Generic sample from mouse gut metagenome
mouse gut metagenome
pool sample: 16S rRNA gene amplicons from a mouse model with low complexity gut microbiota to study colonization resistance             BARCODE_INDEX = {1:TAGC, 2:TCGA, 3:TCGC, 4:TAGA, 5:TGCA, 6:ATCG, 7:AGCT, 8:AGCG, 9:ATCT, 10:ACGT, 11:GATC, 12:GCTA, 13:GCTC, 14:GATA, 15:GTCA, 16 :CAGT, 17:CTGA, 18:CAGA, 19:CTGT, 20:CGTA}             REGION_1 = {1:9855_CON_day_0, 2:9855_CON_day_3, 3:9856_CON_day_0, 4:9856_CON_day_3, 5:9865_LCM-CON_day_0, 6:9865_LCM-CON_day_3, 7:9866_LCM-CON_da y_0, 8:9866_LCM-CON_day_3, 9:LCM-CON_3_day_24, 10:LCM-CON_4_day_24, 11:LCM-CON_5_day_24, 12:LCM-CON_6_day_24}             REGION_2 = {1:CON_1_day_0, 2:CON_1_day_21, 3:CON_1_day_24, 4:LCM-CON_1_day_0, 5:LCM-CON_1_day_21, 6:LCM-CON_1_day_24, 7:LCM-CON_2_day_0, 8:LCM-CO N_2_day_21, 9:LCM-CON_2_day_24, 10:CON_2_day_0, 11:CON_2_day_21, 12:CON_2_day_24        13:LCM-CON_3_day_0, 14:LCM-CON_3_day_21, 15:LCM-CON_4_day_0, 16:LCM-C ON_4_day_21, 17:LCM-CON_5_day_0, 18:LCM-CON_5_day_21, 19:LCM-CON_6_day_0, 20:LCM-CON_6_day_21}                  