title: Metagenome-assembled genome: SRP321284_co1_23
organism: uncultured Anaerolineaceae bacterium
description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR14640484,SRR14640486 of study SRP321284.
attributes.tag: ENA first public
attributes.value: 2024-12-11
attributes.tag: INSDC center name
attributes.value: CMR
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: SRP321284_co1_23
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaSPAdes;3.15.4;default
attributes.tag: binning parameters
attributes.value: coverage and kmer
attributes.tag: binning software
attributes.value: MetaBAT2;2.15;default
attributes.tag: broad-scale environmental context
attributes.value: terrestrial
attributes.tag: collection date
attributes.value: 2020-01-10
attributes.tag: completeness score
attributes.value: 89.34
attributes.tag: completeness software
attributes.value: CheckM2;1.0.2;default
attributes.tag: contamination score
attributes.value: 2.64
attributes.tag: environmental medium
attributes.value: terrestrial
attributes.tag: geographic location (country and/or sea)
attributes.value: India
attributes.tag: geographic location (latitude)
attributes.value: 21.9497
attributes.tag: geographic location (longitude)
attributes.value: 89.1833
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: sediment metagenome
attributes.tag: local environmental context
attributes.value: sediment biome
attributes.tag: metagenomic source
attributes.value: sediment metagenome
attributes.tag: project name
attributes.value: GHGs emitted from mangrove sediments or rice rhizospheric soil through different microbial processes like methanogenesis, nitrification, denitrification etc. So the microbial diversity of different groups were directly correlated with the GHGs emission.
attributes.tag: sample derived from
attributes.value: SAMN19328051,SAMN19328049
attributes.tag: sample name
attributes.value: SRP321284_co1_23
attributes.tag: scientific_name
attributes.value: uncultured Anaerolineaceae bacterium
attributes.tag: sequencing method
attributes.value: Illumina HiSeq 2500
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach