title: Plasma cell-free RNA, RNA seq gene counts for patient: TBSQUARE_577_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Negative
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 31
attributes.tag: site
attributes.value: Uganda
attributes.tag: cad4tb_score
attributes.value: 41.8199996948242
attributes.tag: qxr_score
attributes.value: 0.0700000002980232
attributes.tag: lunit_score
attributes.value: 1.07000005245209
attributes.tag: cohort
attributes.value: TBSQUARE
attributes.tag: extract_date
attributes.value: 3/28/2023
attributes.tag: volume
attributes.value: 500
attributes.tag: library_prep_date
attributes.value: 3/30/2023
attributes.tag: bfcohort
attributes.value: tbs
attributes.tag: reads_all
attributes.value: 39544267
attributes.tag: reads_trimmed_filtered
attributes.value: 39511950
attributes.tag: align_input
attributes.value: 39431411
attributes.tag: align_unique
attributes.value: 1117897
attributes.tag: align_multi
attributes.value: 3329214
attributes.tag: align_tooshort
attributes.value: 34681601
attributes.tag: duplication_rate
attributes.value: 0.468329306987888
attributes.tag: ftcount
attributes.value: 360315
attributes.tag: bias53
attributes.value: 1.53
attributes.tag: intron_exon_ratio
attributes.value: 0.67980696020736
attributes.tag: exon_ratio
attributes.value: 0.300186538262003
attributes.tag: exonic_reads
attributes.value: 727622
attributes.tag: intronic_reads
attributes.value: 494642.5
attributes.tag: intergenic_reads
attributes.value: 1201635
attributes.tag: rrna_reads
attributes.value: 532535
attributes.tag: mtrna_reads
attributes.value: 192425
attributes.tag: nuclear_reads
attributes.value: 1161936
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.282228061323995
attributes.tag: tb
attributes.value: negative
attributes.tag: tb_binary
attributes.value: 0
attributes.tag: sample_group_granular
attributes.value: negative_TBSQUARE_HIVNegative
attributes.tag: semiquant
attributes.value: Negative
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing