uncultured Planctomycetota bacterium
seawater
ENA-FIRST-PUBLIC
2011-07-15T17:00:21Z
ENA-KEYWORD
GSC, MIxS, MIMARKS
ENA-LAST-UPDATE
2018-03-09T09:52:24Z
External Id
SAMEA1706074
INSDC center name
MPI BREMEN
INSDC first public
2011-07-15T17:00:21Z
INSDC last update
2018-03-09T09:52:24Z
INSDC status
public
Standard_compliance
GSC:MIENS_Sv2.1
Submitter Id
TF
ammonium
0.01
amount or size of sample collected
5
collection date
2007-02-23
environment
seawater
geographic location (altitude/elevation)
0
geographic location (country)
Germany
geographic location (depth)
1
geographic location (latitudeandlongitude)
54.1883 N 7.9 E
investigation type
miens-survey
library reads sequenced
96
library size
192
library vector
pGEM-T Easy
nitrate
22.29
nitrite
0.82
organism count
Centrales=4760; Pennales=17148; Planctomycetes=29200000
pcr conditions
initial denaturation:94degC_4min,94degC_1min,annealing:59degC_2min,elongation:72degC_1.5min,N (33),extension: 72degC_10min
phosphate
1.24
salinity
33.241
sample collection device or method
bottles
sample material processing
filtration
sample name
TF
scientific_name
uncultured planctomycete
sequence quality check
manual
sequencing method
Sanger
silicate
6.26
target gene
16S rRNA
temperature
6.1