title: Plasma cell-free RNA, RNA seq gene counts for patient: GHL192_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Positive
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: female
attributes.tag: age
attributes.value: 21
attributes.tag: site
attributes.value: Kisenyi
attributes.tag: cad4tb_score
attributes.value: NA
attributes.tag: qxr_score
attributes.value: NA
attributes.tag: lunit_score
attributes.value: NA
attributes.tag: cohort
attributes.value: GHL
attributes.tag: extract_date
attributes.value: 11/22/2021
attributes.tag: volume
attributes.value: 600
attributes.tag: library_prep_date
attributes.value: 11/23/2021
attributes.tag: bfcohort
attributes.value: ghl
attributes.tag: reads_all
attributes.value: 39399727
attributes.tag: reads_trimmed_filtered
attributes.value: 39374054
attributes.tag: align_input
attributes.value: 39311504
attributes.tag: align_unique
attributes.value: 10043765
attributes.tag: align_multi
attributes.value: 5925982
attributes.tag: align_tooshort
attributes.value: 23135938
attributes.tag: duplication_rate
attributes.value: 0.817479445503846
attributes.tag: ftcount
attributes.value: 764889
attributes.tag: bias53
attributes.value: 1.21
attributes.tag: intron_exon_ratio
attributes.value: 0.380892442798874
attributes.tag: exon_ratio
attributes.value: 0.508974386614274
attributes.tag: exonic_reads
attributes.value: 1121394
attributes.tag: intronic_reads
attributes.value: 427130.5
attributes.tag: intergenic_reads
attributes.value: 654718
attributes.tag: rrna_reads
attributes.value: 318955
attributes.tag: mtrna_reads
attributes.value: 22107
attributes.tag: nuclear_reads
attributes.value: 1602938
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.164071502057613
attributes.tag: tb
attributes.value: positive
attributes.tag: tb_binary
attributes.value: 1
attributes.tag: sample_group_granular
attributes.value: positive_GHL_HIVNegative
attributes.tag: semiquant
attributes.value: High
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing