16S recovery software
Barrnap v0.9
16s recovered
No
ENA first public
2026-04-30
INSDC center name
MiEL
INSDC status
public
Submitter Id
NZE17MAR2102.MAG_8307
assembly software
Flye v2.9.3, --meta --nano-hq, default parameters otherwise
binning parameters
Metabat2 default with coverage, COMEbin default with coverage, Binette default
binning software
Metabat2 v2.16, COMEbin v1.0.4, Binette v1.0.1
broad-scale environmental context
aquatic ecosystem [ENVO:01001787]
collection date
2021-03-17
completeness score
85.51
completeness software
Checkm2 v1.0.2
contamination score
2.91
environmental medium
lake water [ENVO:04000007]
geographic location (country and/or sea)
Switzerland
geographic location (latitude)
47.3252778
geographic location (longitude)
8.55861111
isolation_source
Lake Zurich
local environmental context
large freshwater lake biome [ENVO:00000891]
metagenomic source
lake water metagenome
number of standard tRNAs extracted
30
project name
LZ-BITS
sample derived from
ERS26053088
sample name
NZE17MAR2102.MAG_8307
scientific_name
Rickettsia typhi
tRNA extraction software
tRNAscan-SE v2.0.5
taxonomic identity marker
multi-marker approach