title: Metagenome-assembled genome: DLUG22-1_SAMEA5958375_MAG_00000077
description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome generated from the metagenomic assembly ERZ23491676 of study PRJEB72961.
attributes.tag: ENA first public
attributes.value: 2026-04-29
attributes.tag: INSDC center name
attributes.value: ETH ZURICH
attributes.tag: INSDC status
attributes.value: public
attributes.tag: Submitter Id
attributes.value: DLUG22-1_SAMEA5958375_MAG_00000077
attributes.tag: assembly quality
attributes.value: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
attributes.tag: assembly software
attributes.value: metaSPAdes 3.14
attributes.tag: binning parameters
attributes.value: metabat2 -i assembly.fasta -a coabudance.depth --minContig 2000 --maxEdges 500 -x 1 --minClsSize 200000 --saveCls -v
attributes.tag: binning software
attributes.value: MetaBAT2 + co-abundance
attributes.tag: broad-scale environmental context
attributes.value: not provided
attributes.tag: collection date
attributes.value: 2012-04-12
attributes.tag: completeness score
attributes.value: 100
attributes.tag: completeness software
attributes.value: Anvio 7.1
attributes.tag: contamination score
attributes.value: 0.0
attributes.tag: environmental medium
attributes.value: not provided
attributes.tag: geographic location (country and/or sea)
attributes.value: Atlantic Ocean
attributes.tag: geographic location (latitude)
attributes.value: -47.94120000
attributes.tag: geographic location (longitude)
attributes.value: -61.92270000
attributes.tag: investigation type
attributes.value: metagenome-assembled genome
attributes.tag: isolation_source
attributes.value: marine metagenome
attributes.tag: local environmental context
attributes.value: not provided
attributes.tag: metagenomic source
attributes.value: marine metagenome
attributes.tag: project name
attributes.value: The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) dataset PRJEB34453. The assembly was generated with metaSPAdes (Nurk et al., 2017) and metagenome-assembled genomes (MAGs) were reconstructed using MetaBAT2 (Kang et al., 2019) with contig coverage information across multiple samples. Methods are described in Paoli et al., 2022 and Ruscheweyh et al., 2022.
attributes.tag: sample derived from
attributes.value: SAMEA5958375
attributes.tag: sample name
attributes.value: DLUG22-1_SAMEA5958375_MAG_00000077
attributes.tag: scientific_name
attributes.value: Pseudomonadales bacterium
attributes.tag: sequencing method
attributes.value: ILLUMINA
attributes.tag: taxonomic identity marker
attributes.value: multi-marker approach