title: Plasma cell-free RNA, RNA seq gene counts for patient: R2D2_U371_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Positive
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: female
attributes.tag: age
attributes.value: 21
attributes.tag: site
attributes.value: Uganda
attributes.tag: cad4tb_score
attributes.value: 46
attributes.tag: qxr_score
attributes.value: 0
attributes.tag: lunit_score
attributes.value: 6
attributes.tag: cohort
attributes.value: R2D2
attributes.tag: extract_date
attributes.value: 9/12/2022
attributes.tag: volume
attributes.value: 750
attributes.tag: library_prep_date
attributes.value: 9/13/2022
attributes.tag: bfcohort
attributes.value: r2d2
attributes.tag: reads_all
attributes.value: 30856137
attributes.tag: reads_trimmed_filtered
attributes.value: 30740507
attributes.tag: align_input
attributes.value: 30304730
attributes.tag: align_unique
attributes.value: 10368772
attributes.tag: align_multi
attributes.value: 6878745
attributes.tag: align_tooshort
attributes.value: 12754194
attributes.tag: duplication_rate
attributes.value: 0.639396028393153
attributes.tag: ftcount
attributes.value: 2012743
attributes.tag: bias53
attributes.value: 1.29
attributes.tag: intron_exon_ratio
attributes.value: 0.258570293754395
attributes.tag: exon_ratio
attributes.value: 0.612564052428694
attributes.tag: exonic_reads
attributes.value: 3247219.5
attributes.tag: intronic_reads
attributes.value: 839634.5
attributes.tag: intergenic_reads
attributes.value: 1214174.5
attributes.tag: rrna_reads
attributes.value: 617040
attributes.tag: mtrna_reads
attributes.value: 321834
attributes.tag: nuclear_reads
attributes.value: 3804875
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.130074335720545
attributes.tag: tb
attributes.value: positive
attributes.tag: tb_binary
attributes.value: 1
attributes.tag: sample_group_granular
attributes.value: positive_R2D2_HIVNegative
attributes.tag: semiquant
attributes.value: Low
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing