title: Oral 16S from Puerto Ricans individuals with and without COVID.19; 14762.COV.T3.659
organism: human oral metagenome
description: human saliva
attributes.tag: ENA first public
attributes.value: 2025-11-26
attributes.tag: INSDC center name
attributes.value: UCSDMI
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: qiita_sid_14762:14762.COV.T3.659
attributes.tag: adjusted_days_btw_visits
attributes.value: 77
attributes.tag: age
attributes.value: 38
attributes.tag: altitud
attributes.value: not applicable
attributes.tag: anal_fecal_samples
attributes.value: Yes
attributes.tag: anonymized_name
attributes.value: COV_T3_659
attributes.tag: antibiotics_last_2months
attributes.value: Yes
attributes.tag: any_mucosa_symptom
attributes.value: Yes
attributes.tag: are_you_lactating_
attributes.value: not provided
attributes.tag: balance_loss
attributes.value: No
attributes.tag: blood_samples
attributes.value: Yes
attributes.tag: bmi
attributes.value: 28.79332073
attributes.tag: bronchial_asthma
attributes.value: No
attributes.tag: chest_pain_thigtness
attributes.value: No
attributes.tag: collection date
attributes.value: 2021-05-04
attributes.tag: collection_date
attributes.value: 2021-05-04
attributes.tag: collection_timestamp
attributes.value: 2021-05-04
attributes.tag: concentration_memory_problems
attributes.value: No
attributes.tag: conjuntivitis
attributes.value: No
attributes.tag: continuos_symptoms
attributes.value: not provided
attributes.tag: country
attributes.value: Puerto Rico
attributes.tag: covid19_ever
attributes.value: Yes
attributes.tag: covid19_vaccinaed_ever
attributes.value: Yes
attributes.tag: covid19_vaccinaed_ever_adj
attributes.value: Yes
attributes.tag: covid_19_vaccine
attributes.value: Yes
attributes.tag: covid_casos_control_analysis
attributes.value: not provided
attributes.tag: covid_consensus
attributes.value: Negative
attributes.tag: covid_consensus_covid19_ever
attributes.value: Negative_Yes
attributes.tag: covid_first_day
attributes.value: 14/08/20
attributes.tag: covid_last_day
attributes.value: 10/09/20
attributes.tag: covid_positive
attributes.value: 0
attributes.tag: covid_symp_still
attributes.value: not provided
attributes.tag: crohnsdisease
attributes.value: No
attributes.tag: days_at_rt
attributes.value: 0
attributes.tag: days_btw_visits
attributes.value: 77
attributes.tag: days_from_dose_to_visit
attributes.value: 140
attributes.tag: depressed
attributes.value: No
attributes.tag: depth
attributes.value: not applicable
attributes.tag: diabetes_type_1
attributes.value: No
attributes.tag: diabetes_type_2
attributes.value: No
attributes.tag: diagnose_not_available
attributes.value: No
attributes.tag: diagnose_not_known
attributes.value: No
attributes.tag: diarrhea
attributes.value: No
attributes.tag: diet_affected_by_covid
attributes.value: the_diet_is_the_same
attributes.tag: difficulty_breathing
attributes.value: No
attributes.tag: discoloration_fingers_toes
attributes.value: No
attributes.tag: discomfort
attributes.value: No
attributes.tag: dizziness
attributes.value: Yes
attributes.tag: dna_extracted
attributes.value: TRUE
attributes.tag: dry_cough
attributes.value: No
attributes.tag: elevation
attributes.value: 0
attributes.tag: empo_1
attributes.value: Host.associated
attributes.tag: empo_2
attributes.value: Host.associated (non.saline)
attributes.tag: empo_3
attributes.value: Animal secretion
attributes.tag: empo_4
attributes.value: saliva
attributes.tag: enjoyment
attributes.value: Sometimes
attributes.tag: env_biome
attributes.value: urban biome
attributes.tag: env_feature
attributes.value: human.associated habitat
attributes.tag: env_material
attributes.value: saliva material
attributes.tag: env_package
attributes.value: human-oral
attributes.tag: ever_cancer
attributes.value: No
attributes.tag: ever_periodontal_disease
attributes.value: No
attributes.tag: excessive_tearing
attributes.value: No
attributes.tag: fatigue
attributes.value: Yes
attributes.tag: fear
attributes.value: No
attributes.tag: fever_higher_than_38
attributes.value: No
attributes.tag: first_dose_date_
attributes.value: 15/12/20
attributes.tag: geo_loc_name
attributes.value: Puero Rico:San Juan
attributes.tag: geographic location (country and/or sea)
attributes.value: Puerto Rico
attributes.tag: have_you_been_intub_or_ventilat
attributes.value: not provided
attributes.tag: headaches
attributes.value: No
attributes.tag: hepatitis_b
attributes.value: No
attributes.tag: hepatitis_c
attributes.value: No
attributes.tag: hepatitis_c_or_b
attributes.value: No
attributes.tag: hiv
attributes.value: No
attributes.tag: host_age
attributes.value: 38
attributes.tag: host_age_units
attributes.value: years
attributes.tag: host_body_habitat
attributes.value: UBERON:saliva
attributes.tag: host_body_mass_index
attributes.value: 28.79332073
attributes.tag: host_body_product
attributes.value: UBERON:saliva
attributes.tag: host_body_site
attributes.value: UBERON:saliva
attributes.tag: host_common_name
attributes.value: human
attributes.tag: host_height
attributes.value: not provided
attributes.tag: host_height_units
attributes.value: not provided
attributes.tag: host_life_stage
attributes.value: adult
attributes.tag: host_scientific_name
attributes.value: Homo sapiens
attributes.tag: host_sex
attributes.value: male
attributes.tag: host_subject_id
attributes.value: P_659
attributes.tag: host_taxid
attributes.value: 9606
attributes.tag: host_weight
attributes.value: not provided
attributes.tag: host_weight_units
attributes.value: not provided
attributes.tag: hypertension
attributes.value: No
attributes.tag: incubated_ventilated
attributes.value: No
attributes.tag: infection_treated
attributes.value: home
attributes.tag: insomnia
attributes.value: No
attributes.tag: intake_of_fluids_due_to_covid
attributes.value: I_take_the_same
attributes.tag: irritated_angry
attributes.value: No
attributes.tag: isolate_scientific_name
attributes.value: not applicable
attributes.tag: isolate_strain_taxonomy_id
attributes.value: not applicable
attributes.tag: joint_pain
attributes.value: No
attributes.tag: latitud
attributes.value: 18.39371441
attributes.tag: longitud
attributes.value: .66.0566371992543
attributes.tag: loss_of_self_esteem
attributes.value: No
attributes.tag: loss_of_smell
attributes.value: No
attributes.tag: loss_of_taste
attributes.value: No
attributes.tag: low_energy
attributes.value: Yes
attributes.tag: med_or_recr_cannabis_curr
attributes.value: No
attributes.tag: medical_cannabis_curr
attributes.value: No
attributes.tag: municipality
attributes.value: Carolina
attributes.tag: muscle_pain
attributes.value: No
attributes.tag: nasal_congestion
attributes.value: Yes
attributes.tag: nicotine_cigarret_curr
attributes.value: No
attributes.tag: non_nicotine_cigarret_curr
attributes.value: No
attributes.tag: oral_samples
attributes.value: Yes
attributes.tag: patient_id
attributes.value: P_659
attributes.tag: physical_activity_sports
attributes.value: No
attributes.tag: physical_specimen_location
attributes.value: Godoy lab San Juan PR
attributes.tag: physical_specimen_remaning
attributes.value: FALSE
attributes.tag: poor_appetite_or_overeat
attributes.value: No
attributes.tag: pregnant
attributes.value: No
attributes.tag: pregnant_weeks
attributes.value: not applicable
attributes.tag: prob_or_yogurt_last3months
attributes.value: not provided
attributes.tag: qiita_sample_type
attributes.value: saliva
attributes.tag: rash
attributes.value: No
attributes.tag: recently_hospitalized
attributes.value: No
attributes.tag: recreac_cannabis_curr
attributes.value: No
attributes.tag: rhinitis
attributes.value: No
attributes.tag: sample name
attributes.value: qiita_sid_14762:14762.COV.T3.659
attributes.tag: sample_type
attributes.value: saliva
attributes.tag: scientific_name
attributes.value: human oral metagenome
attributes.tag: second_dose_date_
attributes.value: 04_01_2021
attributes.tag: sex
attributes.value: male
attributes.tag: shacking_chills
attributes.value: No
attributes.tag: side_effects
attributes.value: No
attributes.tag: smoking_curr_vap_cigar_w_and_wo_nicot
attributes.value: No
attributes.tag: sputum_phlegm
attributes.value: No
attributes.tag: stroke
attributes.value: No
attributes.tag: suspect_of_covid_19
attributes.value: No
attributes.tag: throat_pain
attributes.value: Yes
attributes.tag: tremors
attributes.value: No
attributes.tag: trouble_sleeping_or_sleepy
attributes.value: Yes
attributes.tag: trouble_speaking
attributes.value: No
attributes.tag: tube_id
attributes.value: COV_T3_659
attributes.tag: vaccine_brand
attributes.value: Phizer_BioNTech
attributes.tag: vaccine_doses
attributes.value: two_doses
attributes.tag: vaccine_sideeffect_arm_pain
attributes.value: not provided
attributes.tag: vaccine_sideeffect_body_ache
attributes.value: not provided
attributes.tag: vaccine_sideeffect_chills
attributes.value: not provided
attributes.tag: vaccine_sideeffect_diarrhea
attributes.value: not provided
attributes.tag: vaccine_sideeffect_fever
attributes.value: not provided
attributes.tag: vaccine_sideeffect_headache
attributes.value: not provided
attributes.tag: vaccine_sideeffect_joint_pain
attributes.value: not provided
attributes.tag: vaccine_sideeffect_nausea
attributes.value: not provided
attributes.tag: vaccine_sideeffect_tiredness
attributes.value: not provided
attributes.tag: vaccine_sideeffect_vomiting
attributes.value: not provided
attributes.tag: vaping_curr
attributes.value: No
attributes.tag: visit_number
attributes.value: Third_Visit
attributes.tag: vomiting
attributes.value: No
attributes.tag: worry
attributes.value: No