organism: Ectocarpus siliculosus
attributes.tag: Alternative strain name
attributes.value: EcPH12-78m
attributes.tag: Culture conditions
attributes.value: Air-bubbled 10 L carboy cultures in Provasoli-enriched seawater with double strength Provasoli micronutrients. Grown under 16:8h white light and at 13C.
attributes.tag: DNA or RNA extracted
attributes.value: RNA
attributes.tag: DNA or RNA quality (ratio 260/280)
attributes.value: 2,05
attributes.tag: DNA or RNA sample code
attributes.value: RNA_SXS55
attributes.tag: ENA first public
attributes.value: 2024-01-10
attributes.tag: Extraction date
attributes.value: 21/04/17
attributes.tag: Extraction method
attributes.value: Qiagen RNeasy kit
attributes.tag: Harvest date
attributes.value: 06/04/17
attributes.tag: INSDC center name
attributes.value: Genoscope CEA
attributes.tag: INSDC status
attributes.value: public
attributes.tag: RNA RIN value
attributes.value: good profile
attributes.tag: Submitter Id
attributes.value: RNA_SXS55
attributes.tag: additional details
attributes.value: Original gametophyte isolated from the field. Independent isolate, not related to Ec863f. Publication: Couceiro et al. 2015 Evolution 69, 1808-1822. doi: 10.1111/evo.12702.
attributes.tag: collected_by
attributes.value: Akira F. Peters
attributes.tag: collection date
attributes.value: 2012-06-03
attributes.tag: culture_collection
attributes.value: RCC7086
attributes.tag: generation
attributes.value: partheno-sporophyte
attributes.tag: geographic location (country and/or sea)
attributes.value: France
attributes.tag: geographic location (latitude)
attributes.value: 48.7167
attributes.tag: geographic location (longitude)
attributes.value: -3.98333
attributes.tag: identification by
attributes.value: Akira F. Peters
attributes.tag: identification method
attributes.value: Morphology, genome sequenced
attributes.tag: ploidy
attributes.value: haploid
attributes.tag: ratio 260/230
attributes.value: 1,72
attributes.tag: sample alias
attributes.value: RNA_SXS55
attributes.tag: sample description
attributes.value: RNA extracted from Ectocarpus siliculosus strain Ec864m for RNA-seq-based genome annotation.
attributes.tag: sample name
attributes.value: RNA_SXS55
attributes.tag: sampling ecosystem
attributes.value: coastal
attributes.tag: sampling sea
attributes.value: English Channel
attributes.tag: sampling site
attributes.value: Perharidy, Brittany, France
attributes.tag: sampling water type
attributes.value: marine
attributes.tag: scientific_name
attributes.value: Ectocarpus siliculosus
attributes.tag: sequencing centre sample code
attributes.value: CBQ_AB
attributes.tag: sex
attributes.value: male
attributes.tag: sex determination method
attributes.value: genetic cross, genome sequencing
attributes.tag: strain
attributes.value: Ec864m
attributes.tag: tissue type
attributes.value: whole thallus