organism: Bos taurus
attributes.tag: isolate
attributes.value: 102
attributes.tag: breed
attributes.value: Black
attributes.tag: ecotype
attributes.value: Solid
attributes.tag: dev_stage
attributes.value: Feedlot
attributes.tag: collection_date
attributes.value: 2018-04-19
attributes.tag: geo_loc_name
attributes.value: USA: Western Great Plains
attributes.tag: sex
attributes.value: male
attributes.tag: tissue
attributes.value: Skin
attributes.tag: biomaterial_provider
attributes.value: Michael Heaton, USDA, ARS, USMARC
attributes.tag: collected_by
attributes.value: Michael Heaton, USDA, ARS, USMARC
attributes.tag: disease
attributes.value: Congestive Heart Failure
attributes.tag: health_state
attributes.value: Not affected
attributes.tag: isolation_source
attributes.value: N
attributes.tag: library_id
attributes.value: 100647
attributes.tag: title
attributes.value: Association of JMJD1C with reduced risk of bovine congestive heart failure in feedlot cattle
attributes.tag: library_strategy
attributes.value: WGS
attributes.tag: library_source
attributes.value: GENOMIC
attributes.tag: library_selection
attributes.value: size fractionation
attributes.tag: library_layout
attributes.value: paired
attributes.tag: platform
attributes.value: ILLUMINA
attributes.tag: instrument_model
attributes.value: NextSeq 500
attributes.tag: design_description
attributes.value: Dynamic pools of indexed libraries were sequenced with massively parallel sequencing machines (either NextSeq500 or NextSeq2000, Illumina Inc.) with the appropriate kits producing 2 150bp paired-end reads. Pooled samples were sequenced until a minimum of 40 Gb of data was collected with greater than Q20 quality for each animal, thereby producing at least 13.3-fold mapped read coverage for each index (90% of reads mapped to a 2.7Gb reference genome).
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