title: Plasma cell-free RNA, RNA seq gene counts for patient: TBSQUARE_564_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Negative
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 31
attributes.tag: site
attributes.value: Uganda
attributes.tag: cad4tb_score
attributes.value: 43.5900001525879
attributes.tag: qxr_score
attributes.value: 0.514999985694885
attributes.tag: lunit_score
attributes.value: 8.71000003814697
attributes.tag: cohort
attributes.value: TBSQUARE
attributes.tag: extract_date
attributes.value: 3/27/2023
attributes.tag: volume
attributes.value: 500
attributes.tag: library_prep_date
attributes.value: 3/28/2023
attributes.tag: bfcohort
attributes.value: tbs
attributes.tag: reads_all
attributes.value: 28056811
attributes.tag: reads_trimmed_filtered
attributes.value: 28044490
attributes.tag: align_input
attributes.value: 28001415
attributes.tag: align_unique
attributes.value: 1494148
attributes.tag: align_multi
attributes.value: 1607562
attributes.tag: align_tooshort
attributes.value: 24837368
attributes.tag: duplication_rate
attributes.value: 0.353869981232065
attributes.tag: ftcount
attributes.value: 578537
attributes.tag: bias53
attributes.value: 1.26
attributes.tag: intron_exon_ratio
attributes.value: 0.362068357931729
attributes.tag: exon_ratio
attributes.value: 0.482149336099281
attributes.tag: exonic_reads
attributes.value: 922248.5
attributes.tag: intronic_reads
attributes.value: 333917
attributes.tag: intergenic_reads
attributes.value: 656620.5
attributes.tag: rrna_reads
attributes.value: 266199
attributes.tag: mtrna_reads
attributes.value: 64047
attributes.tag: nuclear_reads
attributes.value: 1245500
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.16893522179336
attributes.tag: tb
attributes.value: negative
attributes.tag: tb_binary
attributes.value: 0
attributes.tag: sample_group_granular
attributes.value: negative_TBSQUARE_HIVNegative
attributes.tag: semiquant
attributes.value: Negative
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing