title: Candidatus Midichloria mitochondrii Ir_f12 MAG
organism: Candidatus Midichloria mitochondrii
attributes.tag: ENA first public
attributes.value: 2025-12-08
attributes.tag: External Id
attributes.value: SAMEA114858558
attributes.tag: INSDC center name
attributes.value: National Institute of Public Health and Environment (RIVM)
attributes.tag: INSDC last update
attributes.value: 2023-12-08T14:09:12Z
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: Ir_f12_Mm
attributes.tag: assembly quality
attributes.value: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
attributes.tag: assembly software
attributes.value: Flye 2.9-b1768 , Polypolish v0.5.0
attributes.tag: binning parameters
attributes.value: N/A
attributes.tag: binning software
attributes.value: Tick holobiome metagenomic reads were filtered using reference genome GCA_000219355.1, mapped reads were then assembled
attributes.tag: broad-scale environmental context
attributes.value: forest biome
attributes.tag: collection date
attributes.value: 2022-03-23
attributes.tag: completeness score
attributes.value: 100
attributes.tag: completeness software
attributes.value: checkm
attributes.tag: contamination score
attributes.value: 0
attributes.tag: environmental medium
attributes.value: Arthropoda
attributes.tag: geographic location (country and/or sea)
attributes.value: Netherlands
attributes.tag: geographic location (latitude)
attributes.value: 51.9769444
attributes.tag: geographic location (longitude)
attributes.value: 5.69922
attributes.tag: isolation_source
attributes.value: Ixodes ricinus
attributes.tag: local environmental context
attributes.value: planted forest
attributes.tag: metagenomic source
attributes.value: tick metagenome
attributes.tag: project name
attributes.value: Comparative genomics of pathogenic Rickettsial symbionts in ticks
attributes.tag: sample derived from
attributes.value: ERS17138684
attributes.tag: sample name
attributes.value: Ir_f12_Mm
attributes.tag: scientific_name
attributes.value: Candidatus Midichloria mitochondrii
attributes.tag: taxonomic identity marker
attributes.value: Whole genome