title: Plasma cell-free RNA, RNA seq gene counts for patient: GHL248_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Positive
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 23
attributes.tag: site
attributes.value: Kisenyi
attributes.tag: cad4tb_score
attributes.value: NA
attributes.tag: qxr_score
attributes.value: NA
attributes.tag: lunit_score
attributes.value: NA
attributes.tag: cohort
attributes.value: GHL
attributes.tag: extract_date
attributes.value: 1/6/2022
attributes.tag: volume
attributes.value: 800
attributes.tag: library_prep_date
attributes.value: 1/12/2021
attributes.tag: bfcohort
attributes.value: ghl
attributes.tag: reads_all
attributes.value: 16369031
attributes.tag: reads_trimmed_filtered
attributes.value: 16351734
attributes.tag: align_input
attributes.value: 16312544
attributes.tag: align_unique
attributes.value: 6453781
attributes.tag: align_multi
attributes.value: 2628530
attributes.tag: align_tooshort
attributes.value: 7061277
attributes.tag: duplication_rate
attributes.value: 0.661800660105667
attributes.tag: ftcount
attributes.value: 536229
attributes.tag: bias53
attributes.value: 1.36
attributes.tag: intron_exon_ratio
attributes.value: 1.08223162706778
attributes.tag: exon_ratio
attributes.value: 0.313481043773423
attributes.tag: exonic_reads
attributes.value: 847435.5
attributes.tag: intronic_reads
attributes.value: 917121.5
attributes.tag: intergenic_reads
attributes.value: 938750
attributes.tag: rrna_reads
attributes.value: 237897
attributes.tag: mtrna_reads
attributes.value: 59346
attributes.tag: nuclear_reads
attributes.value: 2138236
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.0976797582734238
attributes.tag: tb
attributes.value: positive
attributes.tag: tb_binary
attributes.value: 1
attributes.tag: sample_group_granular
attributes.value: positive_GHL_HIVNegative
attributes.tag: semiquant
attributes.value: Low
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing