title: Metagenome-assembled genome: binchicken_co169_11
organism: uncultured Desulfobulbia bacterium
description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR446575,SRR446576 of study SRP011637.
attributes.tag: ENA first public
attributes.value: 2024-12-11
attributes.tag: INSDC center name
attributes.value: CMR
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: binchicken_co169_11
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: MEGAHIT;1.2.9;default
attributes.tag: binning parameters
attributes.value: coverage and kmer
attributes.tag: binning software
attributes.value: MetaBAT2;2.15;default
attributes.tag: broad-scale environmental context
attributes.value: aquatic
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 81.72
attributes.tag: completeness software
attributes.value: CheckM2;1.0.2;default
attributes.tag: contamination score
attributes.value: 5.25
attributes.tag: environmental medium
attributes.value: aquatic
attributes.tag: geographic location (country and/or sea)
attributes.value: not provided
attributes.tag: geographic location (latitude)
attributes.value: not provided
attributes.tag: geographic location (longitude)
attributes.value: not provided
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: aquifer metagenome
attributes.tag: local environmental context
attributes.value: aquifer biome
attributes.tag: metagenomic source
attributes.value: aquifer metagenome
attributes.tag: project name
attributes.value: The objective of the research at the Rifle site is to gain a comprehensive and mechanistic understanding of the microbial factors and associated geochemistry controlling uranium mobility at the field scale so that DOE can confidently remediate uranium plumes as well as support stewardship of uranium-contaminated sites. <p> Collected from a contaminated aquifer bioremediation site.
attributes.tag: sample derived from
attributes.value: SAMN00829159,SAMN00829160
attributes.tag: sample name
attributes.value: binchicken_co169_11
attributes.tag: scientific_name
attributes.value: uncultured Desulfobulbia bacterium
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach