MIGS Cultured Bacterial/Archaeal sample from Atopobium vaginae DSM 15829
Fannyhessea vaginae DSM 15829
Atopobium vaginae DSM 15829
strain
DSM 15829
misc_param: HMP supersite
urogenital_tract
project_type
Reference Genome
estimated_size
1433000
culture-collection
ATCC:BAA-55
feature
Homo sapiens-associated habitat [ENVO:00009003]
investigation_type
missing
host taxid
9606
nucleic acid extraction
not determined
finishing strategy (depth of coverage)
Level 3: Improved-High-Quality Draft21.65x;61
material
biological product [ENVO:02000043]
sop
http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
num_replicons
not determined
ref_biomaterial
not determined
geo_loc_name
not determined
biome
terrestrial biome [ENVO:00000446]
lat lon
not determined
env_package
missing
collection date
not determined
specific host
Homo sapiens
sequencing method
454-GS-FLX, Illumina, Sanger
assembly
Newbler v. 2.0.01.12
isol_growth_condt
not determined
misc_param: HMP body site
Vaginal
source_mat_id
ATCC BAA-55, DSM 15829, CCUG 38953, CIP 106431
project_name
Atopobium vaginae DSM 15829
isolation-source
vagina
type-material
type strain of Atopobium vaginae
BioSampleModel
MIGS.ba