.value: Swab
attributes.tag: isolation_source
attributes.value: Nasopharyngeal and oropharyngeal swab
attributes.tag: antiviral_treatment_agent
attributes.value: not collected
attributes.tag: collection_device
attributes.value: not collected
attributes.tag: collection_method
attributes.value: Nasopharyngeal and oropharyngeal swab
attributes.tag: date_of_prior_antiviral_treat
attributes.value: not collected
attributes.tag: date_of_prior_sars_cov_2_infection
attributes.value: not collected
attributes.tag: date_of_sars_cov_2_vaccination
attributes.value: not collected
attributes.tag: exposure_event
attributes.value: not collected
attributes.tag: geo_loc_exposure
attributes.value: not collected
attributes.tag: gisaid_accession
attributes.value: EPI_ISL_2801855
attributes.tag: gisaid_virus_name
attributes.value: hCoV-19/Mexico/OAX-IBT_IMSS_2003/2021
attributes.tag: host_age
attributes.value: 45
attributes.tag: host_anatomical_material
attributes.value: mucus
attributes.tag: host_anatomical_part
attributes.value: Nasopharynge and oropharynge
attributes.tag: host_body_product
attributes.value: mucus
attributes.tag: host_disease_outcome
attributes.value: not collected
attributes.tag: host_health_state
attributes.value: Ambulatory
attributes.tag: host_recent_travel_loc
attributes.value: not collected
attributes.tag: host_recent_travel_return_date
attributes.value: not collected
attributes.tag: host_sex
attributes.value: female
attributes.tag: host_specimen_voucher
attributes.value: not applicable
attributes.tag: host_subject_id
attributes.value: IMSS_4376
attributes.tag: lat_lon
attributes.value: not collected
attributes.tag: passage_method
attributes.value: not applicable
attributes.tag: passage_number
attributes.value: not applicable
attributes.tag: prior_sars_cov_2_antiviral_treat
attributes.value: not collected
attributes.tag: prior_sars_cov_2_infection
attributes.value: not collected
attributes.tag: prior_sars_cov_2_vaccination
attributes.value: not collected
attributes.tag: purpose_of_sampling
attributes.value: Genomic surveillance
attributes.tag: purpose_of_sequencing
attributes.value: variant determination
attributes.tag: sars_cov_2_diag_gene_name_1
attributes.value: not collected
attributes.tag: sars_cov_2_diag_gene_name_2
attributes.value: not collected
attributes.tag: sars_cov_2_diag_pcr_ct_value_1
attributes.value: not collected
attributes.tag: sars_cov_2_diag_pcr_ct_value_2
attributes.value: not collected
attributes.tag: sequenced_by
attributes.value: Consorcio Mexicano de Vigilancia Genomica (CoViGen-Mex). Julio Elias Alvarado-Yaah, Carlos F. Arias, Santiago Avila-Rios, Victor Hugo Borja-Aburto, Celia Boukadida, Juan Bautista Chale-Dzul , Jose Antonio Enciso-Moreno, Gloria Elena Espinoza-Ayala, Fernando Fontove-Herrera, Concepcion Grajales-Muniz, Ricardo Grande, Alfredo Herrera-Estrella, Carla Ivon Herrera-Najera, Pavel Isa, Brenda Irasema Maldonado-Meza, Bernardo Martinez-Miguel, Margarita Matias-Florentino, Maria Guadalupe de Jesus Mireles-Rivera, Gloria Maria Molina-Salinas, Hector Montoya-Fuentes, Jose Esteban Munoz-Medina, Jose de Jesus Nunez-Contreras, Alicia Ocana-Mondragon, Luis Alberto Ochoa-Carrera, Hector Esteban Paz-Juarez, Francisco Pulido, Helen Haydee Fernanda Ramirez-Plascencia, Angel Gustavo Salas-Lais, Jorge Ivan Salinal-Nevarez, Alejandro Sanchez-Flores, Clara Esperanza Santacruz-Tinoco, Maria Guadalupe Santiago-Mauricio, Nelly Selem-Mojica, Blanca Taboada, Gloria Vazquez
attributes.tag: vaccine_received
attributes.value: not collected
attributes.tag: virus_isolate_of_prior_infection
attributes.value: not collected
attributes.tag: BioSampleModel
attributes.value: SARS-CoV-2: clinical or host-associated