title: Plasma cell-free RNA, RNA seq gene counts for patient: TBSQUARE_623_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Positive
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: female
attributes.tag: age
attributes.value: 26
attributes.tag: site
attributes.value: Uganda
attributes.tag: cad4tb_score
attributes.value: 59.2900009155273
attributes.tag: qxr_score
attributes.value: 0.0799999982118607
attributes.tag: lunit_score
attributes.value: 38.1199989318848
attributes.tag: cohort
attributes.value: TBSQUARE
attributes.tag: extract_date
attributes.value: 4/5/2023
attributes.tag: volume
attributes.value: 150
attributes.tag: library_prep_date
attributes.value: 4/6/2023
attributes.tag: bfcohort
attributes.value: tbs
attributes.tag: reads_all
attributes.value: 24917553
attributes.tag: reads_trimmed_filtered
attributes.value: 24901326
attributes.tag: align_input
attributes.value: 24846065
attributes.tag: align_unique
attributes.value: 9307613
attributes.tag: align_multi
attributes.value: 1668381
attributes.tag: align_tooshort
attributes.value: 13842513
attributes.tag: duplication_rate
attributes.value: 0.45600081247595
attributes.tag: ftcount
attributes.value: 3715391
attributes.tag: bias53
attributes.value: 1.16
attributes.tag: intron_exon_ratio
attributes.value: 0.0673340685925786
attributes.tag: exon_ratio
attributes.value: 0.872527647802514
attributes.tag: exonic_reads
attributes.value: 5021811.5
attributes.tag: intronic_reads
attributes.value: 338139
attributes.tag: intergenic_reads
attributes.value: 395525
attributes.tag: rrna_reads
attributes.value: 531553
attributes.tag: mtrna_reads
attributes.value: 3675229
attributes.tag: nuclear_reads
attributes.value: 1794376
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.0885750716778329
attributes.tag: tb
attributes.value: positive
attributes.tag: tb_binary
attributes.value: 1
attributes.tag: sample_group_granular
attributes.value: positive_TBSQUARE_HIVNegative
attributes.tag: semiquant
attributes.value: High
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing