organism: human gut metagenome
attributes.tag: host
attributes.value: Homo sapiens
attributes.tag: collection_date
attributes.value: 2023-07-19
attributes.tag: geo_loc_name
attributes.value: Puerto Rico: Isabela
attributes.tag: env_broad_scale
attributes.value: human-associated habitat
attributes.tag: env_local_scale
attributes.value: human gastrointestinal tract
attributes.tag: env_medium
attributes.value: feces
attributes.tag: lat_lon
attributes.value: 18.4936 N 67.0358 W
attributes.tag: patient_id
attributes.value: PR1044
attributes.tag: Age
attributes.value: 27
attributes.tag: Age_Cat
attributes.value: Age 21-30
attributes.tag: Sex
attributes.value: male
attributes.tag: BMI
attributes.value: 22.31303313
attributes.tag: BMI_cat
attributes.value: Normal Weight
attributes.tag: basicinfo_zipcode
attributes.value: 698
attributes.tag: maritalstatus
attributes.value: Single
attributes.tag: income
attributes.value: $40,000-$59,000
attributes.tag: smoker
attributes.value: Nonsmoker
attributes.tag: education
attributes.value: Baccalaureate
attributes.tag: job
attributes.value: Full time job
attributes.tag: race
attributes.value: White
attributes.tag: Alcohol
attributes.value: 0.068333333
attributes.tag: Animal.Protein
attributes.value: 103.636
attributes.tag: Total.Added.Sugars
attributes.value: 30.31666667
attributes.tag: Added.Sugars.by.Available.Carbohydrate
attributes.value: 31.26233333
attributes.tag: Caffeine
attributes.value: 0
attributes.tag: Cholesterol
attributes.value: 646.365
attributes.tag: Total.Dietary.Fiber
attributes.value: 9.817666667
attributes.tag: Total.Fat
attributes.value: 71.732
attributes.tag: Insoluble.Dietary.Fiber
attributes.value: 5.435666667
attributes.tag: Energy
attributes.value: 2052.484
attributes.tag: Total.Monounsaturated.Fatty.Acids
attributes.value: 25.28466667
attributes.tag: Omega.3.Fatty.Acids
attributes.value: 1.252333333
attributes.tag: percent_calories_from_alcohol
attributes.value: 0.023666667
attributes.tag: percent_calories_from_carbohydrates
attributes.value: 42.94733333
attributes.tag: percent_calories_from_fat
attributes.value: 31.094
attributes.tag: percent_calories_from_MUFA
attributes.value: 10.94466667
attributes.tag: percent_calories_from_PUFA
attributes.value: 5.173666667
attributes.tag: percent_calories_from_protein
attributes.value: 25.778
attributes.tag: percent_calories_from_SFA
attributes.value: 11.39766667
attributes.tag: Total.Polyunsaturated.Fatty.Acids
attributes.value: 11.82
attributes.tag: Total.Protein
attributes.value: 124.5246667
attributes.tag: Total.Saturated.Fatty.Acids
attributes.value: 26.409
attributes.tag: Total.Carbohydrate
attributes.value: 224.1183333
attributes.tag: Total.Sugars
attributes.value: 99.997
attributes.tag: Vegetable.Protein
attributes.value: 20.889
attributes.tag: Soluble.Dietary.Fiber
attributes.value: 4.315333333
attributes.tag: CRP_mg_L
attributes.value: 0.034822793
attributes.tag: Fecal_calprotectin_mg_g
attributes.value: 22.96
attributes.tag: log_fecal_calpro
attributes.value: 3.176385773
attributes.tag: logCRP
attributes.value: -3.357483135
attributes.tag: log_sCDAI
attributes.value: 4.691347882
attributes.tag: CRP_inflammation_cat
attributes.value: Normal_CRP
attributes.tag: FC_inflammation_cat
attributes.value: Active_FC
attributes.tag: sCDAI
attributes.value: 109
attributes.tag: stool_score
attributes.value: 30
attributes.tag: pain_score
attributes.value: 35
attributes.tag: wellbeing_score
attributes.value: 0
attributes.tag: sCDAI_interpretation
attributes.value: Remission
attributes.tag: sIBDQ
attributes.value: 42
attributes.tag: Systemic_score
attributes.value: 5
attributes.tag: Social_score
attributes.value: 9
attributes.tag: Bowel_score
attributes.value: 14
attributes.tag: Emotional_score
attributes.value: 14
attributes.tag: sIBDQ_interpretation
attributes.value: Severely impaired
attributes.tag: Fatigue
attributes.value: 53.6
attributes.tag: Fatigue_interpretation
attributes.value: Within normal limits
attributes.tag: Sleep_disturbance
attributes.value: 56.2
attributes.tag: Sleep_interpretation
attributes.value: Mild
attributes.tag: Social_isolation
attributes.value: 43.1
attributes.tag: Isolation_interpretation
attributes.value: Within normal limits
attributes.tag: Ability_to_participate
attributes.value: 48.9
attributes.tag: APS_interpretation
attributes.value: Within normal limits
attributes.tag: Anxiety
attributes.value: 8
attributes.tag: Anxiety_interpretation
attributes.value: Mild
attributes.tag: Depression
attributes.value: 4
attributes.tag: PHQ_interpretation
attributes.value: None-minimal
attributes.tag: MR1
attributes.value: 0.048297469
attributes.tag: MR3
attributes.value: 0.256007702
attributes.tag: MR2
attributes.value: -0.503273931
attributes.tag: MR4
attributes.value: -0.75437758
attributes.tag: aminosalicylates
attributes.value: No
attributes.tag: corticosteroids
attributes.value: No
attributes.tag: inmunomodulators
attributes.value: Azatioprina
attributes.tag: Anti_TNF
attributes.value: Humira
attributes.tag: Vedolizumab
attributes.value: No
attributes.tag: Ustekinumab
attributes.value: No
attributes.tag: probiotics
attributes.value: No
attributes.tag: vitamins_supplements
attributes.value: No
attributes.tag: noIBD_meds
attributes.value: No
attributes.tag: antibiotics
attributes.value: No
attributes.tag: IBDmeds_non_biologics
attributes.value: Yes
attributes.tag: IBDmeds_biologics
attributes.value: Yes
attributes.tag: noIBD_meds_bin
attributes.value: No
attributes.tag: HEI2015Vegetables
attributes.value: 0.672872776
attributes.tag: HEI2015GreensAndBeans
attributes.value: 0.759242622
attributes.tag: HEI2015TotalFruit
attributes.value: 5
attributes.tag: HEI2015WholeFruit
attributes.value: 1.465703671
attributes.tag: HEI2015WholeGrains
attributes.value: 1.903384712
attributes.tag: HEI2015Dairy
attributes.value: 4.724731544
attributes.tag: HEI2015ProteinFoods
attributes.value: 5
attributes.tag: HEI2015SeafoodPlantProtein
attributes.value: 0.745032198
attributes.tag: HEI2015FattyAcid
attributes.value: 1.576929388
attributes.tag: HEI2015Sodium
attributes.value: 6.952146945
attributes.tag: HEI2015RefinedGrains
attributes.value: 6.072670059
attributes.tag: HEI2015AddedSugars
attributes.value: 10
attributes.tag: HEI2015SatFats
attributes.value: 5.752916667
attributes.tag: HEI2015TotalScore
attributes.value: 50.62563058
attributes.tag: AHEI_Vegetables
attributes.value: 0.883333332
attributes.tag: AHEI_Fruits
attributes.value: 1.3125
attributes.tag: AHEI_WholeGrains
attributes.value: 2.215040933
attributes.tag: AHEI_LongChainFats
attributes.value: 5.57333336
attributes.tag: AHEI_SugarSweetenedBeverages.FruitJuices
attributes.value: 0
attributes.tag: AHEI_NutsLegumes
attributes.value: 1.22333333
attributes.tag: AHEI_RedMeats
attributes.value: 0
attributes.tag: AHEI_TransFats
attributes.value: 10
attributes.tag: AHEI_PUFAs
attributes.value: 3.967083334
attributes.tag: AHEI_Sodium
attributes.value: 4.444444444
attributes.tag: AHEI_Alcohol
attributes.value: 10
attributes.tag: AHEI10TotalScore
attributes.value: 39.61906873
attributes.tag: observed
attributes.value: 26
attributes.tag: shannon
attributes.value: 2.179346407
attributes.tag: simpson
attributes.value: 0.831480484
attributes.tag: shannon_boxcox
attributes.value: 1.874775381
attributes.tag: simpson_boxcox
attributes.value: -0.154320102
attributes.tag: EGF_pg_ml
attributes.value: 458.08
attributes.tag: Eotaxin_pg_ml
attributes.value: 105.3
attributes.tag: FGF_2_pg_ml
attributes.value: 269.27
attributes.tag: FLT_3L_pg_ml
attributes.value: 32.32
attributes.tag: Fractalkine_pg_ml
attributes.value: 236.78
attributes.tag: G_CSF_pg_ml
attributes.value: 79.41
attributes.tag: GM_CSF_pg_ml
attributes.value: 353.56
attributes.tag: GROa_pg_ml
attributes.value: 279.63
attributes.tag: IFNa2_pg_ml
attributes.value: 110.09
attributes.tag: IFNy_pg_ml
attributes.value: 42.09
attributes.tag: IL_1a_pg_ml
attributes.value: 1036.87
attributes.tag: IL_1b_pg_ml
attributes.value: 104.03
attributes.tag: IL_1RA_pg_ml
attributes.value: 233.26
attributes.tag: IL_2_pg_ml
attributes.value: 14.27
attributes.tag: IL_3_pg_ml
attributes.value: 2.5
attributes.tag: IL_4_pg_ml
attributes.value: 11.79
attributes.tag: IL_5_pg_ml
attributes.value: 4.01
attributes.tag: IL_6_pg_ml
attributes.value: 404.05
attributes.tag: IL_7_pg_ml
attributes.value: 9.74
attributes.tag: IL_8_pg_ml
attributes.value: 2367.65
attributes.tag: IL_9_pg_ml
attributes.value: 42.11
attributes.tag: IL_10_pg_ml
attributes.value: 76.29
attributes.tag: IL_12p40_pg_ml
attributes.value: 312.11
attributes.tag: IL_12p70_pg_ml
attributes.value: 23.9
attributes.tag: IL_13_pg_ml
attributes.value: 282.89
attributes.tag: IL_15_pg_ml
attributes.value: 23.37
attributes.tag: IL_17A_pg_ml
attributes.value: 45.76
attributes.tag: IL_17E_IL_25_pg_ml
attributes.value: 1957.02
attributes.tag: IL_17F_pg_ml
attributes.value: 122.41
attributes.tag: IL_18_pg_ml
attributes.value: 55.63
attributes.tag: IL_22_pg_ml
attributes.value: 523.67
attributes.tag: IL_27_pg_ml
attributes.value: 1093.9
attributes.tag: IP_10_pg_ml
attributes.value: 67.6
attributes.tag: M_CSF_pg_ml
attributes.value: 202.22
attributes.tag: MCP_1_pg_ml
attributes.value: 1196.6
attributes.tag: MCP_3_pg_ml
attributes.value: 300.6
attributes.tag: MDC_pg_ml
attributes.value: 514.72
attributes.tag: MIG_CXCL9_pg_ml
attributes.value: 1407.44
attributes.tag: MIP_1a_pg_ml
attributes.value: 241.02
attributes.tag: MIP_1b_pg_ml
attributes.value: 428.03
attributes.tag: PDGF_AA_pg_ml
attributes.value: 7875.94
attributes.tag: PDGF_AB_BB_pg_ml
attributes.value: 10650.83
attributes.tag: RANTES_pg_ml
attributes.value: 862.82
attributes.tag: sCD40L_pg_ml
attributes.value: 2235.24
attributes.tag: TGFa_pg_ml
attributes.value: 74.89
attributes.tag: TNFa_pg_ml
attributes.value: 105.9
attributes.tag: TNFb_pg_ml
attributes.value: 57.5
attributes.tag: VEGF_A_pg_ml
attributes.value: 363.95
attributes.tag: X6CKine_pg_ml
attributes.value: 715.99
attributes.tag: APRIL_pg_ml
attributes.value: 2950.36
attributes.tag: BAFF_pg_ml
attributes.value: 1101.78
attributes.tag: BCA_1_pg_ml
attributes.value: 31.05
attributes.tag: CCL28_pg_ml
attributes.value: 457.38
attributes.tag: CTACK_pg_ml
attributes.value: 810.31
attributes.tag: CXCL16_pg_ml
attributes.value: 2382.54
attributes.tag: ENA_78_pg_ml
attributes.value: 887.97
attributes.tag: Eotaxin_2_pg_ml
attributes.value: 477.09
attributes.tag: Eotaxin_3_pg_ml
attributes.value: 53.68
attributes.tag: GCP_2_pg_ml
attributes.value: 142.16
attributes.tag: Granzyme_A_pg_ml
attributes.value: 74.94
attributes.tag: Granzyme_B_pg_ml
attributes.value: 25.24
attributes.tag: HMGB1_pg_ml
attributes.value: 4205.71
attributes.tag: I_309_pg_ml
attributes.value: 18.8
attributes.tag: I_TAC_pg_ml
attributes.value: 117.3
attributes.tag: IFNb_pg_ml
attributes.value: 31.1
attributes.tag: IFNw_pg_ml
attributes.value: 6.89
attributes.tag: IL_11_pg_ml
attributes.value: 3.2
attributes.tag: IL_16_pg_ml
attributes.value: 990.17
attributes.tag: IL_20_pg_ml
attributes.value: 38.21
attributes.tag: IL_21_pg_ml
attributes.value: 9.67
attributes.tag: IL_23_pg_ml
attributes.value: 681.55
attributes.tag: IL_24_pg_ml
attributes.value: 90.95
attributes.tag: IL_28A_pg_ml
attributes.value: 22.2
attributes.tag: IL_29_pg_ml
attributes.value: 4.68
attributes.tag: IL_31_pg_ml
attributes.value: 60.49
attributes.tag: IL_33_pg_ml
attributes.value: 12.01
attributes.tag: IL_34_pg_ml
attributes.value: 11.9
attributes.tag: IL_35_pg_ml
attributes.value: 253.84
attributes.tag: LIF_pg_ml
attributes.value: 2.98
attributes.tag: Lymphotactin_pg_ml
attributes.value: 50.91
attributes.tag: MCP_2_pg_ml
attributes.value: 35.07
attributes.tag: MCP_4_pg_ml
attributes.value: 99.95
attributes.tag: MIP_1d_pg_ml
attributes.value: 1898.04
attributes.tag: MIP_3a_pg_ml
attributes.value: 456.95
attributes.tag: MIP_3b_pg_ml
attributes.value: 43.67
attributes.tag: MPIF_1_pg_ml
attributes.value: 307.79
attributes.tag: Perforin_pg_ml
attributes.value: 8087.61
attributes.tag: sCD137_pg_ml
attributes.value: 16.43
attributes.tag: SCF_pg_ml
attributes.value: 597.01
attributes.tag: SDF_1_pg_ml
attributes.value: 2954.7
attributes.tag: sFas_ng_ml
attributes.value: 28.97
attributes.tag: sFasL_pg_ml
attributes.value: 269.05
attributes.tag: TARC_pg_ml
attributes.value: 37.11
attributes.tag: TPO_pg_ml
attributes.value: 43.29
attributes.tag: TRAIL_pg_ml
attributes.value: 23.8
attributes.tag: TSLP_pg_ml
attributes.value: 2.31
attributes.tag: BioSampleModel
attributes.value: MIMS.me
attributes.tag: BioSampleModel
attributes.value: MIGS/MIMS/MIMARKS.human-gut