title: Plasma cell-free RNA, RNA seq gene counts for patient: TBSQUARE_697_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Positive
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 20
attributes.tag: site
attributes.value: Uganda
attributes.tag: cad4tb_score
attributes.value: 70.9499969482422
attributes.tag: qxr_score
attributes.value: 0.500999987125397
attributes.tag: lunit_score
attributes.value: 86.0899963378906
attributes.tag: cohort
attributes.value: TBSQUARE
attributes.tag: extract_date
attributes.value: 4/8/2023
attributes.tag: volume
attributes.value: 350
attributes.tag: library_prep_date
attributes.value: 4/10/2023
attributes.tag: bfcohort
attributes.value: tbs
attributes.tag: reads_all
attributes.value: 14760765
attributes.tag: reads_trimmed_filtered
attributes.value: 14758164
attributes.tag: align_input
attributes.value: 14751003
attributes.tag: align_unique
attributes.value: 782167
attributes.tag: align_multi
attributes.value: 513202
attributes.tag: align_tooshort
attributes.value: 13442389
attributes.tag: duplication_rate
attributes.value: 0.3248275345181
attributes.tag: ftcount
attributes.value: 390151
attributes.tag: bias53
attributes.value: 1.24
attributes.tag: intron_exon_ratio
attributes.value: 0.374157019411153
attributes.tag: exon_ratio
attributes.value: 0.59599230671193
attributes.tag: exonic_reads
attributes.value: 514395
attributes.tag: intronic_reads
attributes.value: 192464.5
attributes.tag: intergenic_reads
attributes.value: 156230.5
attributes.tag: rrna_reads
attributes.value: 157308
attributes.tag: mtrna_reads
attributes.value: 56026
attributes.tag: nuclear_reads
attributes.value: 655419
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.18107333154533
attributes.tag: tb
attributes.value: positive
attributes.tag: tb_binary
attributes.value: 1
attributes.tag: sample_group_granular
attributes.value: positive_TBSQUARE_HIVNegative
attributes.tag: semiquant
attributes.value: High
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing