title: MsH-30jul19-203: freshwater MAG from Lake Most
organism: Candidatus Nanopelagicus sp.
description: Candidatus Nanopelagicus sp. assembled from Lake Most
attributes.tag: ENA-FIRST-PUBLIC
attributes.value: 2024-07-23T12:49:33Z
attributes.tag: ENA-LAST-UPDATE
attributes.value: 2024-07-23T12:49:33Z
attributes.tag: External Id
attributes.value: SAMEA115862028
attributes.tag: INSDC center name
attributes.value: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
attributes.tag: INSDC first public
attributes.value: 2024-07-23T12:49:33Z
attributes.tag: INSDC last update
attributes.value: 2024-07-23T12:49:33Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: MsH-30jul19-203
attributes.tag: assembly quality
attributes.value: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
attributes.tag: assembly software
attributes.value: Megahit
attributes.tag: binning parameters
attributes.value: coverage and kmer
attributes.tag: binning software
attributes.value: Metabat2
attributes.tag: broad-scale environmental context
attributes.value: freshwater biome
attributes.tag: collection date
attributes.value: 2019-07-30
attributes.tag: completeness score
attributes.value: 52.9
attributes.tag: completeness software
attributes.value: CheckM
attributes.tag: contamination score
attributes.value: 0
attributes.tag: environmental medium
attributes.value: artificial lake
attributes.tag: geographic location (country and/or sea)
attributes.value: Czechia
attributes.tag: geographic location (latitude)
attributes.value: 50.516667
attributes.tag: geographic location (longitude)
attributes.value: 13.616667
attributes.tag: isolation_source
attributes.value: freshwater lake
attributes.tag: local environmental context
attributes.value: freshwater lake biome
attributes.tag: metagenomic source
attributes.value: freshwater metagenome
attributes.tag: project name
attributes.value: PRJEB35640
attributes.tag: sample derived from
attributes.value: ERS4065090
attributes.tag: sample name
attributes.value: MsH-30jul19-203
attributes.tag: scientific_name
attributes.value: Candidatus Nanopelagicus sp.
attributes.tag: taxonomic identity marker
attributes.value: multi-marker