organism: Candidatus Nitrosopumilus sp.
attributes.tag: 16S recovery software
attributes.value: PROKKA (version 1.14.6)
attributes.tag: 16s recovered
attributes.value: Yes
attributes.tag: ENA first public
attributes.value: 2025-02-27
attributes.tag: GAL
attributes.value: Geomar Helmholtz Centre
attributes.tag: GAL_sample_id
attributes.value: NOT PROVIDED
attributes.tag: INSDC center name
attributes.value: Tree of Life Programme
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: Minimap2 (version 2.24-r1122)
attributes.tag: Submitter Id
attributes.value: 1ba6f6db-ac8b-4e9a-a1a8-fa3d0cad2b01
attributes.tag: assembly quality
attributes.value: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
attributes.tag: assembly software
attributes.value: metaMDBG (version 0.3)
attributes.tag: binning parameters
attributes.value: coverage; graph
attributes.tag: binning software
attributes.value: MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
attributes.tag: broad-scale environmental context
attributes.value: aquatic biome
attributes.tag: collected_by
attributes.value: KATHRIN BUSCH
attributes.tag: collecting institution
attributes.value: GEOMAR
attributes.tag: collection date
attributes.value: 2017-06-12
attributes.tag: completeness score
attributes.value: 100
attributes.tag: completeness software
attributes.value: checkM (version 1.2.2); checkM_DB (release 2015-01-16)
attributes.tag: contamination score
attributes.value: 0.97
attributes.tag: depth
attributes.value: 660
attributes.tag: environmental medium
attributes.value: adult sponge tissue
attributes.tag: geographic location (country and/or sea)
attributes.value: Germany
attributes.tag: geographic location (latitude)
attributes.value: 54.19
attributes.tag: geographic location (longitude)
attributes.value: 10.09
attributes.tag: geographic location (region and locality)
attributes.value: Kiel | GEOMAR
attributes.tag: habitat
attributes.value: rock
attributes.tag: host life stage
attributes.value: adult
attributes.tag: host scientific name
attributes.value: Calthropella geodioides
attributes.tag: host sex
attributes.value: not applicable
attributes.tag: host taxid
attributes.value: 1006834
attributes.tag: identified_by
attributes.value: PILAR RÌOS
attributes.tag: identifier_affiliation
attributes.value: IEO, Spain
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: Sponge: Calthropella geodioides
attributes.tag: local environmental context
attributes.value: marine biome
attributes.tag: metagenomic source
attributes.value: sponge metagenome
attributes.tag: number of standard tRNAs extracted
attributes.value: 44
attributes.tag: organism part
attributes.value: WHOLE ORGANISM
attributes.tag: project name
attributes.value: ToL
attributes.tag: relationship
attributes.value: unknown
attributes.tag: sample derived from
attributes.value: SAMEA117780117
attributes.tag: sample name
attributes.value: 1ba6f6db-ac8b-4e9a-a1a8-fa3d0cad2b01
attributes.tag: scientific_name
attributes.value: Nitrosopumilus sp.
attributes.tag: sequencing method
attributes.value: Pacbio Sequel II
attributes.tag: specimen_id
attributes.value: GHC0000301
attributes.tag: specimen_voucher
attributes.value: NOT PROVIDED
attributes.tag: symbiont
attributes.value: N
attributes.tag: tRNA extraction software
attributes.value: PROKKA (version 1.14.6)
attributes.tag: taxonomic classification
attributes.value: GTDB-TK (version 2.4.0); GTDB (release 214)
attributes.tag: taxonomic identity marker
attributes.value: taxonomic classification defined by topology and ANI
attributes.tag: tolid
attributes.value: odCalGeod1.Nitrosopumilus_sp_1