title: Plasma cell-free RNA, RNA seq gene counts for patient: GHL126_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Positive
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 29
attributes.tag: site
attributes.value: Mulago
attributes.tag: cad4tb_score
attributes.value: NA
attributes.tag: qxr_score
attributes.value: NA
attributes.tag: lunit_score
attributes.value: NA
attributes.tag: cohort
attributes.value: GHL
attributes.tag: extract_date
attributes.value: 11/18/2021
attributes.tag: volume
attributes.value: 1000
attributes.tag: library_prep_date
attributes.value: 11/19/2021
attributes.tag: bfcohort
attributes.value: ghl
attributes.tag: reads_all
attributes.value: 26907445
attributes.tag: reads_trimmed_filtered
attributes.value: 26866733
attributes.tag: align_input
attributes.value: 26772091
attributes.tag: align_unique
attributes.value: 10140088
attributes.tag: align_multi
attributes.value: 5734350
attributes.tag: align_tooshort
attributes.value: 10664732
attributes.tag: duplication_rate
attributes.value: 0.694215687237552
attributes.tag: ftcount
attributes.value: 1091320
attributes.tag: bias53
attributes.value: 1.19
attributes.tag: intron_exon_ratio
attributes.value: 0.466103292762761
attributes.tag: exon_ratio
attributes.value: 0.47387600519325
attributes.tag: exonic_reads
attributes.value: 1707806
attributes.tag: intronic_reads
attributes.value: 796014
attributes.tag: intergenic_reads
attributes.value: 1100089
attributes.tag: rrna_reads
attributes.value: 491918
attributes.tag: mtrna_reads
attributes.value: 33935
attributes.tag: nuclear_reads
attributes.value: 2638710
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.15544579140943
attributes.tag: tb
attributes.value: positive
attributes.tag: tb_binary
attributes.value: 1
attributes.tag: sample_group_granular
attributes.value: positive_GHL_HIVNegative
attributes.tag: semiquant
attributes.value: Low
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing