title: Plasma cell-free RNA, RNA seq gene counts for patient: R2D2_U114_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Negative
attributes.tag: hiv
attributes.value: Positive
attributes.tag: Sex
attributes.value: female
attributes.tag: age
attributes.value: 38
attributes.tag: site
attributes.value: Uganda
attributes.tag: cad4tb_score
attributes.value: 30
attributes.tag: qxr_score
attributes.value: 0
attributes.tag: lunit_score
attributes.value: 7
attributes.tag: cohort
attributes.value: R2D2
attributes.tag: extract_date
attributes.value: 9/1/2022
attributes.tag: volume
attributes.value: 750
attributes.tag: library_prep_date
attributes.value: 9/2/2022
attributes.tag: bfcohort
attributes.value: r2d2
attributes.tag: reads_all
attributes.value: 27234873
attributes.tag: reads_trimmed_filtered
attributes.value: 27153129
attributes.tag: align_input
attributes.value: 26824711
attributes.tag: align_unique
attributes.value: 2939997
attributes.tag: align_multi
attributes.value: 771334
attributes.tag: align_tooshort
attributes.value: 23055533
attributes.tag: duplication_rate
attributes.value: 0.638719169740656
attributes.tag: ftcount
attributes.value: 351536
attributes.tag: bias53
attributes.value: 1.31
attributes.tag: intron_exon_ratio
attributes.value: 0.577699177780933
attributes.tag: exon_ratio
attributes.value: 0.466681044641388
attributes.tag: exonic_reads
attributes.value: 524738.5
attributes.tag: intronic_reads
attributes.value: 303141
attributes.tag: intergenic_reads
attributes.value: 296525.5
attributes.tag: rrna_reads
attributes.value: 67820
attributes.tag: mtrna_reads
attributes.value: 165365
attributes.tag: nuclear_reads
attributes.value: 807293
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.0651815800045748
attributes.tag: tb
attributes.value: negative
attributes.tag: tb_binary
attributes.value: 0
attributes.tag: sample_group_granular
attributes.value: negative_R2D2_HIVPositive
attributes.tag: semiquant
attributes.value: Negative
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing