title: binned_metagenome: 13_bin1_IDBA_re-assembly_contigs
organism: Rubrivivax sp.
description: This sample represents a binned_metagenome assembled from the metagenomic runs ERR16864535,ERR16864536,ERR16864537,ERR16864538,ERR16864540,ERR16864541,ERR16867701,ERR16867705,ERR16873709,ERR16873712,ERR16876715 of study ERP190897.
attributes.tag: ENA first public
attributes.value: 2026-04-14
attributes.tag: INSDC center name
attributes.value: LVBMC
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: 13_bin1_IDBA_re-assembly_contigs
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaSPAdes_v.4.0.0
attributes.tag: binning parameters
attributes.value: default
attributes.tag: binning software
attributes.value: BASALT_v1.1.0
attributes.tag: broad-scale environmental context
attributes.value: marine biome
attributes.tag: collection date
attributes.value: 2025-07-02
attributes.tag: completeness score
attributes.value: 20.69
attributes.tag: completeness software
attributes.value: CheckM2_v1.0.1
attributes.tag: contamination score
attributes.value: 2.59
attributes.tag: environmental medium
attributes.value: water
attributes.tag: geographic location (country and/or sea)
attributes.value: Latvia
attributes.tag: geographic location (latitude)
attributes.value: not provided
attributes.tag: geographic location (longitude)
attributes.value: not provided
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: marine metagenome
attributes.tag: local environmental context
attributes.value: marine surface water
attributes.tag: metagenomic source
attributes.value: marine metagenome
attributes.tag: project name
attributes.value: Marine metagenomic library of Baltic Sea from three distinct locations collected during the period from August to November 2025 in Latvia
attributes.tag: sample derived from
attributes.value: SAMEA121975237,SAMEA121975238,SAMEA121975239,SAMEA121975240,SAMEA121975241,SAMEA121975242,SAMEA121975243,SAMEA121975244,SAMEA121975245,SAMEA121975246,SAMEA121975247
attributes.tag: sample name
attributes.value: 13_bin1_IDBA_re-assembly_contigs
attributes.tag: scientific_name
attributes.value: Rubrivivax sp.
attributes.tag: sequencing method
attributes.value: DNBSEQ-G400
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach