title: Plasma cell-free RNA, RNA seq gene counts for patient: GHL276_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Positive
attributes.tag: hiv
attributes.value: Positive
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 40
attributes.tag: site
attributes.value: Kisenyi
attributes.tag: cad4tb_score
attributes.value: NA
attributes.tag: qxr_score
attributes.value: NA
attributes.tag: lunit_score
attributes.value: NA
attributes.tag: cohort
attributes.value: GHL
attributes.tag: extract_date
attributes.value: 1/11/2022
attributes.tag: volume
attributes.value: 1000
attributes.tag: library_prep_date
attributes.value: 1/12/2022
attributes.tag: bfcohort
attributes.value: ghl
attributes.tag: reads_all
attributes.value: 16389154
attributes.tag: reads_trimmed_filtered
attributes.value: 16348870
attributes.tag: align_input
attributes.value: 16253890
attributes.tag: align_unique
attributes.value: 5073457
attributes.tag: align_multi
attributes.value: 1576878
attributes.tag: align_tooshort
attributes.value: 9363143
attributes.tag: duplication_rate
attributes.value: 0.50548955533027
attributes.tag: ftcount
attributes.value: 213502
attributes.tag: bias53
attributes.value: 1.41
attributes.tag: intron_exon_ratio
attributes.value: 3.01236562501777
attributes.tag: exon_ratio
attributes.value: 0.150201564356632
attributes.tag: exonic_reads
attributes.value: 439767.5
attributes.tag: intronic_reads
attributes.value: 1324740.5
attributes.tag: intergenic_reads
attributes.value: 1163341
attributes.tag: rrna_reads
attributes.value: 167848
attributes.tag: mtrna_reads
attributes.value: 4371
attributes.tag: nuclear_reads
attributes.value: 2513677
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.0624923675376858
attributes.tag: tb
attributes.value: positive
attributes.tag: tb_binary
attributes.value: 1
attributes.tag: sample_group_granular
attributes.value: positive_GHL_HIVPositive
attributes.tag: semiquant
attributes.value: NA
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing