title: 90739775-fe44-4546-96ee-69cdeb6d9d85-asg-MAGScoT_cleanbin_000001
organism: Candidatus Endoriftia persephone
attributes.tag: 16S recovered
attributes.value: Yes
attributes.tag: 16S recovery software
attributes.value: PROKKA (version 1.14.6)
attributes.tag: ENA first public
attributes.value: 2025-04-17
attributes.tag: GAL
attributes.value: Queen Mary University of London
attributes.tag: GAL_sample_id
attributes.value: NOT PROVIDED
attributes.tag: INSDC center name
attributes.value: Tree of Life Programme
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: Minimap2 (version 2.24-r1122)
attributes.tag: Submitter Id
attributes.value: 90739775-fe44-4546-96ee-69cdeb6d9d85
attributes.tag: assembly quality
attributes.value: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
attributes.tag: assembly software
attributes.value: metaMDBG (version 0.3)
attributes.tag: barcoding center
attributes.value: NOT PROVIDED
attributes.tag: binning parameters
attributes.value: coverage; graph
attributes.tag: binning software
attributes.value: MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
attributes.tag: broad-scale environmental context
attributes.value: aquatic biome
attributes.tag: collected_by
attributes.value: ROBERT VRIJENHOEK
attributes.tag: collecting institution
attributes.value: MONTEREY BAY AQUARIUM RESEARCH INSTITUTE
attributes.tag: collection date
attributes.value: 2000-08-14
attributes.tag: completeness score
attributes.value: 98.89
attributes.tag: completeness software
attributes.value: checkM (version 1.2.2); checkM_DB (release 2015-01-16)
attributes.tag: contamination score
attributes.value: 1.74
attributes.tag: depth
attributes.value: 3311
attributes.tag: environmental medium
attributes.value: adult annelid tissue
attributes.tag: geographic location (country and/or sea)
attributes.value: USA
attributes.tag: geographic location (latitude)
attributes.value: 41.00
attributes.tag: geographic location (longitude)
attributes.value: -127.49
attributes.tag: geographic location (region and locality)
attributes.value: Pacific Ocean off northern California | Gorda Ridge | NESCA Northern Escanaba Trough site
attributes.tag: habitat
attributes.value: hydrothermal vent
attributes.tag: host life stage
attributes.value: not collected
attributes.tag: host scientific name
attributes.value: Ridgeia piscesae
attributes.tag: host sex
attributes.value: not collected
attributes.tag: host taxid
attributes.value: 27915
attributes.tag: identified_by
attributes.value: ROBERT VRIJENHOEK
attributes.tag: identifier_affiliation
attributes.value: MONTEREY BAY AQUARIUM RESEARCH INSTITUTE
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: Annelid: Ridgeia piscesae
attributes.tag: local environmental context
attributes.value: marine biome
attributes.tag: metagenomic source
attributes.value: annelid metagenome
attributes.tag: number of standard tRNAs extracted
attributes.value: 49
attributes.tag: organism part
attributes.value: WHOLE ORGANISM
attributes.tag: project name
attributes.value: ASG
attributes.tag: proxy voucher
attributes.value: SIO:BIC:A11988
attributes.tag: proxy voucher url
attributes.value: https://sioapps.ucsd.edu/collections/bi/catalog/A11988/
attributes.tag: sample collection device or method
attributes.value: collected by the Remotely Operated Vehicle Tiburon
attributes.tag: sample derived from
attributes.value: SAMEA118013055
attributes.tag: sample name
attributes.value: 90739775-fe44-4546-96ee-69cdeb6d9d85
attributes.tag: scientific_name
attributes.value: Candidatus Endoriftia persephone
attributes.tag: sequencing method
attributes.value: Pacbio Sequel II
attributes.tag: specimen_id
attributes.value: QMOUL0000255
attributes.tag: specimen_voucher
attributes.value: NOT_APPLICABLE
attributes.tag: tRNA extraction software
attributes.value: PROKKA (version 1.14.6)
attributes.tag: taxonomic classification
attributes.value: GTDB-TK (version 2.4.0); GTDB (release 214)
attributes.tag: taxonomic identity marker
attributes.value: ani_screen
attributes.tag: tolid
attributes.value: wsRidPisc1.Endoriftia_persephone_1
attributes.tag: voucher institution url
attributes.value: https://ror.org/04v7hvq31