title: Metagenome-assembled genome: SRP319275_co2_333
organism: uncultured Armatimonadia bacterium
description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR14492185,SRR14492187 of study SRP319275.
attributes.tag: ENA first public
attributes.value: 2024-12-11
attributes.tag: INSDC center name
attributes.value: CMR
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: SRP319275_co2_333
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaSPAdes;3.15.4;default
attributes.tag: binning parameters
attributes.value: coverage and kmer
attributes.tag: binning software
attributes.value: VAMB;3.0.2;default
attributes.tag: broad-scale environmental context
attributes.value: terrestrial
attributes.tag: collection date
attributes.value: 2018-07-24
attributes.tag: completeness score
attributes.value: 96.97
attributes.tag: completeness software
attributes.value: CheckM2;1.0.2;default
attributes.tag: contamination score
attributes.value: 4.85
attributes.tag: environmental medium
attributes.value: terrestrial
attributes.tag: geographic location (country and/or sea)
attributes.value: China
attributes.tag: geographic location (latitude)
attributes.value: 43.6
attributes.tag: geographic location (longitude)
attributes.value: 93.02
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: sediment metagenome
attributes.tag: local environmental context
attributes.value: sediment biome
attributes.tag: metagenomic source
attributes.value: sediment metagenome
attributes.tag: project name
attributes.value: metagenomic sequencing data of water, sediment and soil samples from different salt lakes in China. If you have any questions about access to the private data or seeking for permission to your publication then the submitter is the person to contact to.
attributes.tag: sample derived from
attributes.value: SAMN19073017,SAMN19073015
attributes.tag: sample name
attributes.value: SRP319275_co2_333
attributes.tag: scientific_name
attributes.value: uncultured Armatimonadia bacterium
attributes.tag: sequencing method
attributes.value: Illumina NovaSeq 6000
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach