title: Plasma cell-free RNA, RNA seq gene counts for patient: GHL269_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Negative
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: female
attributes.tag: age
attributes.value: 39
attributes.tag: site
attributes.value: Mulago
attributes.tag: cad4tb_score
attributes.value: NA
attributes.tag: qxr_score
attributes.value: NA
attributes.tag: lunit_score
attributes.value: NA
attributes.tag: cohort
attributes.value: GHL
attributes.tag: extract_date
attributes.value: 1/11/2022
attributes.tag: volume
attributes.value: 1000
attributes.tag: library_prep_date
attributes.value: 1/12/2022
attributes.tag: bfcohort
attributes.value: ghl
attributes.tag: reads_all
attributes.value: 28462745
attributes.tag: reads_trimmed_filtered
attributes.value: 28408795
attributes.tag: align_input
attributes.value: 28294515
attributes.tag: align_unique
attributes.value: 6110040
attributes.tag: align_multi
attributes.value: 4290820
attributes.tag: align_tooshort
attributes.value: 17615428
attributes.tag: duplication_rate
attributes.value: 0.737870571463914
attributes.tag: ftcount
attributes.value: 314836
attributes.tag: bias53
attributes.value: 1.23
attributes.tag: intron_exon_ratio
attributes.value: 1.26280789359965
attributes.tag: exon_ratio
attributes.value: 0.2596850991538
attributes.tag: exonic_reads
attributes.value: 583156
attributes.tag: intronic_reads
attributes.value: 736414
attributes.tag: intergenic_reads
attributes.value: 926057.5
attributes.tag: rrna_reads
attributes.value: 333906
attributes.tag: mtrna_reads
attributes.value: 6635
attributes.tag: nuclear_reads
attributes.value: 1571797
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.174606162718097
attributes.tag: tb
attributes.value: negative
attributes.tag: tb_binary
attributes.value: 0
attributes.tag: sample_group_granular
attributes.value: negative_GHL_HIVNegative
attributes.tag: semiquant
attributes.value: Negative
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing