title: Plasma cell-free RNA, RNA seq gene counts for patient: TBSQUARE_613_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Negative
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 42
attributes.tag: site
attributes.value: Uganda
attributes.tag: cad4tb_score
attributes.value: 64.8300018310547
attributes.tag: qxr_score
attributes.value: 0.651000022888184
attributes.tag: lunit_score
attributes.value: 13.4499998092651
attributes.tag: cohort
attributes.value: TBSQUARE
attributes.tag: extract_date
attributes.value: 4/3/2023
attributes.tag: volume
attributes.value: 500
attributes.tag: library_prep_date
attributes.value: 4/4/2023
attributes.tag: bfcohort
attributes.value: tbs
attributes.tag: reads_all
attributes.value: 27373251
attributes.tag: reads_trimmed_filtered
attributes.value: 27333217
attributes.tag: align_input
attributes.value: 27188518
attributes.tag: align_unique
attributes.value: 11703043
attributes.tag: align_multi
attributes.value: 4434998
attributes.tag: align_tooshort
attributes.value: 10929983
attributes.tag: duplication_rate
attributes.value: 0.723327562438216
attributes.tag: ftcount
attributes.value: 1943667
attributes.tag: bias53
attributes.value: 1.17
attributes.tag: intron_exon_ratio
attributes.value: 0.119263152557096
attributes.tag: exon_ratio
attributes.value: 0.748781899057133
attributes.tag: exonic_reads
attributes.value: 2721486
attributes.tag: intronic_reads
attributes.value: 324573
attributes.tag: intergenic_reads
attributes.value: 588492
attributes.tag: rrna_reads
attributes.value: 460269
attributes.tag: mtrna_reads
attributes.value: 1046693
attributes.tag: nuclear_reads
attributes.value: 2038333
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.129825303677127
attributes.tag: tb
attributes.value: negative
attributes.tag: tb_binary
attributes.value: 0
attributes.tag: sample_group_granular
attributes.value: negative_TBSQUARE_HIVNegative
attributes.tag: semiquant
attributes.value: Negative
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing