title: Metagenome-assembled genome: SRR27822708_concoct_61
organism: uncultured Ktedonobacterales bacterium
attributes.tag: ENA first public
attributes.value: 2025-08-14
attributes.tag: INSDC center name
attributes.value: EMG
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: SRR27822708_concoct_61
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaspades_v3.15.5
attributes.tag: binning parameters
attributes.value: default
attributes.tag: binning software
attributes.value: MGnify-genomes-generation-pipeline_v1.0.0
attributes.tag: broad-scale environmental context
attributes.value: soil
attributes.tag: broker name
attributes.value: EBI-EMG
attributes.tag: collection date
attributes.value: 2023-10
attributes.tag: completeness score
attributes.value: 69.23
attributes.tag: completeness software
attributes.value: CheckM2_v1.0.1
attributes.tag: contamination score
attributes.value: 4.31
attributes.tag: environmental medium
attributes.value: maize
attributes.tag: geographic location (country and/or sea)
attributes.value: China
attributes.tag: geographic location (latitude)
attributes.value: 28.35000000
attributes.tag: geographic location (longitude)
attributes.value: 116.18000000
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: rhizosphere metagenome
attributes.tag: local environmental context
attributes.value: rhizosphere
attributes.tag: metagenomic source
attributes.value: rhizosphere metagenome
attributes.tag: project name
attributes.value: Beneficial interactions between rhizosphere microbes and soil are pivotal for crop fitness. Nevertheless, the principles underlying the assembly of rhizosphere microbiomes across various soils and nutrient status remain elusive. Here, we examined the microbiomes in the rhizosphere and bulk soils of maize grown under three soil types with fertilization for at least 29 years. We conclude that maize selects rhizobacteria based on microbial functional traits beneficial to its own performance not solely on species composition.
attributes.tag: sample derived from
attributes.value: SAMN39711930
attributes.tag: sample name
attributes.value: SRR27822708_concoct_61
attributes.tag: scientific_name
attributes.value: uncultured Ktedonobacterales bacterium
attributes.tag: sequencing method
attributes.value: Illumina NovaSeq 6000
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach