MIGS Cultured Bacterial/Archaeal sample from Enterococcus faecalis TUSoD Ef11
Enterococcus faecalis TUSoD Ef11
Enterococcus faecalis is a gram-positive, facultatively anaerobic, cocci that inhabits the gastrointestinal tract and female genital. The bacterium is an opportunistic pathogen and has become a serious concern in hospitals because of of its antibiotic resistance. The genomic properties of the bacterium, which include up to 25% mobile elements, contain genes for antibiotic resistance. 
material
biological product [ENVO:02000043]
specific host
Homo sapiens
sequencing method
454
nucleic acid extraction
not determined
feature
human-associated habitat [ENVO:00009003]
host taxid
9606
misc_param: HMP supersite
oral
environmental package
missing
isolation-source
missing
project_name
Enterococcus faecalis TUSoD Ef11
source_mat_id
BEI HM-51
sop
http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
investigation type
missing
ref_biomaterial
not determined
collection date
not determined
project_type
Reference Genome
geo_loc_name
not determined
finishing strategy (depth of coverage)
Level 5: Non-contiguous Finished23.6x;79
lat_lon
not determined
isol_growth_condt
not determined
estimated_size
2800000
strain
TUSoD Ef11
num_replicons
not determined
assembly
Newbler v. 1.1.03.24-64-7
misc_param: HMP body site
not determined
biome
terrestrial biome [ENVO:00000446]
BioSampleModel
MIGS.ba