SO245-07-01_300
marine metagenome
16s rRNA tag sequencing data from samples taken throughout the water column (20 - 5000m depth) along the SO245 Ultrapac cruise which crossed through the South Pacific Gyre. Samples were samples from a CTD and directly filtered on 0,2µm polycarbondate filters. DNA extraction, PCR, sequencing and data analysis were all carried out on-board directly after sampling. Samples were not frozen at any time.
ENA-FIRST-PUBLIC
2018-08-23T17:02:03Z
ENA-LAST-UPDATE
2018-04-13T11:07:04Z
External Id
SAMEA104224609
INSDC center name
GFBIO
INSDC first public
2018-08-23T17:02:03Z
INSDC last update
2018-04-13T11:07:04Z
INSDC status
public
Submitter Id
5107:8816016b-ad0d-478c-8d45-7c7f1ead80f1
broker name
GFBIO
collection date
2016-01-06
environment (biome)
oceanic epipelagic zone biome [ENVO:01000035]
environment (feature)
oceanic zone [ENVO:01000033]|oceanic gyre [ENVO:01000074]
environment (material)
sea water [ENVO:00002149]|oligotrophic water [ENVO:00002223]
environmental package
water
geographic location (country and/or sea)
Atlantic Ocean
geographic location (depth)
300
geographic location (latitude)
-25.982
geographic location (longitude)
-114.009
investigation type
mimarks-survey
pangaea event label
SO245_07-04
project name
SO245 On-board Sequencing and Data Analysis. MPG funded research project.
sample name
5107:8816016b-ad0d-478c-8d45-7c7f1ead80f1
scientific_name
marine metagenome
sequencing method
Ion Torrent PGM
submitted to INSDC
true
target gene
16S rRNA
target subfragment
V3-V4
water environmental package
water