title: MAG from sample FBB02.1
organism: Polaribacter sp.
description: MAG from water sample of Sana Beach, Banyuls sur Mer (France) collected on 2022-07-05 in a water depth of 1 m (bulk water fraction filtered on 0.22 um).
attributes.tag: 16S recovery software
attributes.value: infernal v1.1.5, Rfam 15.0
attributes.tag: 16s recovered
attributes.value: No
attributes.tag: ENA first public
attributes.value: 2025-08-01
attributes.tag: INSDC center name
attributes.value: Uni Bremen
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2 v2.5.4
attributes.tag: Submitter Id
attributes.value: AGTU_28_bin_33_orig
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics.
attributes.tag: assembly software
attributes.value: SPAdes v4.0.0
attributes.tag: binning parameters
attributes.value: differential coverage, tetranucleotide frequency
attributes.tag: binning software
attributes.value: concoct v1.1.0, metabat2 v2.17, semibin2 v2.2.0, vamb v5.0.4
attributes.tag: broad-scale environmental context
attributes.value: marine biome [ENVO:00000447]
attributes.tag: collection date
attributes.value: 2005-07-22
attributes.tag: completeness score
attributes.value: 92.87
attributes.tag: completeness software
attributes.value: checkm2 v1.1.0
attributes.tag: contamination score
attributes.value: 0.1
attributes.tag: environmental medium
attributes.value: saline water [ENVO:00002010]
attributes.tag: geographic location (country and/or sea)
attributes.value: France
attributes.tag: geographic location (latitude)
attributes.value: 42.48212
attributes.tag: geographic location (longitude)
attributes.value: 3.12748
attributes.tag: isolation_source
attributes.value: marine water
attributes.tag: local environmental context
attributes.value: sandy beach [ENVO:00002199]
attributes.tag: metagenomic source
attributes.value: marine plankton metagenome
attributes.tag: number of standard tRNAs extracted
attributes.value: 29
attributes.tag: project name
attributes.value: Investigation of environmental disturbances on microbial communities in coastal environments
attributes.tag: reassembly post binning
attributes.value: No
attributes.tag: sample derived from
attributes.value: ERR15116709
attributes.tag: sample name
attributes.value: AGTU_28_bin_33_orig
attributes.tag: scientific_name
attributes.value: Polaribacter sp.
attributes.tag: tRNA extraction software
attributes.value: tRNAscan-SE 2.0
attributes.tag: taxonomic classification
attributes.value: gtdbtk v2.4.1, Genome Taxonomy Database R226
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach