title: Plasma cell-free RNA, RNA seq gene counts for patient: TBSQUARE_637_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Negative
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 25
attributes.tag: site
attributes.value: Uganda
attributes.tag: cad4tb_score
attributes.value: 44.8300018310547
attributes.tag: qxr_score
attributes.value: 0.324999988079071
attributes.tag: lunit_score
attributes.value: 2.58999991416931
attributes.tag: cohort
attributes.value: TBSQUARE
attributes.tag: extract_date
attributes.value: 4/7/2023
attributes.tag: volume
attributes.value: 500
attributes.tag: library_prep_date
attributes.value: 4/10/2023
attributes.tag: bfcohort
attributes.value: tbs
attributes.tag: reads_all
attributes.value: 34955881
attributes.tag: reads_trimmed_filtered
attributes.value: 34921609
attributes.tag: align_input
attributes.value: 34787073
attributes.tag: align_unique
attributes.value: 8634512
attributes.tag: align_multi
attributes.value: 3983576
attributes.tag: align_tooshort
attributes.value: 22016182
attributes.tag: duplication_rate
attributes.value: 0.497598888539362
attributes.tag: ftcount
attributes.value: 2636568
attributes.tag: bias53
attributes.value: 1.19
attributes.tag: intron_exon_ratio
attributes.value: 0.228187516402875
attributes.tag: exon_ratio
attributes.value: 0.654633076692614
attributes.tag: exonic_reads
attributes.value: 3555017
attributes.tag: intronic_reads
attributes.value: 811210.5
attributes.tag: intergenic_reads
attributes.value: 1064321.5
attributes.tag: rrna_reads
attributes.value: 621603
attributes.tag: mtrna_reads
attributes.value: 387433
attributes.tag: nuclear_reads
attributes.value: 3993956
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.124246251043376
attributes.tag: tb
attributes.value: negative
attributes.tag: tb_binary
attributes.value: 0
attributes.tag: sample_group_granular
attributes.value: negative_TBSQUARE_HIVNegative
attributes.tag: semiquant
attributes.value: Negative
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing