title: Plasma cell-free RNA, RNA seq gene counts for patient: GHL141_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Positive
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 32
attributes.tag: site
attributes.value: Mulago
attributes.tag: cad4tb_score
attributes.value: NA
attributes.tag: qxr_score
attributes.value: NA
attributes.tag: lunit_score
attributes.value: NA
attributes.tag: cohort
attributes.value: GHL
attributes.tag: extract_date
attributes.value: 1/4/2022
attributes.tag: volume
attributes.value: 1000
attributes.tag: library_prep_date
attributes.value: 1/5/2021
attributes.tag: bfcohort
attributes.value: ghl
attributes.tag: reads_all
attributes.value: 29932923
attributes.tag: reads_trimmed_filtered
attributes.value: 29561999
attributes.tag: align_input
attributes.value: 28636179
attributes.tag: align_unique
attributes.value: 5896174
attributes.tag: align_multi
attributes.value: 4891147
attributes.tag: align_tooshort
attributes.value: 17541772
attributes.tag: duplication_rate
attributes.value: 0.685276680075738
attributes.tag: ftcount
attributes.value: 676056
attributes.tag: bias53
attributes.value: 1.2
attributes.tag: intron_exon_ratio
attributes.value: 0.523963609917794
attributes.tag: exon_ratio
attributes.value: 0.432437974938115
attributes.tag: exonic_reads
attributes.value: 1146081.5
attributes.tag: intronic_reads
attributes.value: 600505
attributes.tag: intergenic_reads
attributes.value: 903693
attributes.tag: rrna_reads
attributes.value: 396617
attributes.tag: mtrna_reads
attributes.value: 15124
attributes.tag: nuclear_reads
attributes.value: 1873747
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.17353711767465
attributes.tag: tb
attributes.value: positive
attributes.tag: tb_binary
attributes.value: 1
attributes.tag: sample_group_granular
attributes.value: positive_GHL_HIVNegative
attributes.tag: semiquant
attributes.value: High
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing