title: Metagenome-assembled genome: binchicken_co344_25
organism: uncultured Hyphomicrobiales bacterium
description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR7094833 of study SRP144376.
attributes.tag: ENA first public
attributes.value: 2024-12-11
attributes.tag: INSDC center name
attributes.value: CMR
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: binchicken_co344_25
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: MEGAHIT;1.2.9;default
attributes.tag: binning parameters
attributes.value: coverage and kmer
attributes.tag: binning software
attributes.value: MetaBAT2;2.15;default
attributes.tag: broad-scale environmental context
attributes.value: terrestrial
attributes.tag: collection date
attributes.value: 2017-05-24
attributes.tag: completeness score
attributes.value: 94.51
attributes.tag: completeness software
attributes.value: CheckM2;1.0.2;default
attributes.tag: contamination score
attributes.value: 2.11
attributes.tag: environmental medium
attributes.value: terrestrial
attributes.tag: geographic location (country and/or sea)
attributes.value: USA
attributes.tag: geographic location (latitude)
attributes.value: 42.48101600
attributes.tag: geographic location (longitude)
attributes.value: -72.17834300
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: soil metagenome
attributes.tag: local environmental context
attributes.value: soil biome
attributes.tag: metagenomic source
attributes.value: soil metagenome
attributes.tag: project name
attributes.value: Forest soil from Barre Woods Harvard Forest LTER site was incubated at 10C with heavy water. Sample is from a control plot at ambient soil temperature, organic horizon - top 4cm of soil
attributes.tag: sample derived from
attributes.value: SAMN08778041
attributes.tag: sample name
attributes.value: binchicken_co344_25
attributes.tag: scientific_name
attributes.value: uncultured Hyphomicrobiales bacterium
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2500
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach