title: 8dc9b1eb-ab8f-4ba0-b921-3d1b8bb543ab-asg-MAGScoT_cleanbin_000018
organism: Steroidobacteraceae bacterium
attributes.tag: 16S recovered
attributes.value: Yes
attributes.tag: 16S recovery software
attributes.value: PROKKA (version 1.14.5)
attributes.tag: ENA first public
attributes.value: 2021-04-21
attributes.tag: ENA last update
attributes.value: 2021-04-21
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2023-11-28T17:45:05Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2023-11-28T17:45:05Z
attributes.tag: External Id
attributes.value: SAMEA114765697
attributes.tag: GAL
attributes.value: Royal Botanic Garden Edinburgh
attributes.tag: GAL_sample_id
attributes.value: NOT PROVIDED
attributes.tag: INSDC center alias
attributes.value: EarlhamInstitute
attributes.tag: INSDC center name
attributes.value: Tree of Life Programme
attributes.tag: INSDC first public
attributes.value: 2023-11-28T17:45:05Z
attributes.tag: INSDC last update
attributes.value: 2023-11-28T17:45:05Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: Minimap2 (version 2.24-r1122)
attributes.tag: Submitter Id
attributes.value: 8dc9b1eb-ab8f-4ba0-b921-3d1b8bb543ab
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaMDBG
attributes.tag: binning parameters
attributes.value: coverage; graph
attributes.tag: binning software
attributes.value: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); MaxBin (version 2.7)
attributes.tag: broad-scale environmental context
attributes.value: temperate biome
attributes.tag: broker name
attributes.value: Collaborative Open Plant Omics broker account, Earlham Institute, Norwich
attributes.tag: collected by
attributes.value: REBECCA YAHR
attributes.tag: collecting institution
attributes.value: ROYAL BOTANIC GARDEN EDINBURGH
attributes.tag: collection date
attributes.value: 2021-04-02
attributes.tag: completeness score
attributes.value: 57.01
attributes.tag: completeness software
attributes.value: checkM (version 1.2.1); checkM_DB (release 2015-01-16)
attributes.tag: contamination score
attributes.value: 1.82
attributes.tag: elevation
attributes.value: 80
attributes.tag: environmental medium
attributes.value: adult lichen tissue
attributes.tag: geographic location (country and/or sea)
attributes.value: United Kingdom
attributes.tag: geographic location (elevation)
attributes.value: 80
attributes.tag: geographic location (latitude)
attributes.value: 56.02
attributes.tag: geographic location (longitude)
attributes.value: -4.99
attributes.tag: geographic location (region and locality)
attributes.value: Argyllshire | Benmore Botanic Garden | Mixed conifer arboretum in mesic floodplain.
attributes.tag: habitat
attributes.value: Twigs of spruce at edge of glade in floodplain.
attributes.tag: host life stage
attributes.value: vegetative structure
attributes.tag: host scientific name
attributes.value: Platismatia glauca
attributes.tag: host sex
attributes.value: other
attributes.tag: host taxid
attributes.value: 78070
attributes.tag: identified by
attributes.value: REBECCA YAHR
attributes.tag: identifier_affiliation
attributes.value: ROYAL BOTANIC GARDEN EDINBURGH
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: Lichen: Platismatia glauca
attributes.tag: lifestage
attributes.value: vegetative structure
attributes.tag: local environmental context
attributes.value: temperate woodland biome
attributes.tag: metagenomic source
attributes.value: lichen metagenome
attributes.tag: number of standard tRNAs extracted
attributes.value: 26
attributes.tag: organism part
attributes.value: WHOLE ORGANISM
attributes.tag: project name
attributes.value: DTOL
attributes.tag: sample derived from
attributes.value: SAMEA114765683
attributes.tag: sample name
attributes.value: 8dc9b1eb-ab8f-4ba0-b921-3d1b8bb543ab
attributes.tag: scientific_name
attributes.value: Steroidobacteraceae bacterium
attributes.tag: sequencing method
attributes.value: Pacbio Sequel II
attributes.tag: sex
attributes.value: ASEXUAL MORPH
attributes.tag: specimen id
attributes.value: EDTOL00467
attributes.tag: specimen voucher
attributes.value: NOT PROVIDED
attributes.tag: tRNA extraction software
attributes.value: PROKKA (version 1.14.5)
attributes.tag: taxonomic classification
attributes.value: GTDB-TK (version 2.3.2); GTDB (release 214)
attributes.tag: taxonomic identity marker
attributes.value: ANI
attributes.tag: tolid
attributes.value: glPlaGlau9.Steroidobacteraceae_1