title: Plasma cell-free RNA, RNA seq gene counts for patient: TBSQUARE_554_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Negative
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: female
attributes.tag: age
attributes.value: 32
attributes.tag: site
attributes.value: Uganda
attributes.tag: cad4tb_score
attributes.value: 46.189998626709
attributes.tag: qxr_score
attributes.value: 0.028999999165535
attributes.tag: lunit_score
attributes.value: 4.05000019073486
attributes.tag: cohort
attributes.value: TBSQUARE
attributes.tag: extract_date
attributes.value: 3/27/2023
attributes.tag: volume
attributes.value: 500
attributes.tag: library_prep_date
attributes.value: 3/28/2023
attributes.tag: bfcohort
attributes.value: tbs
attributes.tag: reads_all
attributes.value: 32376891
attributes.tag: reads_trimmed_filtered
attributes.value: 32361048
attributes.tag: align_input
attributes.value: 32293026
attributes.tag: align_unique
attributes.value: 2651760
attributes.tag: align_multi
attributes.value: 3106039
attributes.tag: align_tooshort
attributes.value: 26444516
attributes.tag: duplication_rate
attributes.value: 0.382363109766181
attributes.tag: ftcount
attributes.value: 1106326
attributes.tag: bias53
attributes.value: 1.12
attributes.tag: intron_exon_ratio
attributes.value: 0.393345285225505
attributes.tag: exon_ratio
attributes.value: 0.448775750738423
attributes.tag: exonic_reads
attributes.value: 1538668.5
attributes.tag: intronic_reads
attributes.value: 605228
attributes.tag: intergenic_reads
attributes.value: 1284694.5
attributes.tag: rrna_reads
attributes.value: 711421
attributes.tag: mtrna_reads
attributes.value: 671337
attributes.tag: nuclear_reads
attributes.value: 1597402
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.238719062063782
attributes.tag: tb
attributes.value: negative
attributes.tag: tb_binary
attributes.value: 0
attributes.tag: sample_group_granular
attributes.value: negative_TBSQUARE_HIVNegative
attributes.tag: semiquant
attributes.value: Negative
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing