organism: uncultured Gammaproteobacteria bacterium
attributes.tag: ENA first public
attributes.value: 2024-02-06
attributes.tag: INSDC center name
attributes.value: EMG
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: ERR3589568_binner12_65
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaspades_v3.15.3
attributes.tag: binning parameters
attributes.value: default
attributes.tag: binning software
attributes.value: MGnify-genomes-generation-pipeline_v1.0.0
attributes.tag: broad-scale environmental context
attributes.value: water
attributes.tag: broker name
attributes.value: EBI-EMG
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 95.58
attributes.tag: completeness software
attributes.value: CheckM2_v1.0.1
attributes.tag: contamination score
attributes.value: 0.18
attributes.tag: environmental medium
attributes.value: tara
attributes.tag: geographic location (country and/or sea)
attributes.value: not provided
attributes.tag: geographic location (latitude)
attributes.value: 74.8023
attributes.tag: geographic location (longitude)
attributes.value: 76.1478
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: marine metagenome
attributes.tag: local environmental context
attributes.value: marine
attributes.tag: metagenomic source
attributes.value: marine metagenome
attributes.tag: project name
attributes.value: Analysis of the genes and genomes present in Tara Oceans Polar Circle prokaryote size fractions through shotgun DNA sequencing. Seawater was filtered from different depths to retain small cell sizes (Bacteria Organisms). The DNA was extracted and submitted to high throughput sequencing.
attributes.tag: sample derived from
attributes.value: SAMEA4397472
attributes.tag: sample name
attributes.value: ERR3589568_binner12_65
attributes.tag: scientific_name
attributes.value: uncultured Gammaproteobacteria bacterium
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach