title: bl6_he_he_normal_liver_17_13351_litterC
organism: Mus musculus
description: Protocols: Livers from mice were isolated and flash frozen at -80°C. No diethylnitrosamine treatment was administered to animals Samples were treated as previously described in Omni-ATAC protocol (Corces et al. 2017), with minor modifications to the nuclear isolation steps (in Step 1, 1 ml of 1× homogeniser buffer was used instead of 2 ml; in Step 4, douncing was performed with 30 strokes instead of 20). ATAC-seq was performed as described previously (Corces et al. 2017).
attributes.tag: ENA first public
attributes.value: 2025-05-30
attributes.tag: INSDC center name
attributes.value: MRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: E-MTAB-14144:bl6_he_he_normal_liver_17_13351_litterC
attributes.tag: age
attributes.value: 15
attributes.tag: broker name
attributes.value: ArrayExpress
attributes.tag: collection date
attributes.value: not collected
attributes.tag: common name
attributes.value: house mouse
attributes.tag: developmental stage
attributes.value: P15
attributes.tag: dob
attributes.value: 04/04/17
attributes.tag: genetic modification
attributes.value: B6.Ctcf tm1.1Laat/Ctcf+;Speer6-ps1Tg(Alb-cre)21Mgn
attributes.tag: genotype
attributes.value: CTCF hemizygous
attributes.tag: geographic location (country and/or sea)
attributes.value: not collected
attributes.tag: individual
attributes.value: 17_13351
attributes.tag: isolate
attributes.value: not applicable
attributes.tag: organism part
attributes.value: liver
attributes.tag: parents (mother/father)
attributes.value: 16_27031/16_48413
attributes.tag: sample name
attributes.value: E-MTAB-14144:bl6_he_he_normal_liver_17_13351_litterC
attributes.tag: scientific_name
attributes.value: Mus musculus
attributes.tag: sex
attributes.value: male
attributes.tag: strain
attributes.value: C57BL/6J