title: Plasma cell-free RNA, RNA seq gene counts for patient: GHL30_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Negative
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: female
attributes.tag: age
attributes.value: 23
attributes.tag: site
attributes.value: Mulago
attributes.tag: cad4tb_score
attributes.value: NA
attributes.tag: qxr_score
attributes.value: NA
attributes.tag: lunit_score
attributes.value: NA
attributes.tag: cohort
attributes.value: GHL
attributes.tag: extract_date
attributes.value: 11/8/2021
attributes.tag: volume
attributes.value: 1000
attributes.tag: library_prep_date
attributes.value: 11/9/2021
attributes.tag: bfcohort
attributes.value: ghl
attributes.tag: reads_all
attributes.value: 47533241
attributes.tag: reads_trimmed_filtered
attributes.value: 47476141
attributes.tag: align_input
attributes.value: 47298457
attributes.tag: align_unique
attributes.value: 1701678
attributes.tag: align_multi
attributes.value: 33025139
attributes.tag: align_tooshort
attributes.value: 12331350
attributes.tag: duplication_rate
attributes.value: 0.611266768296802
attributes.tag: ftcount
attributes.value: 466273
attributes.tag: bias53
attributes.value: 1.31
attributes.tag: intron_exon_ratio
attributes.value: 1.49360562519441
attributes.tag: exon_ratio
attributes.value: 0.133630102757215
attributes.tag: exonic_reads
attributes.value: 1832470
attributes.tag: intronic_reads
attributes.value: 2736987.5
attributes.tag: intergenic_reads
attributes.value: 9143545.5
attributes.tag: rrna_reads
attributes.value: 5768118
attributes.tag: mtrna_reads
attributes.value: 81316
attributes.tag: nuclear_reads
attributes.value: 6483921
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.467684421635476
attributes.tag: tb
attributes.value: negative
attributes.tag: tb_binary
attributes.value: 0
attributes.tag: sample_group_granular
attributes.value: negative_GHL_HIVNegative
attributes.tag: semiquant
attributes.value: Negative
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing