title: Plasma cell-free RNA, RNA seq gene counts for patient: TBSQUARE_561_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Positive
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 30
attributes.tag: site
attributes.value: Uganda
attributes.tag: cad4tb_score
attributes.value: 84.3300018310547
attributes.tag: qxr_score
attributes.value: 0.827000021934509
attributes.tag: lunit_score
attributes.value: 55.0400009155273
attributes.tag: cohort
attributes.value: TBSQUARE
attributes.tag: extract_date
attributes.value: 3/27/2023
attributes.tag: volume
attributes.value: 500
attributes.tag: library_prep_date
attributes.value: 3/28/2023
attributes.tag: bfcohort
attributes.value: tbs
attributes.tag: reads_all
attributes.value: 23361138
attributes.tag: reads_trimmed_filtered
attributes.value: 23351416
attributes.tag: align_input
attributes.value: 23326091
attributes.tag: align_unique
attributes.value: 1303624
attributes.tag: align_multi
attributes.value: 1090021
attributes.tag: align_tooshort
attributes.value: 20870354
attributes.tag: duplication_rate
attributes.value: 0.609107011175413
attributes.tag: ftcount
attributes.value: 239629
attributes.tag: bias53
attributes.value: 1.26
attributes.tag: intron_exon_ratio
attributes.value: 0.432140292621163
attributes.tag: exon_ratio
attributes.value: 0.471247288698407
attributes.tag: exonic_reads
attributes.value: 405951.5
attributes.tag: intronic_reads
attributes.value: 175428
attributes.tag: intergenic_reads
attributes.value: 280061
attributes.tag: rrna_reads
attributes.value: 116883
attributes.tag: mtrna_reads
attributes.value: 52633
attributes.tag: nuclear_reads
attributes.value: 576244
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.156730047200172
attributes.tag: tb
attributes.value: positive
attributes.tag: tb_binary
attributes.value: 1
attributes.tag: sample_group_granular
attributes.value: positive_TBSQUARE_HIVNegative
attributes.tag: semiquant
attributes.value: Medium
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing