title: 15088.UMNG1969KSAP0003.R.meta; P-MAPS
organism: human gut metagenome
attributes.tag: ENA first public
attributes.value: 2024-11-08
attributes.tag: External Id
attributes.value: SAMEA114597394
attributes.tag: INSDC center name
attributes.value: UCSDMI
attributes.tag: INSDC last update
attributes.value: 2023-11-09T19:37:01Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_15088:15088.UMNG1969KSAP0003.R.meta
attributes.tag: abdominal_pain_vas
attributes.value: 6
attributes.tag: acute_fluid_collection
attributes.value: no
attributes.tag: acute_necrotic_collection
attributes.value: no
attributes.tag: alcohol_units
attributes.value: 37.5
attributes.tag: antibiotic_treatment_before_enrollment
attributes.value: More than 1 month no antibiotics
attributes.tag: antidiabetics
attributes.value: no
attributes.tag: atlanta
attributes.value: 1
attributes.tag: autism
attributes.value: no
attributes.tag: bisap
attributes.value: not collected
attributes.tag: bowel_intestinal_surgery_in_past
attributes.value: no
attributes.tag: bun_mg_dl
attributes.value: not collected
attributes.tag: ca_mg_dl
attributes.value: not collected
attributes.tag: ca_mmol_l
attributes.value: 2,38
attributes.tag: cardiovascular_disease_in_past
attributes.value: no
attributes.tag: cardiovascular_failure_grade_1
attributes.value: no
attributes.tag: cardiovascular_failure_grade_2
attributes.value: no
attributes.tag: cardiovascular_failure_grade_3
attributes.value: no
attributes.tag: cardiovascular_failure_grade_4
attributes.value: no
attributes.tag: center
attributes.value: UMN
attributes.tag: cholestasis_at_time_of_enrollment
attributes.value: no
attributes.tag: chronic_alcohol_consumption
attributes.value: Chronic alcohol consumption
attributes.tag: chronic_constipation_in_past
attributes.value: no
attributes.tag: chronic_diarrhea_in_past
attributes.value: no
attributes.tag: clostridioides_diff_infection_in_past
attributes.value: no
attributes.tag: collection date
attributes.value: 2021
attributes.tag: collection_device
attributes.value: eSwab
attributes.tag: collection_method
attributes.value: rectal
attributes.tag: collection_timestamp
attributes.value: 2021
attributes.tag: comment1
attributes.value: not collected
attributes.tag: comment2
attributes.value: not collected
attributes.tag: comment3
attributes.value: not collected
attributes.tag: comment4
attributes.value: CRP <3,1mg/l
attributes.tag: confusion_ad_admission
attributes.value: not collected
attributes.tag: confusion_at_admission
attributes.value: not collected
attributes.tag: country
attributes.value: Germany
attributes.tag: crea_mg_dl
attributes.value: 0.55419
attributes.tag: crp_mg_l
attributes.value: not collected
attributes.tag: ct_or_sonographic_drainage
attributes.value: no
attributes.tag: death
attributes.value: no
attributes.tag: dementia_in_past
attributes.value: no
attributes.tag: depression_in_past
attributes.value: yes
attributes.tag: diabetes_mellitus_in_past
attributes.value: no
attributes.tag: diat
attributes.value: omnivour
attributes.tag: dna_extracted
attributes.value: TRUE
attributes.tag: drainage_required
attributes.value: no
attributes.tag: duodenal_obstruction
attributes.value: no
attributes.tag: elevation
attributes.value: 150
attributes.tag: empo_1
attributes.value: Host-associated
attributes.tag: empo_2
attributes.value: Host-associated (non-saline)
attributes.tag: empo_3
attributes.value: Animal (non-saline)
attributes.tag: empo_4
attributes.value: Animal distal gut (non-saline)
attributes.tag: env_biome
attributes.value: urban biome
attributes.tag: env_feature
attributes.value: human-associated habitat
attributes.tag: env_material
attributes.value: intestine environment
attributes.tag: env_package
attributes.value: human-gut
attributes.tag: ercp_with_papillotomy
attributes.value: no
attributes.tag: ercp_with_stent_implantation
attributes.value: no
attributes.tag: ercp_yes
attributes.value: no
attributes.tag: ethic
attributes.value: Caucasian
attributes.tag: etiology
attributes.value: alcohol
attributes.tag: etiology_drugs
attributes.value: not collected
attributes.tag: etiology_other
attributes.value: not collected
attributes.tag: eus_drainage
attributes.value: no
attributes.tag: eus_drainage_with_lams
attributes.value: no
attributes.tag: eus_drainage_with_pigtails
attributes.value: no
attributes.tag: extra_gastrointestinal_cancer_in_past
attributes.value: no
attributes.tag: gastrointestinal_cancer_in_past
attributes.value: no
attributes.tag: geo_loc_name
attributes.value: Germany:Gottingen
attributes.tag: geographic location (country and/or sea)
attributes.value: Germany
attributes.tag: glc_mg_dl
attributes.value: not collected
attributes.tag: grade_of_stool
attributes.value: 0
attributes.tag: haps
attributes.value: not collected
attributes.tag: heart_failure_in_past
attributes.value: yes
attributes.tag: hematologic_cancer_in_past
attributes.value: no
attributes.tag: hematologic_failure
attributes.value: no
attributes.tag: hepatic_failure
attributes.value: no
attributes.tag: hepatitis_in_past
attributes.value: no
attributes.tag: hiv
attributes.value: no
attributes.tag: hkt
attributes.value: 42.9
attributes.tag: host scientific name
attributes.value: Homo sapiens
attributes.tag: host_age
attributes.value: 52
attributes.tag: host_age_units
attributes.value: years
attributes.tag: host_body_habitat
attributes.value: UBERON:gastrointestinal system
attributes.tag: host_body_mass_index
attributes.value: 30.81854043
attributes.tag: host_body_product
attributes.value: UBERON:feces
attributes.tag: host_body_site
attributes.value: UBERON:rectum
attributes.tag: host_common_name
attributes.value: human
attributes.tag: host_height
attributes.value: 156
attributes.tag: host_height_units
attributes.value: cm
attributes.tag: host_subject_id
attributes.value: 362
attributes.tag: host_taxid
attributes.value: 9606
attributes.tag: host_weight
attributes.value: 75
attributes.tag: host_weight_units
attributes.value: kg
attributes.tag: icu_admission
attributes.value: no
attributes.tag: immunosuppressant
attributes.value: no
attributes.tag: infected_collection
attributes.value: no
attributes.tag: inflammatory_bowel_disease
attributes.value: no
attributes.tag: insulin
attributes.value: no
attributes.tag: invasive_ventilation
attributes.value: no
attributes.tag: irb_institute
attributes.value: University medical center Goettingen
attributes.tag: irb_protocol_id
attributes.value: 02807
attributes.tag: irritable_stomach_bowel_disease_in_past
attributes.value: no
attributes.tag: kidney_injury_akin1
attributes.value: no
attributes.tag: kidney_injury_akin2
attributes.value: no
attributes.tag: kidney_injury_akin3
attributes.value: no
attributes.tag: latitude
attributes.value: 51.53
attributes.tag: laxatives
attributes.value: no
attributes.tag: ldh
attributes.value: 363
attributes.tag: length_of_hospital_stay
attributes.value: 2
attributes.tag: length_of_hospital_stay_binned
attributes.value: short
attributes.tag: leuk_10_3_ml
attributes.value: 10.9
attributes.tag: life_stage
attributes.value: not collected
attributes.tag: liver_cirrhosis_in_past
attributes.value: no
attributes.tag: longitude
attributes.value: 9.93
attributes.tag: mestenterial_thrombosis
attributes.value: no
attributes.tag: metformin
attributes.value: no
attributes.tag: nafld
attributes.value: no
attributes.tag: necrosis
attributes.value: no
attributes.tag: neuroleptics
attributes.value: no
attributes.tag: neurologic_failure
attributes.value: no
attributes.tag: nicotine_consumption
attributes.value: >10 cigarettes/day
attributes.tag: no_complication
attributes.value: yes
attributes.tag: no_food_intake_possible_for_24h
attributes.value: not collected
attributes.tag: no_previous_medication
attributes.value: no
attributes.tag: non_invasive_ventilation
attributes.value: no
attributes.tag: nsaid
attributes.value: no
attributes.tag: number_of_opioid_application
attributes.value: not collected
attributes.tag: opioid_dose
attributes.value: not collected
attributes.tag: opioid_intake
attributes.value: no
attributes.tag: opioid_name
attributes.value: not collected
attributes.tag: origin
attributes.value: not collected
attributes.tag: other_abdominal_surgery
attributes.value: no
attributes.tag: other_antidiabetics
attributes.value: no
attributes.tag: other_gastrointestinal_diseases_in_past
attributes.value: no
attributes.tag: other_neurological_disease
attributes.value: no
attributes.tag: other_organ_failure
attributes.value: no
attributes.tag: paracetamol
attributes.value: no
attributes.tag: parkinson_in_past
attributes.value: no
attributes.tag: perotinitis
attributes.value: not collected
attributes.tag: physical_specimen_location
attributes.value: U Gottingen
attributes.tag: physical_specimen_remaining
attributes.value: FALSE
attributes.tag: pleural_effusion
attributes.value: not collected
attributes.tag: pm_none
attributes.value: yes
attributes.tag: ppi
attributes.value: no
attributes.tag: pseudocyst
attributes.value: no
attributes.tag: qiita_sample_type
attributes.value: rectal swab
attributes.tag: respiratory_failure_grade_1
attributes.value: no
attributes.tag: respiratory_failure_grade_2
attributes.value: no
attributes.tag: respiratory_failure_grade_3
attributes.value: no
attributes.tag: respiratory_failure_grade_4
attributes.value: no
attributes.tag: rheumatic_disease_in_past
attributes.value: no
attributes.tag: sample name
attributes.value: qiita_sid_15088:15088.UMNG1969KSAP0003.R.meta
attributes.tag: sample_type
attributes.value: rectal swab
attributes.tag: scientific_name
attributes.value: human gut metagenome
attributes.tag: sequencing
attributes.value: not collected
attributes.tag: severity
attributes.value: mild
attributes.tag: sex
attributes.value: male
attributes.tag: sirs
attributes.value: 0
attributes.tag: specific_current_antibiotics
attributes.value: not collected
attributes.tag: specific_previous_week_antibiotics
attributes.value: not collected
attributes.tag: statines
attributes.value: no
attributes.tag: tag_mg_dl
attributes.value: not collected
attributes.tag: time_pain_hosp
attributes.value: 12-24h
attributes.tag: true_control
attributes.value: TRUE
attributes.tag: tube_id
attributes.value: P-MAPS_UMNG1969KSAP0003_R_meta
attributes.tag: walled_off_necrosis
attributes.value: no
attributes.tag: year
attributes.value: 2021