title: Plasma cell-free RNA, RNA seq gene counts for patient: TBSQUARE_619_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Negative
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: female
attributes.tag: age
attributes.value: 34
attributes.tag: site
attributes.value: Uganda
attributes.tag: cad4tb_score
attributes.value: 24.7700004577637
attributes.tag: qxr_score
attributes.value: 0.101999998092651
attributes.tag: lunit_score
attributes.value: 2.48000001907349
attributes.tag: cohort
attributes.value: TBSQUARE
attributes.tag: extract_date
attributes.value: 4/5/2023
attributes.tag: volume
attributes.value: 500
attributes.tag: library_prep_date
attributes.value: 4/6/2023
attributes.tag: bfcohort
attributes.value: tbs
attributes.tag: reads_all
attributes.value: 13266566
attributes.tag: reads_trimmed_filtered
attributes.value: 13251176
attributes.tag: align_input
attributes.value: 13192813
attributes.tag: align_unique
attributes.value: 857190
attributes.tag: align_multi
attributes.value: 1065354
attributes.tag: align_tooshort
attributes.value: 11227495
attributes.tag: duplication_rate
attributes.value: 0.44275864313639
attributes.tag: ftcount
attributes.value: 201883
attributes.tag: bias53
attributes.value: 1.16
attributes.tag: intron_exon_ratio
attributes.value: 0.754898536929096
attributes.tag: exon_ratio
attributes.value: 0.319446734360422
attributes.tag: exonic_reads
attributes.value: 323566
attributes.tag: intronic_reads
attributes.value: 244259.5
attributes.tag: intergenic_reads
attributes.value: 445069.5
attributes.tag: rrna_reads
attributes.value: 181138
attributes.tag: mtrna_reads
attributes.value: 39476
attributes.tag: nuclear_reads
attributes.value: 589238
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.223668028232319
attributes.tag: tb
attributes.value: negative
attributes.tag: tb_binary
attributes.value: 0
attributes.tag: sample_group_granular
attributes.value: negative_TBSQUARE_HIVNegative
attributes.tag: semiquant
attributes.value: Negative
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing