title: Plasma cell-free RNA, RNA seq gene counts for patient: R2D2_V218_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Positive
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 45
attributes.tag: site
attributes.value: Vietnam
attributes.tag: cad4tb_score
attributes.value: NA
attributes.tag: qxr_score
attributes.value: NA
attributes.tag: lunit_score
attributes.value: NA
attributes.tag: cohort
attributes.value: R2D2
attributes.tag: extract_date
attributes.value: 9/27/2022
attributes.tag: volume
attributes.value: 700
attributes.tag: library_prep_date
attributes.value: 9/28/2022
attributes.tag: bfcohort
attributes.value: r2d2
attributes.tag: reads_all
attributes.value: 32395533
attributes.tag: reads_trimmed_filtered
attributes.value: 31912717
attributes.tag: align_input
attributes.value: 30146300
attributes.tag: align_unique
attributes.value: 7571085
attributes.tag: align_multi
attributes.value: 3429530
attributes.tag: align_tooshort
attributes.value: 18924018
attributes.tag: duplication_rate
attributes.value: 0.585216467004112
attributes.tag: ftcount
attributes.value: 1500092
attributes.tag: bias53
attributes.value: 1.17
attributes.tag: intron_exon_ratio
attributes.value: 0.35081827782686
attributes.tag: exon_ratio
attributes.value: 0.563906702465603
attributes.tag: exonic_reads
attributes.value: 2230385.5
attributes.tag: intronic_reads
attributes.value: 782460
attributes.tag: intergenic_reads
attributes.value: 942393
attributes.tag: rrna_reads
attributes.value: 386908
attributes.tag: mtrna_reads
attributes.value: 628801
attributes.tag: nuclear_reads
attributes.value: 2670729
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.104954430265747
attributes.tag: tb
attributes.value: positive
attributes.tag: tb_binary
attributes.value: 1
attributes.tag: sample_group_granular
attributes.value: positive_R2D2_HIVNegative
attributes.tag: semiquant
attributes.value: High
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing