title: Metagenome-assembled genome: SRP072547_co2_165
organism: uncultured Bacteriovoracaceae bacterium
description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR3311151,SRR3311156 of study SRP072547.
attributes.tag: ENA first public
attributes.value: 2024-12-11
attributes.tag: INSDC center name
attributes.value: CMR
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: SRP072547_co2_165
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaSPAdes;3.15.4;default
attributes.tag: binning parameters
attributes.value: coverage and kmer
attributes.tag: binning software
attributes.value: MetaBAT2;2.15;default
attributes.tag: broad-scale environmental context
attributes.value: terrestrial
attributes.tag: collection date
attributes.value: 2012-01
attributes.tag: completeness score
attributes.value: 78.02
attributes.tag: completeness software
attributes.value: CheckM2;1.0.2;default
attributes.tag: contamination score
attributes.value: 2.67
attributes.tag: environmental medium
attributes.value: terrestrial
attributes.tag: geographic location (country and/or sea)
attributes.value: Mexico
attributes.tag: geographic location (latitude)
attributes.value: 19.25
attributes.tag: geographic location (longitude)
attributes.value: -97.24
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: stromatolite metagenome
attributes.tag: local environmental context
attributes.value: stromatolite biome
attributes.tag: metagenomic source
attributes.value: stromatolite metagenome
attributes.tag: project name
attributes.value: We performed a comparative metagenomic analysis of microbialite samples along a depth gradient to characterise the functional profile of the microbialite-associated microbial communities.
attributes.tag: sample derived from
attributes.value: SAMN04565681
attributes.tag: sample name
attributes.value: SRP072547_co2_165
attributes.tag: scientific_name
attributes.value: uncultured Bacteriovoracaceae bacterium
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2000
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach