title: Metagenome-assembled genome: DRR127613_bin_19869
organism: Collinsella sp.
attributes.tag: ENA first public
attributes.value: 2026-04-07
attributes.tag: INSDC center name
attributes.value: EMG
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: DRR127613_bin_19869
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaspades_v3.15.5
attributes.tag: binning parameters
attributes.value: default
attributes.tag: binning software
attributes.value: MGnify-genomes-generation-pipeline_v2.0.0
attributes.tag: broad-scale environmental context
attributes.value: human
attributes.tag: broker name
attributes.value: EBI-EMG
attributes.tag: collection date
attributes.value: 2014
attributes.tag: completeness score
attributes.value: 77.64
attributes.tag: completeness software
attributes.value: CheckM2_v1.0.1
attributes.tag: contamination score
attributes.value: 2.67
attributes.tag: environmental medium
attributes.value: intestine
attributes.tag: geographic location (country and/or sea)
attributes.value: Japan
attributes.tag: geographic location (latitude)
attributes.value: 35.66000000
attributes.tag: geographic location (longitude)
attributes.value: 139.21700000
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: human gut metagenome
attributes.tag: local environmental context
attributes.value: digestive system
attributes.tag: metagenomic source
attributes.value: human gut metagenome
attributes.tag: project name
attributes.value: Total microbial community DNA was isolated from the fecal samples of Japanese patients who underwent colonoscopy at National Cancer Research Center. The study population contains health, early and advanced cancer stages.
attributes.tag: sample derived from
attributes.value: SAMD00114859
attributes.tag: sample name
attributes.value: DRR127613_bin_19869
attributes.tag: scientific_name
attributes.value: Collinsella sp.
attributes.tag: sequencing method
attributes.value: None
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach