title: Plasma cell-free RNA, RNA seq gene counts for patient: GHL56_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Positive
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: male
attributes.tag: age
attributes.value: 36
attributes.tag: site
attributes.value: Kisenyi
attributes.tag: cad4tb_score
attributes.value: NA
attributes.tag: qxr_score
attributes.value: NA
attributes.tag: lunit_score
attributes.value: NA
attributes.tag: cohort
attributes.value: GHL
attributes.tag: extract_date
attributes.value: 11/10/2021
attributes.tag: volume
attributes.value: 1000
attributes.tag: library_prep_date
attributes.value: 11/11/2021
attributes.tag: bfcohort
attributes.value: ghl
attributes.tag: reads_all
attributes.value: 14572152
attributes.tag: reads_trimmed_filtered
attributes.value: 14569826
attributes.tag: align_input
attributes.value: 14566017
attributes.tag: align_unique
attributes.value: 5394324
attributes.tag: align_multi
attributes.value: 1483241
attributes.tag: align_tooshort
attributes.value: 7525078
attributes.tag: duplication_rate
attributes.value: 0.650399979395224
attributes.tag: ftcount
attributes.value: 173812
attributes.tag: bias53
attributes.value: 1.5
attributes.tag: intron_exon_ratio
attributes.value: 2.68711837657871
attributes.tag: exon_ratio
attributes.value: 0.168538798442491
attributes.tag: exonic_reads
attributes.value: 355471.5
attributes.tag: intronic_reads
attributes.value: 955194
attributes.tag: intergenic_reads
attributes.value: 798472
attributes.tag: rrna_reads
attributes.value: 118217
attributes.tag: mtrna_reads
attributes.value: 11218
attributes.tag: nuclear_reads
attributes.value: 1820344
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.0606309740744977
attributes.tag: tb
attributes.value: positive
attributes.tag: tb_binary
attributes.value: 1
attributes.tag: sample_group_granular
attributes.value: positive_GHL_HIVNegative
attributes.tag: semiquant
attributes.value: Medium
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing