title: Plasma cell-free RNA, RNA seq gene counts for patient: GHL69_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Negative
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: female
attributes.tag: age
attributes.value: 54
attributes.tag: site
attributes.value: Mulago
attributes.tag: cad4tb_score
attributes.value: NA
attributes.tag: qxr_score
attributes.value: NA
attributes.tag: lunit_score
attributes.value: NA
attributes.tag: cohort
attributes.value: GHL
attributes.tag: extract_date
attributes.value: 11/15/2021
attributes.tag: volume
attributes.value: 1000
attributes.tag: library_prep_date
attributes.value: 11/16/2021
attributes.tag: bfcohort
attributes.value: ghl
attributes.tag: reads_all
attributes.value: 46940333
attributes.tag: reads_trimmed_filtered
attributes.value: 46879692
attributes.tag: align_input
attributes.value: 46704333
attributes.tag: align_unique
attributes.value: 8938370
attributes.tag: align_multi
attributes.value: 8436064
attributes.tag: align_tooshort
attributes.value: 28979590
attributes.tag: duplication_rate
attributes.value: 0.805854152309105
attributes.tag: ftcount
attributes.value: 612589
attributes.tag: bias53
attributes.value: 1.28
attributes.tag: intron_exon_ratio
attributes.value: 0.493709746272146
attributes.tag: exon_ratio
attributes.value: 0.412417553928184
attributes.tag: exonic_reads
attributes.value: 1045943.5
attributes.tag: intronic_reads
attributes.value: 516392.5
attributes.tag: intergenic_reads
attributes.value: 973791.5
attributes.tag: rrna_reads
attributes.value: 503431
attributes.tag: mtrna_reads
attributes.value: 12143
attributes.tag: nuclear_reads
attributes.value: 1580738
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.240150798163632
attributes.tag: tb
attributes.value: negative
attributes.tag: tb_binary
attributes.value: 0
attributes.tag: sample_group_granular
attributes.value: negative_GHL_HIVNegative
attributes.tag: semiquant
attributes.value: Negative
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing