title: Metagenome-assembled genome: SRP329387_co2_22
organism: uncultured Candidatus Actinomarina sp.
description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR15213103,SRR15213105 of study SRP329387.
attributes.tag: ENA first public
attributes.value: 2024-12-11
attributes.tag: INSDC center name
attributes.value: CMR
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: SRP329387_co2_22
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaSPAdes;3.15.4;default
attributes.tag: binning parameters
attributes.value: coverage and kmer
attributes.tag: binning software
attributes.value: MetaBAT2;2.15;default
attributes.tag: broad-scale environmental context
attributes.value: aquatic
attributes.tag: collection date
attributes.value: 2018
attributes.tag: completeness score
attributes.value: 81.03
attributes.tag: completeness software
attributes.value: CheckM2;1.0.2;default
attributes.tag: contamination score
attributes.value: 2.88
attributes.tag: environmental medium
attributes.value: aquatic
attributes.tag: geographic location (country and/or sea)
attributes.value: China
attributes.tag: geographic location (latitude)
attributes.value: not provided
attributes.tag: geographic location (longitude)
attributes.value: not provided
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: estuary metagenome
attributes.tag: local environmental context
attributes.value: estuary biome
attributes.tag: metagenomic source
attributes.value: estuary metagenome
attributes.tag: project name
attributes.value: Marine group II euryarchaea (MGII) dominates the planktonic archaeal community in global surface seawater and is associated to particulate organic matters which mainly consist of polysaccharides. However, the polysaccharides metabolism of MGII euryarchaea is unclear. In this study, the distribution and potential for polysaccharides metabolism of MGII euryarchaea in estuarine area were investigated.
attributes.tag: sample derived from
attributes.value: SAMN20309215,SAMN20309213
attributes.tag: sample name
attributes.value: SRP329387_co2_22
attributes.tag: scientific_name
attributes.value: uncultured Candidatus Actinomarina sp.
attributes.tag: sequencing method
attributes.value: HiSeq X Ten
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach