title: Plasma cell-free RNA, RNA seq gene counts for patient: GHL57_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Positive
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 30
attributes.tag: site
attributes.value: Kisenyi
attributes.tag: cad4tb_score
attributes.value: NA
attributes.tag: qxr_score
attributes.value: NA
attributes.tag: lunit_score
attributes.value: NA
attributes.tag: cohort
attributes.value: GHL
attributes.tag: extract_date
attributes.value: 11/10/2021
attributes.tag: volume
attributes.value: 1000
attributes.tag: library_prep_date
attributes.value: 11/11/2021
attributes.tag: bfcohort
attributes.value: ghl
attributes.tag: reads_all
attributes.value: 25025584
attributes.tag: reads_trimmed_filtered
attributes.value: 25020048
attributes.tag: align_input
attributes.value: 25010452
attributes.tag: align_unique
attributes.value: 5771856
attributes.tag: align_multi
attributes.value: 3833346
attributes.tag: align_tooshort
attributes.value: 15243149
attributes.tag: duplication_rate
attributes.value: 0.700141566728047
attributes.tag: ftcount
attributes.value: 474810
attributes.tag: bias53
attributes.value: 1.12
attributes.tag: intron_exon_ratio
attributes.value: 0.796489329859506
attributes.tag: exon_ratio
attributes.value: 0.367325006807575
attributes.tag: exonic_reads
attributes.value: 858611
attributes.tag: intronic_reads
attributes.value: 683874.5
attributes.tag: intergenic_reads
attributes.value: 794984
attributes.tag: rrna_reads
attributes.value: 332075
attributes.tag: mtrna_reads
attributes.value: 48600
attributes.tag: nuclear_reads
attributes.value: 1712374
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.158656104085475
attributes.tag: tb
attributes.value: positive
attributes.tag: tb_binary
attributes.value: 1
attributes.tag: sample_group_granular
attributes.value: positive_GHL_HIVNegative
attributes.tag: semiquant
attributes.value: High
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing