extraction_blank_control
oral metagenome
Blank control sample from DNA extraction
ENA-FIRST-PUBLIC
2020-06-01T17:05:29Z
ENA-LAST-UPDATE
2020-05-07T14:07:58Z
External Id
SAMEA6818264
INSDC center name
UPPSALA UNIVERSITY
INSDC first public
2020-06-01T17:05:29Z
INSDC last update
2020-05-07T14:07:58Z
INSDC status
public
Submitter Id
BkE1
adapters
CAAGCAGAAGACGGCATACGAGATCTTGCGGGTGACTGGAGTTCAGACGTGT,AATGATACGGCGACCACCGAGATCTACACCCTAGGTACACTCTTTCCCTACACGACGCTCTT
environment (biome)
laboratory
environment (feature)
reagent
environment (material)
reagent
host common name
metagenome
host taxid
256318
host-associated environmental package
host-associated
investigation type
metagenome
library construction method
Meyer M, Kircher M. 2010. Illumina sequencing library preparation for highly multiplexed target capture and sequencing. Cold Spring Harb Protoc. 2010(6):pdb.prot5448.
library reads sequenced
112523
library size
4850000000
multiplex identifiers
TGGCCAT,GCCAATG
nucleic acid extraction
Dabney J et al. 2013. Complete mitochondrial genome sequence of a Middle Pleistocene cave bear reconstructed from ultrashort DNA fragments. Proc Natl Acad Sci. 110(39):15758�15763.
project name
Wild mammalian dental calculus microbiome
sample name
BkE1
scientific_name
oral metagenome
sequencing method
Illumina HiSeq 2500 paired end