title: Metagenome-assembled genome: binchicken_co257_23
organism: uncultured Thermococci archaeon
description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR943312,SRR943313 of study SRP017582.
attributes.tag: ENA first public
attributes.value: 2024-12-11
attributes.tag: INSDC center name
attributes.value: CMR
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: binchicken_co257_23
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaSPAdes;3.15.4;default
attributes.tag: binning parameters
attributes.value: coverage and kmer
attributes.tag: binning software
attributes.value: MetaBAT2;2.15;default
attributes.tag: broad-scale environmental context
attributes.value: terrestrial
attributes.tag: collection date
attributes.value: 2011-07-21
attributes.tag: completeness score
attributes.value: 85.67
attributes.tag: completeness software
attributes.value: CheckM2;1.0.2;default
attributes.tag: contamination score
attributes.value: 0.87
attributes.tag: environmental medium
attributes.value: terrestrial
attributes.tag: geographic location (country and/or sea)
attributes.value: Canada
attributes.tag: geographic location (latitude)
attributes.value: 57.057175
attributes.tag: geographic location (longitude)
attributes.value: -111.599946
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: hydrocarbon metagenome
attributes.tag: local environmental context
attributes.value: hydrocarbon biome
attributes.tag: metagenomic source
attributes.value: hydrocarbon metagenome
attributes.tag: project name
attributes.value: Develop a database to describe and harness the genetic potential of the microorganisms, genes and biological processes that exist naturally in microbial communities in our oil sands and coal beds. By identifying the genes, bioprocesses and bacteria in the old sands and coal beds, we will improve our understanding of how methane in hydrocarbon resources is generated and identify the enzymes involved in the natural cracking of hydrocarbons that produce methane and carbon dioxide.
attributes.tag: sample derived from
attributes.value: SAMN01828451
attributes.tag: sample name
attributes.value: binchicken_co257_23
attributes.tag: scientific_name
attributes.value: uncultured Thermococci archaeon
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach