title: MAG from Co-assembly
organism: Flavobacteriaceae bacterium
description: MAG retrieved from co-assembly of all metagenomic samples of the bioproject PRJEB90443.
attributes.tag: 16S recovery software
attributes.value: infernal v1.1.5, Rfam 15.0
attributes.tag: 16s recovered
attributes.value: No
attributes.tag: ENA first public
attributes.value: 2025-08-01
attributes.tag: INSDC center name
attributes.value: Uni Bremen
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: bowtie2 v2.5.4
attributes.tag: Submitter Id
attributes.value: Co_bin_825_strict
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics.
attributes.tag: assembly software
attributes.value: megahit v1.2.9, SPAdes v4.0.0
attributes.tag: binning parameters
attributes.value: differential coverage, tetranucleotide frequency
attributes.tag: binning software
attributes.value: concoct v1.1.0, metabat2 v2.17
attributes.tag: broad-scale environmental context
attributes.value: marine biome [ENVO:00000447]
attributes.tag: collection date
attributes.value: missing: sample group
attributes.tag: completeness score
attributes.value: 88.27
attributes.tag: completeness software
attributes.value: checkm2 v1.1.0
attributes.tag: contamination score
attributes.value: 3.66
attributes.tag: environmental medium
attributes.value: saline water [ENVO:00002010]
attributes.tag: geographic location (country and/or sea)
attributes.value: missing: sample group
attributes.tag: geographic location (latitude)
attributes.value: missing: sample group
attributes.tag: geographic location (longitude)
attributes.value: missing: sample group
attributes.tag: isolation_source
attributes.value: marine water
attributes.tag: local environmental context
attributes.value: sea water environment [ENVO:01000321]
attributes.tag: metagenomic source
attributes.value: marine plankton metagenome
attributes.tag: number of standard tRNAs extracted
attributes.value: 24
attributes.tag: project name
attributes.value: Investigation of environmental disturbances on microbial communities in coastal environments
attributes.tag: reassembly post binning
attributes.value: Yes
attributes.tag: sample derived from
attributes.value: ERR15116726,ERR15116725,ERR15116724,ERR15116723,ERR15116722,ERR15116721,ERR15116720,ERR15116719,ERR15116718,ERR15116717,ERR15116716,ERR15116715,ERR15116714,ERR15116713,ERR15116712,ERR15116711,ERR15116710,ERR15116709,ERR15116708,ERR15116707,ERR15116706,ERR15116705,ERR15116704,ERR15116703,ERR15116702,ERR15116701,ERR15116700,ERR15116699,ERR15116698,ERR15116697,ERR15116696,ERR15116695,ERR15116694,ERR15116693,ERR15116692,ERR15116691,ERR15116690,ERR15116689,ERR15116688,ERR15116687,ERR15116686,ERR15116685,ERR15116684,ERR15116683,ERR15116682,ERR15116681,ERR15116680,ERR15116679,ERR15116882,ERR15116881,ERR15116880,ERR15116879,ERR15116878,ERR15116877,ERR15116876,ERR15116875,ERR15116874,ERR15116873,ERR15116872,ERR15116871,ERR15116870,ERR15116869,ERR15116868,ERR15116867,ERR15116866,ERR15116865,ERR15116864,ERR15116863,ERR15116862,ERR15116861,ERR15116860,ERR15116859,ERR15116858,ERR15116857,ERR15116856,ERR15116855,ERR15116854,ERR15116853,ERR15116852,ERR15116851,ERR15116850,ERR15116849,ERR15116848,ERR15116847,ERR15116846,ERR15116845,ERR15116844,ERR15116843,ERR15116678,ERR15116677,ERR15116676,ERR15116675,ERR15116674,ERR15116673,ERR15116672,ERR15116671,ERR15116670,ERR15116669,ERR15116668,ERR15116667,ERR15116666,ERR15116665,ERR15116664,ERR15116663,ERR15116662,ERR15116661,ERR15116660,ERR15116659,ERR15116658,ERR15116657,ERR15116656,ERR15116655,ERR15116654,ERR15116653,ERR15116652,ERR15116651,ERR15116650,ERR15116649,ERR15116648,ERR15116647,ERR15116646,ERR15116645
attributes.tag: sample name
attributes.value: Co_bin_825_strict
attributes.tag: scientific_name
attributes.value: Flavobacteriaceae bacterium
attributes.tag: tRNA extraction software
attributes.value: tRNAscan-SE 2.0
attributes.tag: taxonomic classification
attributes.value: gtdbtk v2.4.1, Genome Taxonomy Database R226
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach