title: Plasma cell-free RNA, RNA seq gene counts for patient: GHL210_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Negative
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 24
attributes.tag: site
attributes.value: Mulago
attributes.tag: cad4tb_score
attributes.value: NA
attributes.tag: qxr_score
attributes.value: NA
attributes.tag: lunit_score
attributes.value: NA
attributes.tag: cohort
attributes.value: GHL
attributes.tag: extract_date
attributes.value: 1/6/2022
attributes.tag: volume
attributes.value: 900
attributes.tag: library_prep_date
attributes.value: 1/7/2021
attributes.tag: bfcohort
attributes.value: ghl
attributes.tag: reads_all
attributes.value: 40444068
attributes.tag: reads_trimmed_filtered
attributes.value: 39859134
attributes.tag: align_input
attributes.value: 38057821
attributes.tag: align_unique
attributes.value: 4911429
attributes.tag: align_multi
attributes.value: 6937948
attributes.tag: align_tooshort
attributes.value: 25738440
attributes.tag: duplication_rate
attributes.value: 0.734212134170204
attributes.tag: ftcount
attributes.value: 449550
attributes.tag: bias53
attributes.value: 1.41
attributes.tag: intron_exon_ratio
attributes.value: 0.782457690273571
attributes.tag: exon_ratio
attributes.value: 0.317142349059001
attributes.tag: exonic_reads
attributes.value: 831960
attributes.tag: intronic_reads
attributes.value: 650973.5
attributes.tag: intergenic_reads
attributes.value: 1140368
attributes.tag: rrna_reads
attributes.value: 565719
attributes.tag: mtrna_reads
attributes.value: 104757
attributes.tag: nuclear_reads
attributes.value: 1520906
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.258156268510009
attributes.tag: tb
attributes.value: negative
attributes.tag: tb_binary
attributes.value: 0
attributes.tag: sample_group_granular
attributes.value: negative_GHL_HIVNegative
attributes.tag: semiquant
attributes.value: Negative
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing