organism: human gut metagenome
attributes.tag: host
attributes.value: Homo sapiens
attributes.tag: collection_date
attributes.value: 2023-10-18
attributes.tag: geo_loc_name
attributes.value: Puerto Rico: San Juan
attributes.tag: env_broad_scale
attributes.value: human-associated habitat
attributes.tag: env_local_scale
attributes.value: human gastrointestinal tract
attributes.tag: env_medium
attributes.value: feces
attributes.tag: lat_lon
attributes.value: 18.4655 N 66.1057 W
attributes.tag: patient_id
attributes.value: PR1057
attributes.tag: Age
attributes.value: 62
attributes.tag: Age_Cat
attributes.value: Age 41-65
attributes.tag: Sex
attributes.value: female
attributes.tag: BMI
attributes.value: 24.20798898
attributes.tag: BMI_cat
attributes.value: Normal Weight
attributes.tag: basicinfo_zipcode
attributes.value: 956
attributes.tag: maritalstatus
attributes.value: Living with a partner
attributes.tag: income
attributes.value: Less than $20,000
attributes.tag: smoker
attributes.value: Ex-smoker
attributes.tag: education
attributes.value: High School
attributes.tag: job
attributes.value: Disabled/unable to work
attributes.tag: race
attributes.value: Other
attributes.tag: Alcohol
attributes.value: 0
attributes.tag: Animal.Protein
attributes.value: 56.07933333
attributes.tag: Total.Added.Sugars
attributes.value: 6.886333333
attributes.tag: Added.Sugars.by.Available.Carbohydrate
attributes.value: 7.658666667
attributes.tag: Caffeine
attributes.value: 110.5066667
attributes.tag: Cholesterol
attributes.value: 282.986
attributes.tag: Total.Dietary.Fiber
attributes.value: 13.37333333
attributes.tag: Total.Fat
attributes.value: 66.299
attributes.tag: Insoluble.Dietary.Fiber
attributes.value: 7.817333333
attributes.tag: Energy
attributes.value: 2080.064333
attributes.tag: Total.Monounsaturated.Fatty.Acids
attributes.value: 22.16633333
attributes.tag: Omega.3.Fatty.Acids
attributes.value: 1.037
attributes.tag: percent_calories_from_alcohol
attributes.value: 0
attributes.tag: percent_calories_from_carbohydrates
attributes.value: 53.93066667
attributes.tag: percent_calories_from_fat
attributes.value: 28.82466667
attributes.tag: percent_calories_from_MUFA
attributes.value: 9.567
attributes.tag: percent_calories_from_PUFA
attributes.value: 4.121
attributes.tag: percent_calories_from_protein
attributes.value: 17.134
attributes.tag: percent_calories_from_SFA
attributes.value: 12.633
attributes.tag: Total.Polyunsaturated.Fatty.Acids
attributes.value: 9.269333333
attributes.tag: Total.Protein
attributes.value: 84.29466667
attributes.tag: Total.Saturated.Fatty.Acids
attributes.value: 29.11366667
attributes.tag: Total.Carbohydrate
attributes.value: 288.424
attributes.tag: Total.Sugars
attributes.value: 56.75833333
attributes.tag: Vegetable.Protein
attributes.value: 28.215
attributes.tag: Soluble.Dietary.Fiber
attributes.value: 5.537666667
attributes.tag: CRP_mg_L
attributes.value: 0.449752484
attributes.tag: Fecal_calprotectin_mg_g
attributes.value: 11.49
attributes.tag: log_fecal_calpro
attributes.value: 2.524928324
attributes.tag: logCRP
attributes.value: -0.799057883
attributes.tag: log_sCDAI
attributes.value: 4.905274778
attributes.tag: CRP_inflammation_cat
attributes.value: Normal_CRP
attributes.tag: FC_inflammation_cat
attributes.value: Active_FC
attributes.tag: sCDAI
attributes.value: 135
attributes.tag: stool_score
attributes.value: 56
attributes.tag: pain_score
attributes.value: 35
attributes.tag: wellbeing_score
attributes.value: 0
attributes.tag: sCDAI_interpretation
attributes.value: Remission
attributes.tag: sIBDQ
attributes.value: 42
attributes.tag: Systemic_score
attributes.value: 8
attributes.tag: Social_score
attributes.value: 14
attributes.tag: Bowel_score
attributes.value: 11
attributes.tag: Emotional_score
attributes.value: 9
attributes.tag: sIBDQ_interpretation
attributes.value: Severely impaired
attributes.tag: Fatigue
attributes.value: 54.6
attributes.tag: Fatigue_interpretation
attributes.value: Within normal limits
attributes.tag: Sleep_disturbance
attributes.value: 65.1
attributes.tag: Sleep_interpretation
attributes.value: Moderate
attributes.tag: Social_isolation
attributes.value: 67.2
attributes.tag: Isolation_interpretation
attributes.value: Moderate
attributes.tag: Ability_to_participate
attributes.value: 49.9
attributes.tag: APS_interpretation
attributes.value: Within normal limits
attributes.tag: Anxiety
attributes.value: 20
attributes.tag: Anxiety_interpretation
attributes.value: Severe
attributes.tag: Depression
attributes.value: 23
attributes.tag: PHQ_interpretation
attributes.value: Severe
attributes.tag: MR1
attributes.value: -0.421070658
attributes.tag: MR3
attributes.value: 1.456948385
attributes.tag: MR2
attributes.value: 0.861759392
attributes.tag: MR4
attributes.value: 0.385302237
attributes.tag: aminosalicylates
attributes.value: No
attributes.tag: corticosteroids
attributes.value: No
attributes.tag: inmunomodulators
attributes.value: No
attributes.tag: Anti_TNF
attributes.value: Humira
attributes.tag: Vedolizumab
attributes.value: No
attributes.tag: Ustekinumab
attributes.value: No
attributes.tag: probiotics
attributes.value: No
attributes.tag: vitamins_supplements
attributes.value: No
attributes.tag: noIBD_meds
attributes.value: Â Otro
attributes.tag: antibiotics
attributes.value: No
attributes.tag: IBDmeds_non_biologics
attributes.value: No
attributes.tag: IBDmeds_biologics
attributes.value: Yes
attributes.tag: noIBD_meds_bin
attributes.value: Yes
attributes.tag: HEI2015Vegetables
attributes.value: 0.843869587
attributes.tag: HEI2015GreensAndBeans
attributes.value: 0.641005815
attributes.tag: HEI2015TotalFruit
attributes.value: 0.367075986
attributes.tag: HEI2015WholeFruit
attributes.value: 0.734151973
attributes.tag: HEI2015WholeGrains
attributes.value: 8.531787398
attributes.tag: HEI2015Dairy
attributes.value: 10
attributes.tag: HEI2015ProteinFoods
attributes.value: 3.415919988
attributes.tag: HEI2015SeafoodPlantProtein
attributes.value: 0
attributes.tag: HEI2015FattyAcid
attributes.value: 0
attributes.tag: HEI2015Sodium
attributes.value: 3.244208775
attributes.tag: HEI2015RefinedGrains
attributes.value: 0
attributes.tag: HEI2015AddedSugars
attributes.value: 10
attributes.tag: HEI2015SatFats
attributes.value: 4.20875
attributes.tag: HEI2015TotalScore
attributes.value: 41.98676952
attributes.tag: AHEI_Vegetables
attributes.value: 0.938666668
attributes.tag: AHEI_Fruits
attributes.value: 0.7575
attributes.tag: AHEI_WholeGrains
attributes.value: 10
attributes.tag: AHEI_LongChainFats
attributes.value: 1.42666668
attributes.tag: AHEI_SugarSweetenedBeverages.FruitJuices
attributes.value: 7.55666667
attributes.tag: AHEI_NutsLegumes
attributes.value: 0
attributes.tag: AHEI_RedMeats
attributes.value: 1.602222227
attributes.tag: AHEI_TransFats
attributes.value: 10
attributes.tag: AHEI_PUFAs
attributes.value: 2.65125
attributes.tag: AHEI_Sodium
attributes.value: 7.777777778
attributes.tag: AHEI_Alcohol
attributes.value: 10
attributes.tag: AHEI10TotalScore
attributes.value: 52.71075002
attributes.tag: observed
attributes.value: 77
attributes.tag: shannon
attributes.value: 3.062557708
attributes.tag: simpson
attributes.value: 0.926662529
attributes.tag: shannon_boxcox
attributes.value: 4.189629857
attributes.tag: simpson_boxcox
attributes.value: -0.070648279
attributes.tag: EGF_pg_ml
attributes.value: 189.72
attributes.tag: Eotaxin_pg_ml
attributes.value: 29.83
attributes.tag: FGF_2_pg_ml
attributes.value: 450.93
attributes.tag: FLT_3L_pg_ml
attributes.value: 67.31
attributes.tag: Fractalkine_pg_ml
attributes.value: 263.52
attributes.tag: G_CSF_pg_ml
attributes.value: 150.84
attributes.tag: GM_CSF_pg_ml
attributes.value: 313.33
attributes.tag: GROa_pg_ml
attributes.value: 598.65
attributes.tag: IFNa2_pg_ml
attributes.value: 202.77
attributes.tag: IFNy_pg_ml
attributes.value: 30.83
attributes.tag: IL_1a_pg_ml
attributes.value: 1393.32
attributes.tag: IL_1b_pg_ml
attributes.value: 149.19
attributes.tag: IL_1RA_pg_ml
attributes.value: 94.81
attributes.tag: IL_2_pg_ml
attributes.value: 11.32
attributes.tag: IL_3_pg_ml
attributes.value: 10.29
attributes.tag: IL_4_pg_ml
attributes.value: 7.34
attributes.tag: IL_5_pg_ml
attributes.value: 6.54
attributes.tag: IL_6_pg_ml
attributes.value: 642.05
attributes.tag: IL_7_pg_ml
attributes.value: 4.53
attributes.tag: IL_8_pg_ml
attributes.value: 4409.6
attributes.tag: IL_9_pg_ml
attributes.value: 74.29
attributes.tag: IL_10_pg_ml
attributes.value: 118.14
attributes.tag: IL_12p40_pg_ml
attributes.value: 665.42
attributes.tag: IL_12p70_pg_ml
attributes.value: 25.79
attributes.tag: IL_13_pg_ml
attributes.value: 287.14
attributes.tag: IL_15_pg_ml
attributes.value: 29.83
attributes.tag: IL_17A_pg_ml
attributes.value: 70.86
attributes.tag: IL_17E_IL_25_pg_ml
attributes.value: 4065.81
attributes.tag: IL_17F_pg_ml
attributes.value: 563.32
attributes.tag: IL_18_pg_ml
attributes.value: 50.86
attributes.tag: IL_22_pg_ml
attributes.value: 506.76
attributes.tag: IL_27_pg_ml
attributes.value: 709.87
attributes.tag: IP_10_pg_ml
attributes.value: 150.51
attributes.tag: M_CSF_pg_ml
attributes.value: 102.07
attributes.tag: MCP_1_pg_ml
attributes.value: 1505.47
attributes.tag: MCP_3_pg_ml
attributes.value: 469.65
attributes.tag: MDC_pg_ml
attributes.value: 294.45
attributes.tag: MIG_CXCL9_pg_ml
attributes.value: 3835.74
attributes.tag: MIP_1a_pg_ml
attributes.value: 312.58
attributes.tag: MIP_1b_pg_ml
attributes.value: 83.22
attributes.tag: PDGF_AA_pg_ml
attributes.value: 4616.47
attributes.tag: PDGF_AB_BB_pg_ml
attributes.value: 10317.46
attributes.tag: RANTES_pg_ml
attributes.value: 3241.34
attributes.tag: sCD40L_pg_ml
attributes.value: 1663.78
attributes.tag: TGFa_pg_ml
attributes.value: 182.85
attributes.tag: TNFa_pg_ml
attributes.value: 91.7
attributes.tag: TNFb_pg_ml
attributes.value: 55.41
attributes.tag: VEGF_A_pg_ml
attributes.value: 202.88
attributes.tag: X6CKine_pg_ml
attributes.value: 693.82
attributes.tag: APRIL_pg_ml
attributes.value: 724.79
attributes.tag: BAFF_pg_ml
attributes.value: 2159.36
attributes.tag: BCA_1_pg_ml
attributes.value: 16.17
attributes.tag: CCL28_pg_ml
attributes.value: 436.31
attributes.tag: CTACK_pg_ml
attributes.value: 612.53
attributes.tag: CXCL16_pg_ml
attributes.value: 565.01
attributes.tag: ENA_78_pg_ml
attributes.value: 516.85
attributes.tag: Eotaxin_2_pg_ml
attributes.value: 589.75
attributes.tag: Eotaxin_3_pg_ml
attributes.value: 45.87
attributes.tag: GCP_2_pg_ml
attributes.value: 76.7
attributes.tag: Granzyme_A_pg_ml
attributes.value: 51.08
attributes.tag: Granzyme_B_pg_ml
attributes.value: 30.24
attributes.tag: HMGB1_pg_ml
attributes.value: 1426.22
attributes.tag: I_309_pg_ml
attributes.value: 6.33
attributes.tag: I_TAC_pg_ml
attributes.value: 68.87
attributes.tag: IFNb_pg_ml
attributes.value: 46.66
attributes.tag: IFNw_pg_ml
attributes.value: 13.38
attributes.tag: IL_11_pg_ml
attributes.value: 3.2
attributes.tag: IL_16_pg_ml
attributes.value: 1704.25
attributes.tag: IL_20_pg_ml
attributes.value: 30.26
attributes.tag: IL_21_pg_ml
attributes.value: 6.39
attributes.tag: IL_23_pg_ml
attributes.value: 1840.05
attributes.tag: IL_24_pg_ml
attributes.value: 130.68
attributes.tag: IL_28A_pg_ml
attributes.value: 31.85
attributes.tag: IL_29_pg_ml
attributes.value: 9.72
attributes.tag: IL_31_pg_ml
attributes.value: 158.53
attributes.tag: IL_33_pg_ml
attributes.value: 8.43
attributes.tag: IL_34_pg_ml
attributes.value: 8.32
attributes.tag: IL_35_pg_ml
attributes.value: 294.93
attributes.tag: LIF_pg_ml
attributes.value: 2.98
attributes.tag: Lymphotactin_pg_ml
attributes.value: 33.75
attributes.tag: MCP_2_pg_ml
attributes.value: 33.88
attributes.tag: MCP_4_pg_ml
attributes.value: 117.29
attributes.tag: MIP_1d_pg_ml
attributes.value: 799.86
attributes.tag: MIP_3a_pg_ml
attributes.value: 247.61
attributes.tag: MIP_3b_pg_ml
attributes.value: 12.4
attributes.tag: MPIF_1_pg_ml
attributes.value: 163.77
attributes.tag: Perforin_pg_ml
attributes.value: 6023.25
attributes.tag: sCD137_pg_ml
attributes.value: 25.25
attributes.tag: SCF_pg_ml
attributes.value: 505.71
attributes.tag: SDF_1_pg_ml
attributes.value: 1703.28
attributes.tag: sFas_ng_ml
attributes.value: 9.49
attributes.tag: sFasL_pg_ml
attributes.value: 69.5
attributes.tag: TARC_pg_ml
attributes.value: 25.94
attributes.tag: TPO_pg_ml
attributes.value: 26.87
attributes.tag: TRAIL_pg_ml
attributes.value: 37.74
attributes.tag: TSLP_pg_ml
attributes.value: 2.59
attributes.tag: BioSampleModel
attributes.value: MIMS.me
attributes.tag: BioSampleModel
attributes.value: MIGS/MIMS/MIMARKS.human-gut