title: Plasma cell-free RNA, RNA seq gene counts for patient: R2D2_V273_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Positive
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 37
attributes.tag: site
attributes.value: Vietnam
attributes.tag: cad4tb_score
attributes.value: 94
attributes.tag: qxr_score
attributes.value: 1
attributes.tag: lunit_score
attributes.value: 96
attributes.tag: cohort
attributes.value: R2D2
attributes.tag: extract_date
attributes.value: 9/27/2022
attributes.tag: volume
attributes.value: 500
attributes.tag: library_prep_date
attributes.value: 9/28/2022
attributes.tag: bfcohort
attributes.value: r2d2
attributes.tag: reads_all
attributes.value: 29960217
attributes.tag: reads_trimmed_filtered
attributes.value: 29625100
attributes.tag: align_input
attributes.value: 28329307
attributes.tag: align_unique
attributes.value: 7576010
attributes.tag: align_multi
attributes.value: 3021772
attributes.tag: align_tooshort
attributes.value: 17530068
attributes.tag: duplication_rate
attributes.value: 0.635290784347812
attributes.tag: ftcount
attributes.value: 1184425
attributes.tag: bias53
attributes.value: 1.23
attributes.tag: intron_exon_ratio
attributes.value: 0.419900583901977
attributes.tag: exon_ratio
attributes.value: 0.53572911534865
attributes.tag: exonic_reads
attributes.value: 1819826
attributes.tag: intronic_reads
attributes.value: 764146
attributes.tag: intergenic_reads
attributes.value: 812942.5
attributes.tag: rrna_reads
attributes.value: 229582
attributes.tag: mtrna_reads
attributes.value: 227666
attributes.tag: nuclear_reads
attributes.value: 2654741
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.0737733970139355
attributes.tag: tb
attributes.value: positive
attributes.tag: tb_binary
attributes.value: 1
attributes.tag: sample_group_granular
attributes.value: positive_R2D2_HIVNegative
attributes.tag: semiquant
attributes.value: High
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing