title: Metagenome-assembled genome: SRP092796_co3_879
organism: uncultured Lentisphaerales bacterium
description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR5002383,SRR5002404 of study SRP092796.
attributes.tag: ENA first public
attributes.value: 2024-12-11
attributes.tag: INSDC center name
attributes.value: CMR
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: SRP092796_co3_879
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaSPAdes;3.15.4;default
attributes.tag: binning parameters
attributes.value: coverage and kmer
attributes.tag: binning software
attributes.value: VAMB;3.0.2;default
attributes.tag: broad-scale environmental context
attributes.value: aquatic
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 94.35
attributes.tag: completeness software
attributes.value: CheckM2;1.0.2;default
attributes.tag: contamination score
attributes.value: 2.78
attributes.tag: environmental medium
attributes.value: aquatic
attributes.tag: geographic location (country and/or sea)
attributes.value: Pacific Ocean
attributes.tag: geographic location (latitude)
attributes.value: 22.75
attributes.tag: geographic location (longitude)
attributes.value: -158.0
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: marine plankton metagenome
attributes.tag: local environmental context
attributes.value: marine plankton biome
attributes.tag: metagenomic source
attributes.value: marine plankton metagenome
attributes.tag: project name
attributes.value: A time-resolved deep metagenomic survey of bacterioplankton from the ocean's surface to a depth of 1,000 m in the North Pacific Subtropical Gyre at Station ALOHA, collected from Hawaii Ocean Time-series (HOT) cruises from August 2010 through November 2017.
attributes.tag: sample derived from
attributes.value: SAMN05991710,SAMN05991682
attributes.tag: sample name
attributes.value: SRP092796_co3_879
attributes.tag: scientific_name
attributes.value: uncultured Lentisphaerales bacterium
attributes.tag: sequencing method
attributes.value: NextSeq 500
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach