title: Plasma cell-free RNA, RNA seq gene counts for patient: TBSQUARE_608_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Negative
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: female
attributes.tag: age
attributes.value: 22
attributes.tag: site
attributes.value: Uganda
attributes.tag: cad4tb_score
attributes.value: 22.1599998474121
attributes.tag: qxr_score
attributes.value: 0.129999995231628
attributes.tag: lunit_score
attributes.value: 5.15000009536743
attributes.tag: cohort
attributes.value: TBSQUARE
attributes.tag: extract_date
attributes.value: 4/3/2023
attributes.tag: volume
attributes.value: 500
attributes.tag: library_prep_date
attributes.value: 4/4/2023
attributes.tag: bfcohort
attributes.value: tbs
attributes.tag: reads_all
attributes.value: 28956490
attributes.tag: reads_trimmed_filtered
attributes.value: 28936075
attributes.tag: align_input
attributes.value: 28864756
attributes.tag: align_unique
attributes.value: 4643427
attributes.tag: align_multi
attributes.value: 2653240
attributes.tag: align_tooshort
attributes.value: 21457282
attributes.tag: duplication_rate
attributes.value: 0.67047935548086
attributes.tag: ftcount
attributes.value: 710230
attributes.tag: bias53
attributes.value: 1.22
attributes.tag: intron_exon_ratio
attributes.value: 0.362657610886481
attributes.tag: exon_ratio
attributes.value: 0.517289447024829
attributes.tag: exonic_reads
attributes.value: 1023287.5
attributes.tag: intronic_reads
attributes.value: 371103
attributes.tag: intergenic_reads
attributes.value: 583781.5
attributes.tag: rrna_reads
attributes.value: 338787
attributes.tag: mtrna_reads
attributes.value: 454073
attributes.tag: nuclear_reads
attributes.value: 1019807
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.18689974496143
attributes.tag: tb
attributes.value: negative
attributes.tag: tb_binary
attributes.value: 0
attributes.tag: sample_group_granular
attributes.value: negative_TBSQUARE_HIVNegative
attributes.tag: semiquant
attributes.value: Negative
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing