title: Lake Zurich epilimnion metagenome assembled genome (MAG)
description: MAG assembled from Nanopore long reads, corrected with Nanopore and Illumina short reads, binned by multiple short-read coverageâ€“based methods, and refined using binning refinement software.
attributes.tag: assembly software
attributes.value: Flye v2.9.3, --meta --nano-hq, default parameters otherwise
attributes.tag: broad-scale environmental context
attributes.value: aquatic ecosystem [ENVO:01001787]
attributes.tag: collection date
attributes.value: 2021-04-12
attributes.tag: sample derived from
attributes.value: ERS26053082
attributes.tag: geographic location (longitude)
attributes.value: 8.55861111
attributes.tag: binning parameters
attributes.value: Metabat2 default with coverage, COMEbin default with coverage, Binette default
attributes.tag: contamination score
attributes.value: 3.6
attributes.tag: tRNA extraction software
attributes.value: tRNAscan-SE v2.0.5
attributes.tag: number of standard tRNAs extracted
attributes.value: 10
attributes.tag: 16S recovery software
attributes.value: Barrnap v0.9
attributes.tag: completeness software
attributes.value: Checkm2 v1.0.2
attributes.tag: geographic location (country and/or sea)
attributes.value: Switzerland
attributes.tag: binning software
attributes.value: Metabat2 v2.16, COMEbin v1.0.4, Binette v1.0.1
attributes.tag: organism
attributes.value: uncultured Burkholderiales bacterium
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach
attributes.tag: completeness score
attributes.value: 58.83
attributes.tag: environmental medium
attributes.value: lake water [ENVO:04000007]
attributes.tag: geographic location (latitude)
attributes.value: 47.3252778
attributes.tag: scientific_name
attributes.value: uncultured Burkholderiales bacterium
attributes.tag: local environmental context
attributes.value: large freshwater lake biome [ENVO:00000891]
attributes.tag: metagenomic source
attributes.value: lake water metagenome
attributes.tag: project name
attributes.value: LZ-BITS
attributes.tag: 16s recovered
attributes.value: No
attributes.tag: isolation_source
attributes.value: Lake Zurich