organism: human gut metagenome
attributes.tag: host
attributes.value: Homo sapiens
attributes.tag: collection_date
attributes.value: 2022-09-08
attributes.tag: geo_loc_name
attributes.value: Puerto Rico: San Juan
attributes.tag: env_broad_scale
attributes.value: human-associated habitat
attributes.tag: env_local_scale
attributes.value: human gastrointestinal tract
attributes.tag: env_medium
attributes.value: feces
attributes.tag: lat_lon
attributes.value: 18.4655 N 66.1057 W
attributes.tag: patient_id
attributes.value: PR1002
attributes.tag: Age
attributes.value: 30.2
attributes.tag: Age_Cat
attributes.value: Age 21-30
attributes.tag: Sex
attributes.value: female
attributes.tag: BMI
attributes.value: 20.90047871
attributes.tag: BMI_cat
attributes.value: Normal Weight
attributes.tag: basicinfo_zipcode
attributes.value: 924
attributes.tag: maritalstatus
attributes.value: Single
attributes.tag: income
attributes.value: Less than $20,000
attributes.tag: smoker
attributes.value: Nonsmoker
attributes.tag: education
attributes.value: Baccalaureate
attributes.tag: job
attributes.value: Full time job
attributes.tag: race
attributes.value: White
attributes.tag: Alcohol
attributes.value: 0
attributes.tag: Animal.Protein
attributes.value: 60.18766667
attributes.tag: Total.Added.Sugars
attributes.value: 34.47266667
attributes.tag: Added.Sugars.by.Available.Carbohydrate
attributes.value: 45.088
attributes.tag: Caffeine
attributes.value: 0
attributes.tag: Cholesterol
attributes.value: 391.4763333
attributes.tag: Total.Dietary.Fiber
attributes.value: 10.278
attributes.tag: Total.Fat
attributes.value: 84.76666667
attributes.tag: Insoluble.Dietary.Fiber
attributes.value: 5.383666667
attributes.tag: Energy
attributes.value: 1838.294333
attributes.tag: Total.Monounsaturated.Fatty.Acids
attributes.value: 26.213
attributes.tag: Omega.3.Fatty.Acids
attributes.value: 1.241333333
attributes.tag: percent_calories_from_alcohol
attributes.value: 0
attributes.tag: percent_calories_from_carbohydrates
attributes.value: 41.79066667
attributes.tag: percent_calories_from_fat
attributes.value: 40.41766667
attributes.tag: percent_calories_from_MUFA
attributes.value: 12.48433333
attributes.tag: percent_calories_from_PUFA
attributes.value: 5.239666667
attributes.tag: percent_calories_from_protein
attributes.value: 17.74966667
attributes.tag: percent_calories_from_SFA
attributes.value: 17.84033333
attributes.tag: Total.Polyunsaturated.Fatty.Acids
attributes.value: 10.81133333
attributes.tag: Total.Protein
attributes.value: 79.86733333
attributes.tag: Total.Saturated.Fatty.Acids
attributes.value: 37.48933333
attributes.tag: Total.Carbohydrate
attributes.value: 191.0483333
attributes.tag: Total.Sugars
attributes.value: 62.13633333
attributes.tag: Vegetable.Protein
attributes.value: 19.67966667
attributes.tag: Soluble.Dietary.Fiber
attributes.value: 4.884666667
attributes.tag: CRP_mg_L
attributes.value: 1.73774881
attributes.tag: Fecal_calprotectin_mg_g
attributes.value: 382.24
attributes.tag: log_fecal_calpro
attributes.value: 5.948661425
attributes.tag: logCRP
attributes.value: 0.552590488
attributes.tag: log_sCDAI
attributes.value: 4.905274778
attributes.tag: CRP_inflammation_cat
attributes.value: Normal_CRP
attributes.tag: FC_inflammation_cat
attributes.value: Active_FC
attributes.tag: sCDAI
attributes.value: 135
attributes.tag: stool_score
attributes.value: 58
attributes.tag: pain_score
attributes.value: 5
attributes.tag: wellbeing_score
attributes.value: 28
attributes.tag: sCDAI_interpretation
attributes.value: Remission
attributes.tag: sIBDQ
attributes.value: 36
attributes.tag: Systemic_score
attributes.value: 7
attributes.tag: Social_score
attributes.value: 11
attributes.tag: Bowel_score
attributes.value: 7
attributes.tag: Emotional_score
attributes.value: 11
attributes.tag: sIBDQ_interpretation
attributes.value: Severely impaired
attributes.tag: Fatigue
attributes.value: 58.5
attributes.tag: Fatigue_interpretation
attributes.value: Mild
attributes.tag: Sleep_disturbance
attributes.value: 52.4
attributes.tag: Sleep_interpretation
attributes.value: Within normal limits
attributes.tag: Social_isolation
attributes.value: 57.5
attributes.tag: Isolation_interpretation
attributes.value: Mild
attributes.tag: Ability_to_participate
attributes.value: 46
attributes.tag: APS_interpretation
attributes.value: Within normal limits
attributes.tag: Anxiety
attributes.value: 3
attributes.tag: Anxiety_interpretation
attributes.value: None-minimal
attributes.tag: Depression
attributes.value: 7
attributes.tag: PHQ_interpretation
attributes.value: Mild
attributes.tag: MR1
attributes.value: -0.52569863
attributes.tag: MR3
attributes.value: -0.236802639
attributes.tag: MR2
attributes.value: 0.415128395
attributes.tag: MR4
attributes.value: -0.6509346
attributes.tag: aminosalicylates
attributes.value: No
attributes.tag: corticosteroids
attributes.value: No
attributes.tag: inmunomodulators
attributes.value: No
attributes.tag: Anti_TNF
attributes.value: No
attributes.tag: Vedolizumab
attributes.value: No
attributes.tag: Ustekinumab
attributes.value: Stelara
attributes.tag: probiotics
attributes.value: No
attributes.tag: vitamins_supplements
attributes.value: Si, Â C
attributes.tag: noIBD_meds
attributes.value: Â Imodium
attributes.tag: antibiotics
attributes.value: No
attributes.tag: IBDmeds_non_biologics
attributes.value: No
attributes.tag: IBDmeds_biologics
attributes.value: Yes
attributes.tag: noIBD_meds_bin
attributes.value: Yes
attributes.tag: HEI2015Vegetables
attributes.value: 1.699121186
attributes.tag: HEI2015GreensAndBeans
attributes.value: 3.399890805
attributes.tag: HEI2015TotalFruit
attributes.value: 1.086265112
attributes.tag: HEI2015WholeFruit
attributes.value: 1.038099992
attributes.tag: HEI2015WholeGrains
attributes.value: 2.83837995
attributes.tag: HEI2015Dairy
attributes.value: 5.954516449
attributes.tag: HEI2015ProteinFoods
attributes.value: 5
attributes.tag: HEI2015SeafoodPlantProtein
attributes.value: 0
attributes.tag: HEI2015FattyAcid
attributes.value: 0
attributes.tag: HEI2015Sodium
attributes.value: 2.538951819
attributes.tag: HEI2015RefinedGrains
attributes.value: 1.370108414
attributes.tag: HEI2015AddedSugars
attributes.value: 9.486660844
attributes.tag: HEI2015SatFats
attributes.value: 0
attributes.tag: HEI2015TotalScore
attributes.value: 34.41199457
attributes.tag: AHEI_Vegetables
attributes.value: 2.748666666
attributes.tag: AHEI_Fruits
attributes.value: 0.763333333
attributes.tag: AHEI_WholeGrains
attributes.value: 2.958427823
attributes.tag: AHEI_LongChainFats
attributes.value: 2.14666668
attributes.tag: AHEI_SugarSweetenedBeverages.FruitJuices
attributes.value: 0
attributes.tag: AHEI_NutsLegumes
attributes.value: 0
attributes.tag: AHEI_RedMeats
attributes.value: 0
attributes.tag: AHEI_TransFats
attributes.value: 10
attributes.tag: AHEI_PUFAs
attributes.value: 4.049583334
attributes.tag: AHEI_Sodium
attributes.value: 6.666666667
attributes.tag: AHEI_Alcohol
attributes.value: 10
attributes.tag: AHEI10TotalScore
attributes.value: 39.3333445
attributes.tag: observed
attributes.value: 21
attributes.tag: shannon
attributes.value: 2.056924864
attributes.tag: simpson
attributes.value: 0.80112185
attributes.tag: shannon_boxcox
attributes.value: 1.615469948
attributes.tag: simpson_boxcox
attributes.value: -0.179101891
attributes.tag: EGF_pg_ml
attributes.value: 810.64
attributes.tag: Eotaxin_pg_ml
attributes.value: 55.66
attributes.tag: FGF_2_pg_ml
attributes.value: 684.2
attributes.tag: FLT_3L_pg_ml
attributes.value: 5.38
attributes.tag: Fractalkine_pg_ml
attributes.value: 367.3
attributes.tag: G_CSF_pg_ml
attributes.value: 56.7
attributes.tag: GM_CSF_pg_ml
attributes.value: 120.71
attributes.tag: GROa_pg_ml
attributes.value: 385.91
attributes.tag: IFNa2_pg_ml
attributes.value: 103.4
attributes.tag: IFNy_pg_ml
attributes.value: 40.57
attributes.tag: IL_1a_pg_ml
attributes.value: 1921.14
attributes.tag: IL_1b_pg_ml
attributes.value: 103.05
attributes.tag: IL_1RA_pg_ml
attributes.value: 453.68
attributes.tag: IL_2_pg_ml
attributes.value: 9.47
attributes.tag: IL_3_pg_ml
attributes.value: 0.74
attributes.tag: IL_4_pg_ml
attributes.value: 4.83
attributes.tag: IL_5_pg_ml
attributes.value: 0.47
attributes.tag: IL_6_pg_ml
attributes.value: 79.86
attributes.tag: IL_7_pg_ml
attributes.value: 16.59
attributes.tag: IL_8_pg_ml
attributes.value: 9581.93
attributes.tag: IL_9_pg_ml
attributes.value: 23.1
attributes.tag: IL_10_pg_ml
attributes.value: 12.43
attributes.tag: IL_12p40_pg_ml
attributes.value: 344.15
attributes.tag: IL_12p70_pg_ml
attributes.value: 13.55
attributes.tag: IL_13_pg_ml
attributes.value: 305.09
attributes.tag: IL_15_pg_ml
attributes.value: 85.65
attributes.tag: IL_17A_pg_ml
attributes.value: 135.88
attributes.tag: IL_17E_IL_25_pg_ml
attributes.value: 2511.62
attributes.tag: IL_17F_pg_ml
attributes.value: 32.27
attributes.tag: IL_18_pg_ml
attributes.value: 120.29
attributes.tag: IL_22_pg_ml
attributes.value: 564.3
attributes.tag: IL_27_pg_ml
attributes.value: 1045.04
attributes.tag: IP_10_pg_ml
attributes.value: 525.2
attributes.tag: M_CSF_pg_ml
attributes.value: 166.26
attributes.tag: MCP_1_pg_ml
attributes.value: 1310.19
attributes.tag: MCP_3_pg_ml
attributes.value: 582.69
attributes.tag: MDC_pg_ml
attributes.value: 468.69
attributes.tag: MIG_CXCL9_pg_ml
attributes.value: 5737.27
attributes.tag: MIP_1a_pg_ml
attributes.value: 68.34
attributes.tag: MIP_1b_pg_ml
attributes.value: 61.69
attributes.tag: PDGF_AA_pg_ml
attributes.value: 3719.5
attributes.tag: PDGF_AB_BB_pg_ml
attributes.value: 12378.99
attributes.tag: RANTES_pg_ml
attributes.value: 1314.33
attributes.tag: sCD40L_pg_ml
attributes.value: 2799.18
attributes.tag: TGFa_pg_ml
attributes.value: 51.04
attributes.tag: TNFa_pg_ml
attributes.value: 56.83
attributes.tag: TNFb_pg_ml
attributes.value: 50.64
attributes.tag: VEGF_A_pg_ml
attributes.value: 409.73
attributes.tag: X6CKine_pg_ml
attributes.value: 883.37
attributes.tag: APRIL_pg_ml
attributes.value: 2607.74
attributes.tag: BAFF_pg_ml
attributes.value: 3192
attributes.tag: BCA_1_pg_ml
attributes.value: 79.25
attributes.tag: CCL28_pg_ml
attributes.value: 2712.15
attributes.tag: CTACK_pg_ml
attributes.value: 659.48
attributes.tag: CXCL16_pg_ml
attributes.value: 5164.02
attributes.tag: ENA_78_pg_ml
attributes.value: 418.38
attributes.tag: Eotaxin_2_pg_ml
attributes.value: 480.61
attributes.tag: Eotaxin_3_pg_ml
attributes.value: 65.25
attributes.tag: GCP_2_pg_ml
attributes.value: 136.97
attributes.tag: Granzyme_A_pg_ml
attributes.value: 187.01
attributes.tag: Granzyme_B_pg_ml
attributes.value: 18.92
attributes.tag: HMGB1_pg_ml
attributes.value: 6274.95
attributes.tag: I_309_pg_ml
attributes.value: 83.62
attributes.tag: I_TAC_pg_ml
attributes.value: 309.42
attributes.tag: IFNb_pg_ml
attributes.value: 24.72
attributes.tag: IFNw_pg_ml
attributes.value: 10.26
attributes.tag: IL_11_pg_ml
attributes.value: 3.04
attributes.tag: IL_16_pg_ml
attributes.value: 862.41
attributes.tag: IL_20_pg_ml
attributes.value: 55.66
attributes.tag: IL_21_pg_ml
attributes.value: 22.29
attributes.tag: IL_23_pg_ml
attributes.value: 4189.69
attributes.tag: IL_24_pg_ml
attributes.value: 78.97
attributes.tag: IL_28A_pg_ml
attributes.value: 16.87
attributes.tag: IL_29_pg_ml
attributes.value: 0
attributes.tag: IL_31_pg_ml
attributes.value: 29.66
attributes.tag: IL_33_pg_ml
attributes.value: 14.76
attributes.tag: IL_34_pg_ml
attributes.value: 33.96
attributes.tag: IL_35_pg_ml
attributes.value: 647.43
attributes.tag: LIF_pg_ml
attributes.value: 2.45
attributes.tag: Lymphotactin_pg_ml
attributes.value: 50.91
attributes.tag: MCP_2_pg_ml
attributes.value: 39.28
attributes.tag: MCP_4_pg_ml
attributes.value: 92.15
attributes.tag: MIP_1d_pg_ml
attributes.value: 2108.98
attributes.tag: MIP_3a_pg_ml
attributes.value: 44.51
attributes.tag: MIP_3b_pg_ml
attributes.value: 72.29
attributes.tag: MPIF_1_pg_ml
attributes.value: 198.22
attributes.tag: Perforin_pg_ml
attributes.value: 10347.08
attributes.tag: sCD137_pg_ml
attributes.value: 15.55
attributes.tag: SCF_pg_ml
attributes.value: 544.59
attributes.tag: SDF_1_pg_ml
attributes.value: 3812.51
attributes.tag: sFas_ng_ml
attributes.value: 54.03
attributes.tag: sFasL_pg_ml
attributes.value: 948.87
attributes.tag: TARC_pg_ml
attributes.value: 30.53
attributes.tag: TPO_pg_ml
attributes.value: 103.55
attributes.tag: TRAIL_pg_ml
attributes.value: 27.64
attributes.tag: TSLP_pg_ml
attributes.value: 1.47
attributes.tag: BioSampleModel
attributes.value: MIMS.me
attributes.tag: BioSampleModel
attributes.value: MIGS/MIMS/MIMARKS.human-gut