organism: Acetobacteraceae bacterium
attributes.tag: 16S recovered
attributes.value: Yes
attributes.tag: 16S recovery software
attributes.value: PROKKA (version 1.14.6)
attributes.tag: ENA first public
attributes.value: 2025-04-11
attributes.tag: GAL
attributes.value: Royal Botanic Garden Edinburgh
attributes.tag: GAL_sample_id
attributes.value: NOT PROVIDED
attributes.tag: INSDC center name
attributes.value: Tree of Life Programme
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: Minimap2 (version 2.24-r1122)
attributes.tag: Submitter Id
attributes.value: c1b0e189-52ac-4bb1-8b26-78f9fa311c78
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaMDBG (version 0.3)
attributes.tag: barcoding center
attributes.value: ROYAL BOTANIC GARDEN EDINBURGH
attributes.tag: binning parameters
attributes.value: coverage; graph
attributes.tag: binning software
attributes.value: MetaBat (version 2.15); DASTOOL (version 1.1.5)
attributes.tag: broad-scale environmental context
attributes.value: aquatic biome
attributes.tag: collected_by
attributes.value: NATHAN CHRISMAS
attributes.tag: collecting institution
attributes.value: MARINE BIOLOGICAL ASSOCIATION
attributes.tag: collection date
attributes.value: 2022-04-26
attributes.tag: completeness score
attributes.value: 81.01
attributes.tag: completeness software
attributes.value: checkM (version 1.2.2); checkM_DB (release 2015-01-16)
attributes.tag: contamination score
attributes.value: 3.48
attributes.tag: elevation
attributes.value: 67
attributes.tag: environmental medium
attributes.value: adult lichen tissue
attributes.tag: geographic location (country and/or sea)
attributes.value: United Kingdom
attributes.tag: geographic location (latitude)
attributes.value: 57.61
attributes.tag: geographic location (longitude)
attributes.value: -5.32
attributes.tag: geographic location (region and locality)
attributes.value: East Ross & Cromarty | Beinn Eighe NNR, Coille na Glas Leitir
attributes.tag: habitat
attributes.value: Riverbed on Torridonian sandstone
attributes.tag: host life stage
attributes.value: spore-bearing structure
attributes.tag: host scientific name
attributes.value: Ionaspis lacustris
attributes.tag: host sex
attributes.value: other
attributes.tag: host taxid
attributes.value: 196135
attributes.tag: identified_by
attributes.value: NATHAN CHRISMAS | BRIAN COPPINS
attributes.tag: identifier_affiliation
attributes.value: MARINE BIOLOGICAL ASSOCIATION | ROYAL BOTANIC GARDEN EDINBURGH
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: Lichen: Ionaspis lacustris
attributes.tag: local environmental context
attributes.value: freshwater biome
attributes.tag: metagenomic source
attributes.value: lichen metagenome
attributes.tag: number of standard tRNAs extracted
attributes.value: 58
attributes.tag: organism part
attributes.value: WHOLE ORGANISM
attributes.tag: project name
attributes.value: DTOL
attributes.tag: sample collection device or method
attributes.value: Collected into paper packets, dissected under the microscope and flash frozen
attributes.tag: sample derived from
attributes.value: SAMEA117994203
attributes.tag: sample has part
attributes.value: SAMEA114764085
attributes.tag: sample name
attributes.value: c1b0e189-52ac-4bb1-8b26-78f9fa311c78
attributes.tag: scientific_name
attributes.value: Acetobacteraceae bacterium
attributes.tag: sequencing method
attributes.value: Pacbio Sequel II
attributes.tag: specimen_id
attributes.value: EDTOL04854
attributes.tag: specimen_voucher
attributes.value: NOT_PROVIDED
attributes.tag: tRNA extraction software
attributes.value: PROKKA (version 1.14.6)
attributes.tag: taxonomic classification
attributes.value: GTDB-TK (version 2.4.0); GTDB (release 214)
attributes.tag: taxonomic identity marker
attributes.value: taxonomic novelty determined using RED
attributes.tag: tolid
attributes.value: glIonLacu2.Acetobacteraceae_2
attributes.tag: voucher institution url
attributes.value: https://ror.org/0349vqz63