uncultured Planctomycetota bacterium
seawater
ENA-FIRST-PUBLIC
2011-07-15T17:00:21Z
ENA-KEYWORD
GSC, MIxS, MIMARKS
ENA-LAST-UPDATE
2018-03-09T09:56:59Z
External Id
SAMEA1706075
INSDC center name
MPI BREMEN
INSDC first public
2011-07-15T17:00:21Z
INSDC last update
2018-03-09T09:56:59Z
INSDC status
public
Standard_compliance
GSC:MIENS_Sv2.1
Submitter Id
AF
ammonium
0.25
amount or size of sample collected
5
collection date
2007-07-24
environment
seawater
geographic location (altitude/elevation)
0
geographic location (country)
Germany
geographic location (depth)
1
geographic location (latitudeandlongitude)
54.1883 N 7.9 E
investigation type
miens-survey
library reads sequenced
96
library size
192
library vector
pGEM-T Easy
nitrate
0.85
nitrite
0.02
organism count
Centrales=329722; Pennales=9139; Planctomycetes=57100000
pcr conditions
initial denaturation:94degC_4min,94degC_1min,annealing:59degC_2min,elongation:72degC_1.5min,N (33),extension: 72degC_10min
phosphate
0.36
salinity
not recorded
sample collection device or method
bottles
sample material processing
filtration
sample name
AF
scientific_name
uncultured planctomycete
sequence quality check
manual
sequencing method
Sanger
silicate
1.17
target gene
16S rRNA
temperature
18