title: Plasma cell-free RNA, RNA seq gene counts for patient: GHL186_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Negative
attributes.tag: hiv
attributes.value: Positive
attributes.tag: Sex
attributes.value: female
attributes.tag: age
attributes.value: 38
attributes.tag: site
attributes.value: Kisenyi
attributes.tag: cad4tb_score
attributes.value: NA
attributes.tag: qxr_score
attributes.value: NA
attributes.tag: lunit_score
attributes.value: NA
attributes.tag: cohort
attributes.value: GHL
attributes.tag: extract_date
attributes.value: 11/22/2021
attributes.tag: volume
attributes.value: 800
attributes.tag: library_prep_date
attributes.value: 11/23/2021
attributes.tag: bfcohort
attributes.value: ghl
attributes.tag: reads_all
attributes.value: 30297115
attributes.tag: reads_trimmed_filtered
attributes.value: 30254965
attributes.tag: align_input
attributes.value: 30134058
attributes.tag: align_unique
attributes.value: 9449893
attributes.tag: align_multi
attributes.value: 2610688
attributes.tag: align_tooshort
attributes.value: 17881323
attributes.tag: duplication_rate
attributes.value: 0.843528536750704
attributes.tag: ftcount
attributes.value: 260491
attributes.tag: bias53
attributes.value: 1.29
attributes.tag: intron_exon_ratio
attributes.value: 1.42906255060247
attributes.tag: exon_ratio
attributes.value: 0.273460426675667
attributes.tag: exonic_reads
attributes.value: 441554.5
attributes.tag: intronic_reads
attributes.value: 631009
attributes.tag: intergenic_reads
attributes.value: 542129
attributes.tag: rrna_reads
attributes.value: 95973
attributes.tag: mtrna_reads
attributes.value: 5375
attributes.tag: nuclear_reads
attributes.value: 1383402
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.0646391648425661
attributes.tag: tb
attributes.value: negative
attributes.tag: tb_binary
attributes.value: 0
attributes.tag: sample_group_granular
attributes.value: negative_GHL_HIVPositive
attributes.tag: semiquant
attributes.value: Negative
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing