title: Rhodococcus enriched genome bin
organism: Rhodococcus sp. (in: high G+C Gram-positive bacteria)
description: Paired end whole genome sequencing reads were generated from a crude oil associated mixed bacterial DNA sample collected in Lucknow, Uttar Pradesh, India. Reads were quality controlled and analyzed using a genome-centric assembly and binning workflow, which recovered a high-GC, Rhodococcus-enriched draft genome contig bin for downstream annotation and functional screening. This BioSample links the raw sequence reads and derived assembly used to assess metabolic potential relevant to hydrocarbon utilization and biosurfactant-linked lipid metabolism.
attributes.tag: isolation_source
attributes.value: crude oil
attributes.tag: collection_date
attributes.value: 2025
attributes.tag: geo_loc_name
attributes.value: India: Lucknow, Uttar Pradesh
attributes.tag: lat_lon
attributes.value: 26.8467 N 80.9462 E
attributes.tag: isolate
attributes.value: LS2
attributes.tag: sample_type
attributes.value: missing
attributes.tag: strain
attributes.value: missing
attributes.tag: metagenomic
attributes.value: 1
attributes.tag: environmental-sample
attributes.value: 1
attributes.tag: sample-type
attributes.value: metagenomic assembly
attributes.tag: metagenome-source
attributes.value: crude oil metagenome
attributes.tag: derived-from-SRA
attributes.value: SRR38172708
attributes.tag: BioSampleModel
attributes.value: Microbe, viral or environmental