title: Microbiome composition in response to serine/glycine deficiency under high-fat diet; 13493.MetabolicCages.LFDnoSG.71
organism: mouse gut metagenome
description: mouse feces
attributes.tag: ENA first public
attributes.value: 2026-02-24
attributes.tag: INSDC center name
attributes.value: UCSDMI
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_13493:13493.MetabolicCages.LFDnoSG.71
attributes.tag: additional_treatments
attributes.value: D2O administration: 27 ul/g mouse body weight of 0.9% NaCl in D2O followed by 6% D2O drinking water for 18 hrs
attributes.tag: anonymized_name
attributes.value: 71
attributes.tag: cage_number
attributes.value: MetabolicCages_5
attributes.tag: cohort
attributes.value: Metabolic Cages
attributes.tag: collection date
attributes.value: 2020-03-31
attributes.tag: collection_date
attributes.value: 2020-03-31
attributes.tag: collection_timestamp
attributes.value: 2020-03-31 6:00
attributes.tag: country
attributes.value: USA
attributes.tag: d2o
attributes.value: D2O labeled
attributes.tag: diet
attributes.value: LFD-SG
attributes.tag: dna_extracted
attributes.value: TRUE
attributes.tag: elevation
attributes.value: 193
attributes.tag: empo_1
attributes.value: Host-associated
attributes.tag: empo_2
attributes.value: Animal-associated
attributes.tag: empo_3
attributes.value: Animal distal gut
attributes.tag: env_biome
attributes.value: urban biome
attributes.tag: env_feature
attributes.value: animal-associated habitat
attributes.tag: env_material
attributes.value: feces
attributes.tag: env_package
attributes.value: host-associated
attributes.tag: geo_loc_name
attributes.value: USA:CA:San Diego
attributes.tag: geographic location (country and/or sea)
attributes.value: USA
attributes.tag: host_age
attributes.value: 26
attributes.tag: host_age_units
attributes.value: weeks
attributes.tag: host_body_habitat
attributes.value: UBERON:feces
attributes.tag: host_body_product
attributes.value: UBERON:feces
attributes.tag: host_body_site
attributes.value: UBERON:feces
attributes.tag: host_common_name
attributes.value: mouse
attributes.tag: host_fasting_blood_glucose
attributes.value: 80
attributes.tag: host_fasting_blood_glucose_units
attributes.value: mg/dl
attributes.tag: host_fat_mass
attributes.value: 3.91
attributes.tag: host_fat_mass_units
attributes.value: g
attributes.tag: host_lean_mass
attributes.value: 23.55
attributes.tag: host_lean_mass_units
attributes.value: g
attributes.tag: host_life_stage
attributes.value: adult
attributes.tag: host_percent_body_weight_gain_of_baseline
attributes.value: 25.630252100840337
attributes.tag: host_percent_fat
attributes.value: 13.299319727891156
attributes.tag: host_plasma_alanine_um
attributes.value: not collected
attributes.tag: host_plasma_aspartate_um
attributes.value: not collected
attributes.tag: host_plasma_glutamate_um
attributes.value: not collected
attributes.tag: host_plasma_glycine_um
attributes.value: not collected
attributes.tag: host_plasma_histidine_um
attributes.value: not collected
attributes.tag: host_plasma_isoleucine_um
attributes.value: not collected
attributes.tag: host_plasma_leucine_um
attributes.value: not collected
attributes.tag: host_plasma_lysine_um
attributes.value: not collected
attributes.tag: host_plasma_methionine_um
attributes.value: not collected
attributes.tag: host_plasma_phenylalanine_um
attributes.value: not collected
attributes.tag: host_plasma_proline_um
attributes.value: not collected
attributes.tag: host_plasma_serine_um
attributes.value: not collected
attributes.tag: host_plasma_threonine_um
attributes.value: not collected
attributes.tag: host_plasma_tyrosine_um
attributes.value: not collected
attributes.tag: host_plasma_valine_um
attributes.value: not collected
attributes.tag: host_scientific_name
attributes.value: Mus musculus
attributes.tag: host_sex
attributes.value: male
attributes.tag: host_subject_id
attributes.value: 71
attributes.tag: host_taxid
attributes.value: 10090
attributes.tag: host_thermal_latency
attributes.value: not collected
attributes.tag: host_thermal_latency_units
attributes.value: not provided
attributes.tag: host_weight
attributes.value: 29.9
attributes.tag: host_weight_units
attributes.value: g
attributes.tag: latitude
attributes.value: 32.5
attributes.tag: longitude
attributes.value: -117.25
attributes.tag: physical_specimen_location
attributes.value: TSRI
attributes.tag: physical_specimen_remaining
attributes.value: TRUE
attributes.tag: qiita_sample_type
attributes.value: feces
attributes.tag: sample name
attributes.value: qiita_sid_13493:13493.MetabolicCages.LFDnoSG.71
attributes.tag: sample_number
attributes.value: 71
attributes.tag: sample_type
attributes.value: feces
attributes.tag: scientific_name
attributes.value: mouse gut metagenome
attributes.tag: weeks_diet
attributes.value: 18