organism: uncultured Acidaminococcus sp.
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2023-01-25
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2023-01-25
attributes.tag: External Id
attributes.value: SAMEA112353568
attributes.tag: INSDC center alias
attributes.value: EMG
attributes.tag: INSDC center name
attributes.value: EMG
attributes.tag: INSDC first public
attributes.value: 2023-01-25T12:23:02Z
attributes.tag: INSDC last update
attributes.value: 2023-01-25T12:23:02Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: SRR17622768_bin.94_metawrap_v1.3_MAG
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaSPAdes v3.15.3
attributes.tag: binning parameters
attributes.value: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.
attributes.tag: binning software
attributes.value: metawrap v1.3
attributes.tag: broad-scale environmental context
attributes.value: mouse digestive system
attributes.tag: broker name
attributes.value: EMG broker account, EMBL-EBI
attributes.tag: collection date
attributes.value: 2021-01-01
attributes.tag: completeness score
attributes.value: 98.8
attributes.tag: completeness software
attributes.value: CheckM
attributes.tag: contamination score
attributes.value: 0.4
attributes.tag: environmental medium
attributes.value: feces
attributes.tag: geographic location (country and/or sea)
attributes.value: Canada
attributes.tag: geographic location (latitude)
attributes.value: 45.50169
attributes.tag: geographic location (longitude)
attributes.value: -73.56725
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: mouse gut metagenome
attributes.tag: local environmental context
attributes.value: digestive tube
attributes.tag: metagenomic source
attributes.value: mouse gut metagenome
attributes.tag: project name
attributes.value: Castalagin polyphenol potentiates anti-PD-1 efficacy through a shift in the microbiome composition, reprogramming the tumor microenvironment
attributes.tag: sample derived from
attributes.value: SAMN24721980
attributes.tag: sample name
attributes.value: SRR17622768_bin.94_metawrap_v1.3_MAG
attributes.tag: sequencing method
attributes.value: Illumina NovaSeq 6000
attributes.tag: taxonomic classification
attributes.value: The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Negativicutes;o__Acidaminococcales;f__Acidaminococcaceae;g__Acidaminococcus;s__
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach