title: Barcelona patient 8-Gum-week0
organism: oral metagenome
description: Oral mucosal swab from pediatric Crohn's disease patient
attributes.tag: strain
attributes.value: not collected
attributes.tag: isolate
attributes.value: Barcelona patient 8-Gum-week0
attributes.tag: cultivar
attributes.value: not collected
attributes.tag: ecotype
attributes.value: Crohn's disease
attributes.tag: collection_date
attributes.value: 2020-04-01/2022-10-31
attributes.tag: env_broad_scale
attributes.value: UBERON:0000165
attributes.tag: env_local_scale
attributes.value: UBERON:0011601
attributes.tag: env_medium
attributes.value: not applicable
attributes.tag: geo_loc_name
attributes.value: Spain:Barcelona
attributes.tag: host
attributes.value: Homo sapiens
attributes.tag: isol_growth_condt
attributes.value: not applicable
attributes.tag: lat_lon
attributes.value: 41.39 N 2.17 E
attributes.tag: biotic_relationship
attributes.value: commensal
attributes.tag: host_age
attributes.value: 15
attributes.tag: host_sex
attributes.value: male
attributes.tag: host_body_mass_index
attributes.value: 19.4126275709247
attributes.tag: host_diet
attributes.value: 8 weeks of EEN followed by free diet + 25% partial enteral nutrition (PEN, Modulen IBD®)
attributes.tag: Treatment Duration in weeks
attributes.value: 8
attributes.tag: host_disease
attributes.value: Crohn's Disease
attributes.tag: Pediatric Crohn's Disease Activity Index (PCDAI)
attributes.value: 22.5
attributes.tag: host_tissue_sampled
attributes.value: buccal gingiva
attributes.tag: samp_collect_device
attributes.value: polyurethane sponge swab
attributes.tag: samp_mat_process
attributes.value: Swab stored dry at -80˚C for up to 12 months, DNA extracted as per PMID:36239621
attributes.tag: samp_store_dur
attributes.value: 12 months
attributes.tag: samp_store_temp
attributes.value: -80˚C
attributes.tag: BioSampleModel
attributes.value: MIMARKS.specimen
attributes.tag: BioSampleModel
attributes.value: MIGS/MIMS/MIMARKS.human-oral