title: Metagenome-assembled genome: SRP272421_co1_615
organism: uncultured Bacteroidales bacterium
description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12261226,SRR12261227 of study SRP272421.
attributes.tag: ENA first public
attributes.value: 2024-12-11
attributes.tag: INSDC center name
attributes.value: CMR
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: SRP272421_co1_615
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaSPAdes;3.15.4;default
attributes.tag: binning parameters
attributes.value: coverage and kmer
attributes.tag: binning software
attributes.value: SemiBin2;2.0.2;default
attributes.tag: broad-scale environmental context
attributes.value: aquatic
attributes.tag: collection date
attributes.value: 2017-09-08
attributes.tag: completeness score
attributes.value: 96.29
attributes.tag: completeness software
attributes.value: CheckM2;1.0.2;default
attributes.tag: contamination score
attributes.value: 3.85
attributes.tag: environmental medium
attributes.value: aquatic
attributes.tag: geographic location (country and/or sea)
attributes.value: USA
attributes.tag: geographic location (latitude)
attributes.value: 43.099
attributes.tag: geographic location (longitude)
attributes.value: -89.405
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: freshwater metagenome
attributes.tag: local environmental context
attributes.value: freshwater biome
attributes.tag: metagenomic source
attributes.value: freshwater metagenome
attributes.tag: project name
attributes.value: Metagenomic survey of microbial communities during late anoxia in Lake Mendota
attributes.tag: sample derived from
attributes.value: SAMN15573538,SAMN15573537
attributes.tag: sample name
attributes.value: SRP272421_co1_615
attributes.tag: scientific_name
attributes.value: uncultured Bacteroidales bacterium
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 4000
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach