title: Metagenome-assembled genome: SRP292972_co3_116
organism: uncultured Myxococcales bacterium
description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR14271332,SRR14271336 of study SRP292972.
attributes.tag: ENA first public
attributes.value: 2024-12-11
attributes.tag: INSDC center name
attributes.value: CMR
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: SRP292972_co3_116
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaSPAdes;3.15.4;default
attributes.tag: binning parameters
attributes.value: coverage and kmer
attributes.tag: binning software
attributes.value: VAMB;3.0.2;default
attributes.tag: broad-scale environmental context
attributes.value: engineered
attributes.tag: collection date
attributes.value: 2016-08
attributes.tag: completeness score
attributes.value: 80.19
attributes.tag: completeness software
attributes.value: CheckM2;1.0.2;default
attributes.tag: contamination score
attributes.value: 3.12
attributes.tag: environmental medium
attributes.value: engineered
attributes.tag: geographic location (country and/or sea)
attributes.value: USA
attributes.tag: geographic location (latitude)
attributes.value: 37.23
attributes.tag: geographic location (longitude)
attributes.value: -80.41
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: bioreactor metagenome
attributes.tag: local environmental context
attributes.value: bioreactor biome
attributes.tag: metagenomic source
attributes.value: bioreactor metagenome
attributes.tag: project name
attributes.value: Reclaiming wastewater treatment plant effluent for reuse is essential for achieving water sustainability. This project aimed to improve understanding of treatment and management requirements for reclaimed water distribution by running a long-term simulated reclaimed water distribution system experiment. Metagenomic samples were collected from water, biofilm and sediment in the distribution system and analyzed for community structure, function and presence of antibiotic resistance genes and pathogens.
attributes.tag: sample derived from
attributes.value: SAMN18753105,SAMN18753101
attributes.tag: sample name
attributes.value: SRP292972_co3_116
attributes.tag: scientific_name
attributes.value: uncultured Myxococcales bacterium
attributes.tag: sequencing method
attributes.value: NextSeq 550
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach