title: Metagenome-assembled genome: binchicken_co315_74
organism: uncultured Planctomycetaceae bacterium
description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR7939969,SRR9997720 of study SRP162853.
attributes.tag: ENA first public
attributes.value: 2024-12-11
attributes.tag: INSDC center name
attributes.value: CMR
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: binchicken_co315_74
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaSPAdes;3.15.4;default
attributes.tag: binning parameters
attributes.value: coverage and kmer
attributes.tag: binning software
attributes.value: MetaBAT;2.15;default
attributes.tag: broad-scale environmental context
attributes.value: engineered
attributes.tag: collection date
attributes.value: not provided
attributes.tag: completeness score
attributes.value: 92.17
attributes.tag: completeness software
attributes.value: CheckM2;1.0.2;default
attributes.tag: contamination score
attributes.value: 1.16
attributes.tag: environmental medium
attributes.value: engineered
attributes.tag: geographic location (country and/or sea)
attributes.value: not applicable
attributes.tag: geographic location (latitude)
attributes.value: not provided
attributes.tag: geographic location (longitude)
attributes.value: not provided
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: activated sludge metagenome
attributes.tag: local environmental context
attributes.value: activated sludge biome
attributes.tag: metagenomic source
attributes.value: activated sludge metagenome
attributes.tag: project name
attributes.value: In this study, two combined nitritation and Anammox reactors with or without the addition of organics were operated. Effects of organics on nitrogen removal, biofilm formation and microbial community were investigated, and microbial interactions from QS and the role of QS were examined. In addition, the possible microbial cooperations in nitrogen removal and biofilm formation were clarified. These results could provide deep insights into microbial interactions from QS in the Anammox system.
attributes.tag: sample derived from
attributes.value: SAMN10141348,SAMN12606010
attributes.tag: sample name
attributes.value: binchicken_co315_74
attributes.tag: scientific_name
attributes.value: uncultured Planctomycetaceae bacterium
attributes.tag: sequencing method
attributes.value: Illumina MiSeq,Illumina NovaSeq 6000
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach