title: Metagenome-assembled genome: binchicken_co247_5
organism: uncultured Candidatus Saccharibacteria bacterium
description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR1636516,SRR1636517 of study SRP049438.
attributes.tag: ENA first public
attributes.value: 2024-12-11
attributes.tag: INSDC center name
attributes.value: CMR
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: binchicken_co247_5
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaSPAdes;3.15.4;default
attributes.tag: binning parameters
attributes.value: coverage and kmer
attributes.tag: binning software
attributes.value: MetaBAT2;2.15;default
attributes.tag: broad-scale environmental context
attributes.value: aquatic
attributes.tag: collection date
attributes.value: 2005-06-14
attributes.tag: completeness score
attributes.value: 96.15
attributes.tag: completeness software
attributes.value: CheckM2;1.0.2;default
attributes.tag: contamination score
attributes.value: 1.79
attributes.tag: environmental medium
attributes.value: aquatic
attributes.tag: geographic location (country and/or sea)
attributes.value: New Caledonia
attributes.tag: geographic location (latitude)
attributes.value: -22.3609167
attributes.tag: geographic location (longitude)
attributes.value: 166.8799667
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: aquatic metagenome
attributes.tag: local environmental context
attributes.value: aquatic biome
attributes.tag: metagenomic source
attributes.value: aquatic metagenome
attributes.tag: project name
attributes.value: Ultramafic rocks in the Earth's mantle represent a tremendous reservoir of carbon and reducing power. Upon tectonic uplift and exposure to fluid flow, serpentinization of these materials generates copious energy, sustains abiogenic synthesis of organic molecules, and provides opportunities for subsurface microbial communities to interact with deep carbon pools.
attributes.tag: sample derived from
attributes.value: SAMN03154341,SAMN03154342
attributes.tag: sample name
attributes.value: binchicken_co247_5
attributes.tag: scientific_name
attributes.value: uncultured Candidatus Saccharibacteria bacterium
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 1000
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach