title: ERS11624237
organism: Paenacidovorax caeni
description: JJ-ZL85-90-7-m2-bin191 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2024-05-24T00:31:11Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2024-05-24T00:31:11Z
attributes.tag: External Id
attributes.value: SAMEA110047710
attributes.tag: INSDC center name
attributes.value: Biology Centre CAS
attributes.tag: INSDC first public
attributes.value: 2024-05-24T00:31:11Z
attributes.tag: INSDC last update
attributes.value: 2024-05-24T00:31:11Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: JJ-ZL85-90-7-m2-bin191
attributes.tag: assembly quality
attributes.value: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
attributes.tag: assembly software
attributes.value: MEGAHIT
attributes.tag: binning parameters
attributes.value: coverage and kmer
attributes.tag: binning software
attributes.value: MetaBAT2
attributes.tag: collection date
attributes.value: 2005-08-01
attributes.tag: completeness score
attributes.value: 98.18
attributes.tag: completeness software
attributes.value: checkm
attributes.tag: contamination score
attributes.value: 0.84
attributes.tag: environment (biome)
attributes.value: freshwater lake
attributes.tag: environment (feature)
attributes.value: lake
attributes.tag: environment (material)
attributes.value: fresh water
attributes.tag: geographic location (country and/or sea)
attributes.value: Czech Republic
attributes.tag: geographic location (latitude)
attributes.value: 50.08709255
attributes.tag: geographic location (longitude)
attributes.value: 13.1275044
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: Freshwater lake
attributes.tag: metagenomic source
attributes.value: freshwater metagenome
attributes.tag: project name
attributes.value: PRJEB49198
attributes.tag: sample derived from
attributes.value: ERS11624237
attributes.tag: sample name
attributes.value: JJ-ZL85-90-7-m2-bin191
attributes.tag: scientific_name
attributes.value: Acidovorax caeni
attributes.tag: sequencing method
attributes.value: Illumina NovaSeq 6000
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach