title: Plasma cell-free RNA, RNA seq gene counts for patient: R2D2_P245_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Positive
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: female
attributes.tag: age
attributes.value: 61
attributes.tag: site
attributes.value: Philippines
attributes.tag: cad4tb_score
attributes.value: 26
attributes.tag: qxr_score
attributes.value: 0
attributes.tag: lunit_score
attributes.value: 7
attributes.tag: cohort
attributes.value: R2D2
attributes.tag: extract_date
attributes.value: 8/29/2022
attributes.tag: volume
attributes.value: 750
attributes.tag: library_prep_date
attributes.value: 8/31/2022
attributes.tag: bfcohort
attributes.value: r2d2
attributes.tag: reads_all
attributes.value: 27066699
attributes.tag: reads_trimmed_filtered
attributes.value: 26999477
attributes.tag: align_input
attributes.value: 26713369
attributes.tag: align_unique
attributes.value: 8327566
attributes.tag: align_multi
attributes.value: 3961960
attributes.tag: align_tooshort
attributes.value: 14225837
attributes.tag: duplication_rate
attributes.value: 0.617639621339812
attributes.tag: ftcount
attributes.value: 1840994
attributes.tag: bias53
attributes.value: 1.19
attributes.tag: intron_exon_ratio
attributes.value: 0.161593310215927
attributes.tag: exon_ratio
attributes.value: 0.693411278850335
attributes.tag: exonic_reads
attributes.value: 2652402.5
attributes.tag: intronic_reads
attributes.value: 428610.5
attributes.tag: intergenic_reads
attributes.value: 744137.5
attributes.tag: rrna_reads
attributes.value: 343992
attributes.tag: mtrna_reads
attributes.value: 139891
attributes.tag: nuclear_reads
attributes.value: 2853651
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.103067714066733
attributes.tag: tb
attributes.value: positive
attributes.tag: tb_binary
attributes.value: 1
attributes.tag: sample_group_granular
attributes.value: positive_R2D2_HIVNegative
attributes.tag: semiquant
attributes.value: Low
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing