title: Plasma cell-free RNA, RNA seq gene counts for patient: GHL114_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Positive
attributes.tag: hiv
attributes.value: Positive
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 38
attributes.tag: site
attributes.value: Kisenyi
attributes.tag: cad4tb_score
attributes.value: NA
attributes.tag: qxr_score
attributes.value: NA
attributes.tag: lunit_score
attributes.value: NA
attributes.tag: cohort
attributes.value: GHL
attributes.tag: extract_date
attributes.value: 11/18/2021
attributes.tag: volume
attributes.value: 1000
attributes.tag: library_prep_date
attributes.value: 11/19/2021
attributes.tag: bfcohort
attributes.value: ghl
attributes.tag: reads_all
attributes.value: 24041367
attributes.tag: reads_trimmed_filtered
attributes.value: 24025840
attributes.tag: align_input
attributes.value: 23990231
attributes.tag: align_unique
attributes.value: 10974536
attributes.tag: align_multi
attributes.value: 5280297
attributes.tag: align_tooshort
attributes.value: 7481102
attributes.tag: duplication_rate
attributes.value: 0.595215026501514
attributes.tag: ftcount
attributes.value: 2633125
attributes.tag: bias53
attributes.value: 1.16
attributes.tag: intron_exon_ratio
attributes.value: 0.193810500296153
attributes.tag: exon_ratio
attributes.value: 0.677722371245024
attributes.tag: exonic_reads
attributes.value: 3741304
attributes.tag: intronic_reads
attributes.value: 725104
attributes.tag: intergenic_reads
attributes.value: 1054000
attributes.tag: rrna_reads
attributes.value: 460988
attributes.tag: mtrna_reads
attributes.value: 120410
attributes.tag: nuclear_reads
attributes.value: 4410847
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.0923408206127704
attributes.tag: tb
attributes.value: positive
attributes.tag: tb_binary
attributes.value: 1
attributes.tag: sample_group_granular
attributes.value: positive_GHL_HIVPositive
attributes.tag: semiquant
attributes.value: High
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing