title: Plasma cell-free RNA, RNA seq gene counts for patient: GHL1_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Negative
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: female
attributes.tag: age
attributes.value: 18
attributes.tag: site
attributes.value: Mulago
attributes.tag: cad4tb_score
attributes.value: NA
attributes.tag: qxr_score
attributes.value: NA
attributes.tag: lunit_score
attributes.value: NA
attributes.tag: cohort
attributes.value: GHL
attributes.tag: extract_date
attributes.value: 11/3/2021
attributes.tag: volume
attributes.value: 1000
attributes.tag: library_prep_date
attributes.value: 11/4/2021
attributes.tag: bfcohort
attributes.value: ghl
attributes.tag: reads_all
attributes.value: 29275191
attributes.tag: reads_trimmed_filtered
attributes.value: 29268715
attributes.tag: align_input
attributes.value: 29255333
attributes.tag: align_unique
attributes.value: 3047279
attributes.tag: align_multi
attributes.value: 2749399
attributes.tag: align_tooshort
attributes.value: 23344656
attributes.tag: duplication_rate
attributes.value: 0.705468360979735
attributes.tag: ftcount
attributes.value: 301024
attributes.tag: bias53
attributes.value: 1.26
attributes.tag: intron_exon_ratio
attributes.value: 0.555967312625941
attributes.tag: exon_ratio
attributes.value: 0.400118128214547
attributes.tag: exonic_reads
attributes.value: 519589
attributes.tag: intronic_reads
attributes.value: 288874.5
attributes.tag: intergenic_reads
attributes.value: 490125.5
attributes.tag: rrna_reads
attributes.value: 243548
attributes.tag: mtrna_reads
attributes.value: 8322
attributes.tag: nuclear_reads
attributes.value: 826886
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.225767458072076
attributes.tag: tb
attributes.value: negative
attributes.tag: tb_binary
attributes.value: 0
attributes.tag: sample_group_granular
attributes.value: negative_GHL_HIVNegative
attributes.tag: semiquant
attributes.value: Negative
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing