title: Plasma cell-free RNA, RNA seq gene counts for patient: TBSQUARE_610_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Negative
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: female
attributes.tag: age
attributes.value: 31
attributes.tag: site
attributes.value: Uganda
attributes.tag: cad4tb_score
attributes.value: 32.1300010681152
attributes.tag: qxr_score
attributes.value: 0.0489999987185001
attributes.tag: lunit_score
attributes.value: 2.71000003814697
attributes.tag: cohort
attributes.value: TBSQUARE
attributes.tag: extract_date
attributes.value: 4/3/2023
attributes.tag: volume
attributes.value: 500
attributes.tag: library_prep_date
attributes.value: 4/4/2023
attributes.tag: bfcohort
attributes.value: tbs
attributes.tag: reads_all
attributes.value: 40690343
attributes.tag: reads_trimmed_filtered
attributes.value: 40677226
attributes.tag: align_input
attributes.value: 40636046
attributes.tag: align_unique
attributes.value: 1562614
attributes.tag: align_multi
attributes.value: 1266850
attributes.tag: align_tooshort
attributes.value: 37746411
attributes.tag: duplication_rate
attributes.value: 0.563077055445693
attributes.tag: ftcount
attributes.value: 341553
attributes.tag: bias53
attributes.value: 1.28
attributes.tag: intron_exon_ratio
attributes.value: 0.400255259598621
attributes.tag: exon_ratio
attributes.value: 0.474983428738003
attributes.tag: exonic_reads
attributes.value: 511636
attributes.tag: intronic_reads
attributes.value: 204785
attributes.tag: intergenic_reads
attributes.value: 360745
attributes.tag: rrna_reads
attributes.value: 172773
attributes.tag: mtrna_reads
attributes.value: 114960
attributes.tag: nuclear_reads
attributes.value: 616201
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.191134529733365
attributes.tag: tb
attributes.value: negative
attributes.tag: tb_binary
attributes.value: 0
attributes.tag: sample_group_granular
attributes.value: negative_TBSQUARE_HIVNegative
attributes.tag: semiquant
attributes.value: Negative
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing