human gut metagenome
collection_date
2016
env_biome
stool
env_feature
stool
env_material
stool
geo_loc_name
USA: Rochester, MN
host
Homo sapiens
lat_lon
N/A
Age
79
Sex
female
BMI
21.55925618
Diagnosis
IBD-N
Disease Duration
6
All Immunosupressants
1
Topical Immunosupressants
0
5-ASA
0
5-ASA Used
0
5-ASA Formulation
0
5-ASA Dose
0
Steroids
1
Topical Steroids
0
Steroid Used
Budesonide,Prednisone
Steroid Dose (mg daily)
11.5
Immunomodulators
0
AZA or 6-MP
0
AZA or 6-MP Used
0
AZA or 6-MP Dose (mg daily)
0
MTX
0
MTX (weekly dose in mg)
0
Biologics
1
TNF-_ Inhibitors
1
TNF-_ Inhibitor Used
ADA
TNF-_ Inhibitor Dose in mg/kg
40
Dose in mg/kg/week
40
Anti-integrin Antibodies
0
Anti-integrin Antibody Type
0
Anti-integrin Antibody Dose (mg)
0
Anti-integrin Antibody Dose (mg/week)
0
Ustekinumab
0
Ustekinumab Dose (mg)
0
Ustekinumab Dose (mg/week)
0
DMARDS
1
Hydroxychloroquine
0
Hydroxychloroquine Dose Daily
0
Leflunomide
0
Leflunomide Dose (mg)
0
Abatacept
0
Abatacept Dose (mg)
0
Abatacept Dose (mg/week)
0
Rituximab
0
Rituximab Dose (mg)
0
Rituximab Dose (mg/week)
0
Tofacitinib
0
Tofacitinib Dose (mg)
0
Other Immunosupressants
0
Other Immunosupressant Type
0
Other Immunosupressant Dose (mg)
0
Other Immunosupressant Frequency
0
Smoking
0
Alcohol
0
Antibiotics
0
Probiotics
1
Probiotic Type
0
IBD Diagnosis
UC
Montreal CD Age
NA
Montreal CD Location
NA
Montreal CD Location Upper GI
NA
Montreal CD Behavior
NA
Montreal CD Behavior Perianal Disease
0
Montreal UC Extent
E2
Montreal UC Severity
S2
Harvey Bradshaw Index
NA
Harvey Bradshaw Index Category
NA
SCCAI
12
SCCAI Category
Active
DAS
NA
DAS Category
NA
CRP
52.7
ESR
missing
RF Positivity
NA
RF Titer
NA
ACPA Positivity
NA
ACPA Titer
NA
Bowel Surgery
1
Colectomy
1
Colectomy Extent (1 = total, 2 = partial)
2
Small Bowel Resection
0
Small Bowel Resections
0
Small Bowel Resection Length (cm)
0
Pouchitis (1 = acute, 2 = chronic)
0
mPDAI
0
mPDAI Category
0
Overall Severity
Moderate
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.human-gut