human gut metagenome
collection_date
2016
env_biome
stool
env_feature
stool
env_material
stool
geo_loc_name
USA: Rochester, MN
host
Homo sapiens
lat_lon
N/A
Age
36
Sex
male
BMI
27.4650005
Diagnosis
IBD-A
Disease Duration
0
All Immunosupressants
1
Topical Immunosupressants
0
5-ASA
0
5-ASA Used
0
5-ASA Formulation
0
5-ASA Dose
0
Steroids
1
Topical Steroids
0
Steroid Used
Prednisone
Steroid Dose (mg daily)
30
Immunomodulators
1
AZA or 6-MP
0
AZA or 6-MP Used
0
AZA or 6-MP Dose (mg daily)
0
MTX
1
MTX (weekly dose in mg)
25
Biologics
1
TNF-_ Inhibitors
1
TNF-_ Inhibitor Used
IFX
TNF-_ Inhibitor Dose in mg/kg
5
Dose in mg/kg/week
0.625
Anti-integrin Antibodies
0
Anti-integrin Antibody Type
0
Anti-integrin Antibody Dose (mg)
0
Anti-integrin Antibody Dose (mg/week)
0
Ustekinumab
0
Ustekinumab Dose (mg)
0
Ustekinumab Dose (mg/week)
0
DMARDS
1
Hydroxychloroquine
0
Hydroxychloroquine Dose Daily
0
Leflunomide
0
Leflunomide Dose (mg)
0
Abatacept
0
Abatacept Dose (mg)
0
Abatacept Dose (mg/week)
0
Rituximab
0
Rituximab Dose (mg)
0
Rituximab Dose (mg/week)
0
Tofacitinib
0
Tofacitinib Dose (mg)
0
Other Immunosupressants
0
Other Immunosupressant Type
0
Other Immunosupressant Dose (mg)
0
Other Immunosupressant Frequency
0
Smoking
0
Alcohol
0
Antibiotics
0
Probiotics
0
Probiotic Type
0
IBD Diagnosis
UC
Montreal CD Age
NA
Montreal CD Location
NA
Montreal CD Location Upper GI
NA
Montreal CD Behavior
NA
Montreal CD Behavior Perianal Disease
0
Montreal UC Extent
E2
Montreal UC Severity
S0
Harvey Bradshaw Index
NA
Harvey Bradshaw Index Category
NA
SCCAI
0
SCCAI Category
Remission
DAS
NA
DAS Category
NA
CRP
missing
ESR
missing
RF Positivity
NA
RF Titer
NA
ACPA Positivity
NA
ACPA Titer
NA
Bowel Surgery
0
Colectomy
0
Colectomy Extent (1 = total, 2 = partial)
0
Small Bowel Resection
0
Small Bowel Resections
0
Small Bowel Resection Length (cm)
0
Pouchitis (1 = acute, 2 = chronic)
0
mPDAI
0
mPDAI Category
0
Overall Severity
Remission
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.human-gut