title: Plasma cell-free RNA, RNA seq gene counts for patient: TBSQUARE_708_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Positive
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 45
attributes.tag: site
attributes.value: Uganda
attributes.tag: cad4tb_score
attributes.value: 65.5899963378906
attributes.tag: qxr_score
attributes.value: 0.75
attributes.tag: lunit_score
attributes.value: 6.51000022888184
attributes.tag: cohort
attributes.value: TBSQUARE
attributes.tag: extract_date
attributes.value: 4/8/2023
attributes.tag: volume
attributes.value: 500
attributes.tag: library_prep_date
attributes.value: 4/10/2023
attributes.tag: bfcohort
attributes.value: tbs
attributes.tag: reads_all
attributes.value: 23056135
attributes.tag: reads_trimmed_filtered
attributes.value: 23044695
attributes.tag: align_input
attributes.value: 23008926
attributes.tag: align_unique
attributes.value: 13850322
attributes.tag: align_multi
attributes.value: 4563064
attributes.tag: align_tooshort
attributes.value: 4518563
attributes.tag: duplication_rate
attributes.value: 0.464518772830519
attributes.tag: ftcount
attributes.value: 6491925
attributes.tag: bias53
attributes.value: 1.11
attributes.tag: intron_exon_ratio
attributes.value: 0.0605440576607573
attributes.tag: exon_ratio
attributes.value: 0.879104090481965
attributes.tag: exonic_reads
attributes.value: 8761314
attributes.tag: intronic_reads
attributes.value: 530445.5
attributes.tag: intergenic_reads
attributes.value: 674425.5
attributes.tag: rrna_reads
attributes.value: 558876
attributes.tag: mtrna_reads
attributes.value: 2389313
attributes.tag: nuclear_reads
attributes.value: 6641104
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.0582812518086578
attributes.tag: tb
attributes.value: positive
attributes.tag: tb_binary
attributes.value: 1
attributes.tag: sample_group_granular
attributes.value: positive_TBSQUARE_HIVNegative
attributes.tag: semiquant
attributes.value: Low
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing