title: Metagenome-assembled genome: SRR28262208_binner23_Refined_18
organism: uncultured Massilia sp.
attributes.tag: ENA first public
attributes.value: 2025-08-14
attributes.tag: INSDC center name
attributes.value: EMG
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: SRR28262208_binner23_Refined_18
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaspades_v3.15.5
attributes.tag: binning parameters
attributes.value: default
attributes.tag: binning software
attributes.value: MGnify-genomes-generation-pipeline_v1.0.0
attributes.tag: broad-scale environmental context
attributes.value: soil
attributes.tag: broker name
attributes.value: EBI-EMG
attributes.tag: collection date
attributes.value: 2023-01-15
attributes.tag: completeness score
attributes.value: 86.84
attributes.tag: completeness software
attributes.value: CheckM2_v1.0.1
attributes.tag: contamination score
attributes.value: 2.58
attributes.tag: environmental medium
attributes.value: tomato
attributes.tag: geographic location (country and/or sea)
attributes.value: China
attributes.tag: geographic location (latitude)
attributes.value: 24.58000000
attributes.tag: geographic location (longitude)
attributes.value: 118.10000000
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: rhizosphere metagenome
attributes.tag: local environmental context
attributes.value: rhizosphere
attributes.tag: metagenomic source
attributes.value: rhizosphere metagenome
attributes.tag: project name
attributes.value: We aimed to (1) determine the composition of microbiomes and resistomes in xylem (2) explore the effects of sludge addition on xylem ARG risks, including abundance, mobility, pathogenicity, activity, and accumulation (3) elucidate potential mechanisms behind the shifts in xylem resistomes under sludge addition.
attributes.tag: sample derived from
attributes.value: SAMN40242069
attributes.tag: sample name
attributes.value: SRR28262208_binner23_Refined_18
attributes.tag: scientific_name
attributes.value: uncultured Massilia sp.
attributes.tag: sequencing method
attributes.value: DNBSEQ-T7
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach