title: Plasma cell-free RNA, RNA seq gene counts for patient: GHL188_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Negative
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: female
attributes.tag: age
attributes.value: 38
attributes.tag: site
attributes.value: Mulago
attributes.tag: cad4tb_score
attributes.value: NA
attributes.tag: qxr_score
attributes.value: NA
attributes.tag: lunit_score
attributes.value: NA
attributes.tag: cohort
attributes.value: GHL
attributes.tag: extract_date
attributes.value: 11/22/2021
attributes.tag: volume
attributes.value: 400
attributes.tag: library_prep_date
attributes.value: 11/23/2021
attributes.tag: bfcohort
attributes.value: ghl
attributes.tag: reads_all
attributes.value: 38168860
attributes.tag: reads_trimmed_filtered
attributes.value: 38134560
attributes.tag: align_input
attributes.value: 38040485
attributes.tag: align_unique
attributes.value: 3146533
attributes.tag: align_multi
attributes.value: 2239018
attributes.tag: align_tooshort
attributes.value: 32566372
attributes.tag: duplication_rate
attributes.value: 0.815480522543806
attributes.tag: ftcount
attributes.value: 186372
attributes.tag: bias53
attributes.value: 1.23
attributes.tag: intron_exon_ratio
attributes.value: 0.543164404148907
attributes.tag: exon_ratio
attributes.value: 0.423711573605584
attributes.tag: exonic_reads
attributes.value: 324712
attributes.tag: intronic_reads
attributes.value: 176372
attributes.tag: intergenic_reads
attributes.value: 265267.5
attributes.tag: rrna_reads
attributes.value: 120455
attributes.tag: mtrna_reads
attributes.value: 29263
attributes.tag: nuclear_reads
attributes.value: 517314
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.180583540219959
attributes.tag: tb
attributes.value: negative
attributes.tag: tb_binary
attributes.value: 0
attributes.tag: sample_group_granular
attributes.value: negative_GHL_HIVNegative
attributes.tag: semiquant
attributes.value: Negative
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing