human gut metagenome
collection_date
2016
env_biome
stool
env_feature
stool
env_material
stool
geo_loc_name
USA: Rochester, MN
host
Homo sapiens
lat_lon
N/A
Age
68
Sex
female
BMI
22.38
Diagnosis
IBD-A
Disease Duration
9
All Immunosupressants
1
Topical Immunosupressants
0
5-ASA
1
5-ASA Used
Mesalamine
5-ASA Formulation
Asacol
5-ASA Dose
4800
Steroids
0
Topical Steroids
0
Steroid Used
0
Steroid Dose (mg daily)
0
Immunomodulators
1
AZA or 6-MP
0
AZA or 6-MP Used
0
AZA or 6-MP Dose (mg daily)
0
MTX
1
MTX (weekly dose in mg)
20
Biologics
0
TNF-_ Inhibitors
0
TNF-_ Inhibitor Used
0
TNF-_ Inhibitor Dose in mg/kg
0
Dose in mg/kg/week
0
Anti-integrin Antibodies
0
Anti-integrin Antibody Type
0
Anti-integrin Antibody Dose (mg)
0
Anti-integrin Antibody Dose (mg/week)
0
Ustekinumab
0
Ustekinumab Dose (mg)
0
Ustekinumab Dose (mg/week)
0
DMARDS
1
Hydroxychloroquine
0
Hydroxychloroquine Dose Daily
0
Leflunomide
0
Leflunomide Dose (mg)
0
Abatacept
0
Abatacept Dose (mg)
0
Abatacept Dose (mg/week)
0
Rituximab
0
Rituximab Dose (mg)
0
Rituximab Dose (mg/week)
0
Tofacitinib
0
Tofacitinib Dose (mg)
0
Other Immunosupressants
0
Other Immunosupressant Type
0
Other Immunosupressant Dose (mg)
0
Other Immunosupressant Frequency
0
Smoking
0
Alcohol
0
Antibiotics
0
Probiotics
0
Probiotic Type
0
IBD Diagnosis
IC
Montreal CD Age
NA
Montreal CD Location
NA
Montreal CD Location Upper GI
NA
Montreal CD Behavior
NA
Montreal CD Behavior Perianal Disease
0
Montreal UC Extent
NA
Montreal UC Severity
NA
Harvey Bradshaw Index
NA
Harvey Bradshaw Index Category
NA
SCCAI
NA
SCCAI Category
NA
DAS
NA
DAS Category
NA
CRP
missing
ESR
missing
RF Positivity
NA
RF Titer
NA
ACPA Positivity
NA
ACPA Titer
NA
Bowel Surgery
0
Colectomy
0
Colectomy Extent (1 = total, 2 = partial)
0
Small Bowel Resection
0
Small Bowel Resections
0
Small Bowel Resection Length (cm)
0
Pouchitis (1 = acute, 2 = chronic)
0
mPDAI
0
mPDAI Category
0
Overall Severity
missing
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.human-gut