organism: Candidatus Pelagibacterales bacterium
description: Allofontibacter temperatus assembled from Lake Most, Czech Republic
attributes.tag: ENA first public
attributes.value: 2025-04-04
attributes.tag: INSDC center name
attributes.value: BIOLOGY CENTRE CAS, INSTITUTE OF HYDROBIOLOGY
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: MsE-30jul19-LR-39
attributes.tag: assembly quality
attributes.value: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
attributes.tag: assembly software
attributes.value: MEGAHIT
attributes.tag: binning parameters
attributes.value: coverage and kmer
attributes.tag: binning software
attributes.value: MetaBAT, MetaBAT2, MaxBin
attributes.tag: broad-scale environmental context
attributes.value: freshwater biome
attributes.tag: collection date
attributes.value: 2019-07-30
attributes.tag: completeness score
attributes.value: 91.57
attributes.tag: completeness software
attributes.value: CheckM
attributes.tag: contamination score
attributes.value: 4.82
attributes.tag: environmental medium
attributes.value: post-mining lake
attributes.tag: geographic location (country and/or sea)
attributes.value: Czech Republic
attributes.tag: geographic location (latitude)
attributes.value: 50.53669
attributes.tag: geographic location (longitude)
attributes.value: 13.64517
attributes.tag: isolation_source
attributes.value: Lake Most
attributes.tag: local environmental context
attributes.value: freshwater lake
attributes.tag: metagenomic source
attributes.value: lake water metagenome
attributes.tag: project name
attributes.value: PRJEB35770
attributes.tag: sample derived from
attributes.value: ERS4065083
attributes.tag: sample name
attributes.value: MsE-30jul19-LR-39
attributes.tag: scientific_name
attributes.value: Candidatus Pelagibacterales bacterium
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach