title: Plasma cell-free RNA, RNA seq gene counts for patient: R2D2_P108_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Negative
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 23
attributes.tag: site
attributes.value: Philippines
attributes.tag: cad4tb_score
attributes.value: 5
attributes.tag: qxr_score
attributes.value: 0
attributes.tag: lunit_score
attributes.value: 1
attributes.tag: cohort
attributes.value: R2D2
attributes.tag: extract_date
attributes.value: 8/23/2002
attributes.tag: volume
attributes.value: 600
attributes.tag: library_prep_date
attributes.value: 8/24/2022
attributes.tag: bfcohort
attributes.value: r2d2
attributes.tag: reads_all
attributes.value: 27898696
attributes.tag: reads_trimmed_filtered
attributes.value: 27801186
attributes.tag: align_input
attributes.value: 27424695
attributes.tag: align_unique
attributes.value: 2906480
attributes.tag: align_multi
attributes.value: 3061042
attributes.tag: align_tooshort
attributes.value: 21269467
attributes.tag: duplication_rate
attributes.value: 0.532940069235066
attributes.tag: ftcount
attributes.value: 729338
attributes.tag: bias53
attributes.value: 1.16
attributes.tag: intron_exon_ratio
attributes.value: 0.306523551898957
attributes.tag: exon_ratio
attributes.value: 0.5224405902362
attributes.tag: exonic_reads
attributes.value: 1292762
attributes.tag: intronic_reads
attributes.value: 396262
attributes.tag: intergenic_reads
attributes.value: 785443
attributes.tag: rrna_reads
attributes.value: 320988
attributes.tag: mtrna_reads
attributes.value: 66321
attributes.tag: nuclear_reads
attributes.value: 1686867
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.154754466351939
attributes.tag: tb
attributes.value: negative
attributes.tag: tb_binary
attributes.value: 0
attributes.tag: sample_group_granular
attributes.value: negative_R2D2_HIVNegative
attributes.tag: semiquant
attributes.value: Negative
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing