title: Plasma cell-free RNA, RNA seq gene counts for patient: TBSQUARE_635_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Positive
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 23
attributes.tag: site
attributes.value: Uganda
attributes.tag: cad4tb_score
attributes.value: 70.7900009155273
attributes.tag: qxr_score
attributes.value: 0.606000006198883
attributes.tag: lunit_score
attributes.value: 77.7699966430664
attributes.tag: cohort
attributes.value: TBSQUARE
attributes.tag: extract_date
attributes.value: 4/5/2023
attributes.tag: volume
attributes.value: 500
attributes.tag: library_prep_date
attributes.value: 4/6/2023
attributes.tag: bfcohort
attributes.value: tbs
attributes.tag: reads_all
attributes.value: 64206141
attributes.tag: reads_trimmed_filtered
attributes.value: 64070179
attributes.tag: align_input
attributes.value: 63494215
attributes.tag: align_unique
attributes.value: 32167656
attributes.tag: align_multi
attributes.value: 9615695
attributes.tag: align_tooshort
attributes.value: 21314064
attributes.tag: duplication_rate
attributes.value: 0.658384168715648
attributes.tag: ftcount
attributes.value: 6502395
attributes.tag: bias53
attributes.value: 1.21
attributes.tag: intron_exon_ratio
attributes.value: 0.127621182210228
attributes.tag: exon_ratio
attributes.value: 0.762229349486349
attributes.tag: exonic_reads
attributes.value: 8963465
attributes.tag: intronic_reads
attributes.value: 1143928
attributes.tag: intergenic_reads
attributes.value: 1652145
attributes.tag: rrna_reads
attributes.value: 1070759
attributes.tag: mtrna_reads
attributes.value: 3382870
attributes.tag: nuclear_reads
attributes.value: 6845936
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.0947610815106599
attributes.tag: tb
attributes.value: positive
attributes.tag: tb_binary
attributes.value: 1
attributes.tag: sample_group_granular
attributes.value: positive_TBSQUARE_HIVNegative
attributes.tag: semiquant
attributes.value: Medium
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing