title: Plasma cell-free RNA, RNA seq gene counts for patient: TBSQUARE_557_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Negative
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 39
attributes.tag: site
attributes.value: Uganda
attributes.tag: cad4tb_score
attributes.value: 60.9900016784668
attributes.tag: qxr_score
attributes.value: 0.84799998998642
attributes.tag: lunit_score
attributes.value: 39.5099983215332
attributes.tag: cohort
attributes.value: TBSQUARE
attributes.tag: extract_date
attributes.value: 3/27/2023
attributes.tag: volume
attributes.value: 500
attributes.tag: library_prep_date
attributes.value: 3/28/2023
attributes.tag: bfcohort
attributes.value: tbs
attributes.tag: reads_all
attributes.value: 27694345
attributes.tag: reads_trimmed_filtered
attributes.value: 27676872
attributes.tag: align_input
attributes.value: 27632191
attributes.tag: align_unique
attributes.value: 3289034
attributes.tag: align_multi
attributes.value: 7536014
attributes.tag: align_tooshort
attributes.value: 16427824
attributes.tag: duplication_rate
attributes.value: 0.479640026659673
attributes.tag: ftcount
attributes.value: 1200657
attributes.tag: bias53
attributes.value: 1.24
attributes.tag: intron_exon_ratio
attributes.value: 0.505048061842425
attributes.tag: exon_ratio
attributes.value: 0.36341952194789
attributes.tag: exonic_reads
attributes.value: 2096101.5
attributes.tag: intronic_reads
attributes.value: 1058632
attributes.tag: intergenic_reads
attributes.value: 2612985
attributes.tag: rrna_reads
attributes.value: 981575
attributes.tag: mtrna_reads
attributes.value: 337375
attributes.tag: nuclear_reads
attributes.value: 2949395
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.229966181271664
attributes.tag: tb
attributes.value: negative
attributes.tag: tb_binary
attributes.value: 0
attributes.tag: sample_group_granular
attributes.value: negative_TBSQUARE_HIVNegative
attributes.tag: semiquant
attributes.value: Negative
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing