title: bc9da805-a3f0-4227-b5cd-b48c272b79f1-asg-MAGScoT_cleanbin_000019
organism: Gemmata sp.
attributes.tag: 16S recovery software
attributes.value: PROKKA (version 1.14.6)
attributes.tag: 16s recovered
attributes.value: Yes
attributes.tag: ENA first public
attributes.value: 2025-03-19
attributes.tag: GAL
attributes.value: Royal Botanic Garden Edinburgh
attributes.tag: GAL_sample_id
attributes.value: NOT PROVIDED
attributes.tag: INSDC center name
attributes.value: Tree of Life Programme
attributes.tag: INSDC status
attributes.value: public
attributes.tag: MAG coverage software
attributes.value: Minimap2 (version 2.28)
attributes.tag: Submitter Id
attributes.value: bc9da805-a3f0-4227-b5cd-b48c272b79f1
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaMDBG (version 1.0)
attributes.tag: barcoding center
attributes.value: ROYAL BOTANIC GARDEN EDINBURGH
attributes.tag: binning parameters
attributes.value: coverage; graph; hic-mapping
attributes.tag: binning software
attributes.value: MAGScoT (version 1.1.0); MetaBat (version 2.2.17); bin3C (version 0.3.3); MaxBin (version 2.2.7); MetaTOR (version 1.3.2)
attributes.tag: broad-scale environmental context
attributes.value: terrestrial biome
attributes.tag: collected_by
attributes.value: DAVID BELL | DAVID LONG
attributes.tag: collecting institution
attributes.value: ROYAL BOTANIC GARDEN EDINBURGH
attributes.tag: collection date
attributes.value: 2021-07-05
attributes.tag: completeness score
attributes.value: 95.12
attributes.tag: completeness software
attributes.value: checkM (version 1.2.2); checkM_DB (release 2015-01-16)
attributes.tag: contamination score
attributes.value: 2.33
attributes.tag: elevation
attributes.value: 174
attributes.tag: environmental medium
attributes.value: adult bryophyte tissue
attributes.tag: geographic location (country and/or sea)
attributes.value: United Kingdom
attributes.tag: geographic location (latitude)
attributes.value: 56.66
attributes.tag: geographic location (longitude)
attributes.value: -4.98
attributes.tag: geographic location (region and locality)
attributes.value: Main Argyll | Glencoe | foot of Allt Coire Gabhail
attributes.tag: habitat
attributes.value: Open grassy hillside; amongst heather beneath large boulder
attributes.tag: host life stage
attributes.value: gametophyte
attributes.tag: host scientific name
attributes.value: Leucobryum glaucum
attributes.tag: host sex
attributes.value: not collected
attributes.tag: host taxid
attributes.value: 94688
attributes.tag: identified_by
attributes.value: DAVID BELL | DAVID LONG
attributes.tag: identifier_affiliation
attributes.value: ROYAL BOTANIC GARDEN EDINBURGH
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: Bryophyte: Leucobryum glaucum
attributes.tag: local environmental context
attributes.value: forest biome
attributes.tag: metagenomic source
attributes.value: plant metagenome
attributes.tag: number of standard tRNAs extracted
attributes.value: 65
attributes.tag: organism part
attributes.value: WHOLE ORGANISM
attributes.tag: project name
attributes.value: DTOL
attributes.tag: sample derived from
attributes.value: SAMEA117843181
attributes.tag: sample has part
attributes.value: SAMEA10332512
attributes.tag: sample name
attributes.value: bc9da805-a3f0-4227-b5cd-b48c272b79f1
attributes.tag: scientific_name
attributes.value: Gemmata sp.
attributes.tag: sequencing method
attributes.value: Pacbio Sequel II
attributes.tag: specimen_id
attributes.value: EDTOL02007
attributes.tag: specimen_voucher
attributes.value: NOT PROVIDED
attributes.tag: tRNA extraction software
attributes.value: PROKKA (version 1.14.6)
attributes.tag: taxonomic classification
attributes.value: GTDB-TK (version 2.4.0); GTDB (release 214)
attributes.tag: taxonomic identity marker
attributes.value: taxonomic classification fully defined by topology
attributes.tag: tolid
attributes.value: cbLeuGlau1.Gemmata_sp_1