organism: Candidatus Caccousia avicola
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2022-12-22
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2022-12-22
attributes.tag: External Id
attributes.value: SAMEA112268130
attributes.tag: INSDC center alias
attributes.value: UNIVERSITY OF COPENHAGEN
attributes.tag: INSDC center name
attributes.value: UNIVERSITY OF COPENHAGEN
attributes.tag: INSDC first public
attributes.value: 2022-12-22T20:22:14Z
attributes.tag: INSDC last update
attributes.value: 2022-12-22T20:22:14Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: ERR4303171_bin.63_MetaWRAP_v1.1_bin
attributes.tag: assembly software
attributes.value: unknown v0.0
attributes.tag: binning parameters
attributes.value: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.
attributes.tag: binning software
attributes.value: MetaWRAP v1.1
attributes.tag: broad-scale environmental context
attributes.value: Chicken digestive system
attributes.tag: broker name
attributes.value: EMG broker account, EMBL-EBI
attributes.tag: collection date
attributes.value: 2019-05-06
attributes.tag: completeness score
attributes.value: 62.08
attributes.tag: completeness software
attributes.value: CheckM
attributes.tag: contamination score
attributes.value: 2.01
attributes.tag: environmental medium
attributes.value: Caecum
attributes.tag: geographic location (country and/or sea)
attributes.value: Spain
attributes.tag: geographic location (latitude)
attributes.value: 41.170048
attributes.tag: geographic location (longitude)
attributes.value: 1.168491
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: chicken gut metagenome
attributes.tag: local environmental context
attributes.value: Digestive tube
attributes.tag: metagenomic source
attributes.value: chicken gut metagenome
attributes.tag: project name
attributes.value: HoloFood Chicken -- MAG Catalogue data
attributes.tag: sample derived from
attributes.value: SAMEA7025255
attributes.tag: sample name
attributes.value: ERR4303171_bin.63_MetaWRAP_v1.1_bin
attributes.tag: sequencing method
attributes.value: DNBSEQ-G400
attributes.tag: taxonomic classification
attributes.value: The taxonomy of this binned metagenome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Eubacteriales;f__Oscillospiraceae;g__Candidatus Caccousia;s__Candidatus Caccousia avicola
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach