title: Plasma cell-free RNA, RNA seq gene counts for patient: R2D2_P22_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Positive
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 27
attributes.tag: site
attributes.value: Philippines
attributes.tag: cad4tb_score
attributes.value: 78
attributes.tag: qxr_score
attributes.value: 1
attributes.tag: lunit_score
attributes.value: 98
attributes.tag: cohort
attributes.value: R2D2
attributes.tag: extract_date
attributes.value: 8/23/2002
attributes.tag: volume
attributes.value: 700
attributes.tag: library_prep_date
attributes.value: 8/24/2022
attributes.tag: bfcohort
attributes.value: r2d2
attributes.tag: reads_all
attributes.value: 34838569
attributes.tag: reads_trimmed_filtered
attributes.value: 34731205
attributes.tag: align_input
attributes.value: 34321739
attributes.tag: align_unique
attributes.value: 14886869
attributes.tag: align_multi
attributes.value: 6251412
attributes.tag: align_tooshort
attributes.value: 12876809
attributes.tag: duplication_rate
attributes.value: 0.540005193926429
attributes.tag: ftcount
attributes.value: 5119903
attributes.tag: bias53
attributes.value: 1.23
attributes.tag: intron_exon_ratio
attributes.value: 0.100148935711449
attributes.tag: exon_ratio
attributes.value: 0.778665899852084
attributes.tag: exonic_reads
attributes.value: 6933528.5
attributes.tag: intronic_reads
attributes.value: 694385.5
attributes.tag: intergenic_reads
attributes.value: 1276455
attributes.tag: rrna_reads
attributes.value: 931609
attributes.tag: mtrna_reads
attributes.value: 2062139
attributes.tag: nuclear_reads
attributes.value: 5507335
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.109587096138221
attributes.tag: tb
attributes.value: positive
attributes.tag: tb_binary
attributes.value: 1
attributes.tag: sample_group_granular
attributes.value: positive_R2D2_HIVNegative
attributes.tag: semiquant
attributes.value: High
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing