organism: Gammaproteobacteria bacterium
attributes.tag: 16S recovered
attributes.value: Yes
attributes.tag: 16S recovery software
attributes.value: PROKKA (version 1.14.5)
attributes.tag: GAL
attributes.value: Geomar Helmholtz Centre
attributes.tag: GAL_sample_id
attributes.value: NOT PROVIDED
attributes.tag: INSDC center name
attributes.value: Tree of Life Programme
attributes.tag: MAG coverage software
attributes.value: Minimap2 (version 2.24-r1122)
attributes.tag: Submitter Id
attributes.value: 04bf8a70-9503-43c2-bc76-39e540d8a97c
attributes.tag: assembly quality
attributes.value: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
attributes.tag: assembly software
attributes.value: metaMDBG
attributes.tag: binning parameters
attributes.value: coverage; graph; hic-mapping
attributes.tag: binning software
attributes.value: MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR
attributes.tag: broad-scale environmental context
attributes.value: aquatic biome
attributes.tag: collected by
attributes.value: RODRIGO COSTA
attributes.tag: collecting institution
attributes.value: UNIVERSITY OF LISBON AND CENTRE OF MARINE SCIENCES
attributes.tag: collection date
attributes.value: 2021-06-08
attributes.tag: common name
attributes.value: commercial sponge
attributes.tag: completeness score
attributes.value: 90.7
attributes.tag: completeness software
attributes.value: checkM (version 1.2.1); checkM_DB (release 2015-01-16)
attributes.tag: contamination score
attributes.value: 0.7
attributes.tag: depth
attributes.value: 16
attributes.tag: environmental medium
attributes.value: adult sponge tissue
attributes.tag: geographic location (country and/or sea)
attributes.value: Portugal
attributes.tag: geographic location (latitude)
attributes.value: 36.98
attributes.tag: geographic location (longitude)
attributes.value: 7.99
attributes.tag: geographic location (region and locality)
attributes.value: Pedra da Greta
attributes.tag: habitat
attributes.value: Coastal Seawater
attributes.tag: host life stage
attributes.value: adult
attributes.tag: host scientific name
attributes.value: Spongia officinalis
attributes.tag: host taxid
attributes.value: 252964
attributes.tag: identified by
attributes.value: JORGE GONÇALVES
attributes.tag: identifier_affiliation
attributes.value: CENTRE OF MARINE SCIENCES
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: Sponge: Spongia officinalis
attributes.tag: local environmental context
attributes.value: marine benthic biome
attributes.tag: metagenomic source
attributes.value: sponge metagenome
attributes.tag: number of standard tRNAs extracted
attributes.value: 38
attributes.tag: organism part
attributes.value: WHOLE ORGANISM
attributes.tag: project name
attributes.value: ASG
attributes.tag: relationship
attributes.value: Heterotrophic Microbiome (Mostly)
attributes.tag: sample derived from
attributes.value: SAMEA114406238
attributes.tag: sample name
attributes.value: 04bf8a70-9503-43c2-bc76-39e540d8a97c
attributes.tag: scientific_name
attributes.value: Gammaproteobacteria bacterium
attributes.tag: sequencing method
attributes.value: Pacbio Sequel II
attributes.tag: specimen id
attributes.value: GHC0000125
attributes.tag: specimen voucher
attributes.value: NOT PROVIDED
attributes.tag: tRNA extraction software
attributes.value: PROKKA (version 1.14.5)
attributes.tag: taxonomic classification
attributes.value: GTDB-TK (version 2.1.1); GTDB (release 207_v2)
attributes.tag: taxonomic identity marker
attributes.value: taxonomic classification defined by topology and ANI
attributes.tag: tolid
attributes.value: odSpoOffi2.Gammaproteobacteria_2