title: Plasma cell-free RNA, RNA seq gene counts for patient: GHL75_combined_61bp
organism: Homo sapiens
attributes.tag: source_name
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: tissue
attributes.value: Plasma, extracted cell-free RNA
attributes.tag: micro_ref_stndrd
attributes.value: TB Negative
attributes.tag: hiv
attributes.value: Negative
attributes.tag: Sex
attributes.value: female
attributes.tag: age
attributes.value: 34
attributes.tag: site
attributes.value: Mulago
attributes.tag: cad4tb_score
attributes.value: NA
attributes.tag: qxr_score
attributes.value: NA
attributes.tag: lunit_score
attributes.value: NA
attributes.tag: cohort
attributes.value: GHL
attributes.tag: extract_date
attributes.value: 11/17/2021
attributes.tag: volume
attributes.value: 1000
attributes.tag: library_prep_date
attributes.value: 11/22/2021
attributes.tag: bfcohort
attributes.value: ghl
attributes.tag: reads_all
attributes.value: 24836564
attributes.tag: reads_trimmed_filtered
attributes.value: 24821979
attributes.tag: align_input
attributes.value: 24788242
attributes.tag: align_unique
attributes.value: 4725541
attributes.tag: align_multi
attributes.value: 3663499
attributes.tag: align_tooshort
attributes.value: 16238335
attributes.tag: duplication_rate
attributes.value: 0.810222577951325
attributes.tag: ftcount
attributes.value: 324305
attributes.tag: bias53
attributes.value: 1.21
attributes.tag: intron_exon_ratio
attributes.value: 0.583486736059117
attributes.tag: exon_ratio
attributes.value: 0.419955058092321
attributes.tag: exonic_reads
attributes.value: 532911
attributes.tag: intronic_reads
attributes.value: 310946.5
attributes.tag: intergenic_reads
attributes.value: 425114
attributes.tag: rrna_reads
attributes.value: 193368
attributes.tag: mtrna_reads
attributes.value: 4557
attributes.tag: nuclear_reads
attributes.value: 895521
attributes.tag: passqc
attributes.value: TRUE
attributes.tag: rrna_fraction
attributes.value: 0.176842752179806
attributes.tag: tb
attributes.value: negative
attributes.tag: tb_binary
attributes.value: 0
attributes.tag: sample_group_granular
attributes.value: negative_GHL_HIVNegative
attributes.tag: semiquant
attributes.value: Negative
attributes.tag: geo_loc_name
attributes.value: missing
attributes.tag: collection_date
attributes.value: missing