title: Plasma cell-free RNA, RNA seq gene counts for patient: GHL170_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Positive
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 41
attributes.tag: site
attributes.value: Kisenyi
attributes.tag: cad4tb_score
attributes.value: NA
attributes.tag: qxr_score
attributes.value: NA
attributes.tag: lunit_score
attributes.value: NA
attributes.tag: cohort
attributes.value: GHL
attributes.tag: extract_date
attributes.value: 11/22/2021
attributes.tag: volume
attributes.value: 1000
attributes.tag: library_prep_date
attributes.value: 11/23/2021
attributes.tag: bfcohort
attributes.value: ghl
attributes.tag: reads_all
attributes.value: 22824436
attributes.tag: reads_trimmed_filtered
attributes.value: 22808568
attributes.tag: align_input
attributes.value: 22773832
attributes.tag: align_unique
attributes.value: 5698997
attributes.tag: align_multi
attributes.value: 4912035
attributes.tag: align_tooshort
attributes.value: 11879703
attributes.tag: duplication_rate
attributes.value: 0.660636601268455
attributes.tag: ftcount
attributes.value: 918533
attributes.tag: bias53
attributes.value: 1.17
attributes.tag: intron_exon_ratio
attributes.value: 0.433559061453997
attributes.tag: exon_ratio
attributes.value: 0.472700524991161
attributes.tag: exonic_reads
attributes.value: 1446578
attributes.tag: intronic_reads
attributes.value: 627177
attributes.tag: intergenic_reads
attributes.value: 986487
attributes.tag: rrna_reads
attributes.value: 392713
attributes.tag: mtrna_reads
attributes.value: 41704
attributes.tag: nuclear_reads
attributes.value: 2272479
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.145078717468274
attributes.tag: tb
attributes.value: positive
attributes.tag: tb_binary
attributes.value: 1
attributes.tag: sample_group_granular
attributes.value: positive_GHL_HIVNegative
attributes.tag: semiquant
attributes.value: Low
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing