organism: lake water metagenome
attributes.tag: ENA first public
attributes.value: 2025-07-11
attributes.tag: INSDC center name
attributes.value: Genoscope CEA
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: NAP11
attributes.tag: amount or size of sample collected
attributes.value: 60
attributes.tag: broad-scale environmental context
attributes.value: aquatic biome [ENVO:00002030]
attributes.tag: collection date
attributes.value: 2018-11-27
attributes.tag: depth
attributes.value: 80
attributes.tag: elevation
attributes.value: 1197
attributes.tag: environmental medium
attributes.value: lake water [ENVO:04000007]
attributes.tag: geographic location (country and/or sea)
attributes.value: France
attributes.tag: geographic location (latitude)
attributes.value: 45.495395
attributes.tag: geographic location (longitude)
attributes.value: 2.888415
attributes.tag: geographic location (region and locality)
attributes.value: Lake Pavin, Auvergne, France
attributes.tag: local environmental context
attributes.value: freshwater lake [ENVO:00000021]
attributes.tag: oxygenation status of sample
attributes.value: anaerobic
attributes.tag: project name
attributes.value: Microstore
attributes.tag: sample collection device
attributes.value: Van Dorn bottle
attributes.tag: sample material processing
attributes.value: Water was prefiltered with decreasing pore-size (150µm, 50µm, 10µm) coupled to tangential filtration on a Spectrum KrosFlo PES 0.65 μm column to retain 1 L of concentrate. The sample was then centrifuged at 10000g with 0.01% pluronic acid. The pellet was split for DNA and RNA extraction.
attributes.tag: sample name
attributes.value: NAP11
attributes.tag: scientific_name
attributes.value: lake water metagenome
attributes.tag: size-fraction lower threshold
attributes.value: 0.65
attributes.tag: size-fraction upper threshold
attributes.value: 10