human gut metagenome
collection_date
2016
env_biome
stool
env_feature
stool
env_material
stool
geo_loc_name
USA: Rochester, MN
host
Homo sapiens
lat_lon
N/A
Age
76
Sex
male
BMI
33.8123415
Diagnosis
IBD-A
Disease Duration
25
All Immunosupressants
1
Topical Immunosupressants
0
5-ASA
0
5-ASA Used
0
5-ASA Formulation
0
5-ASA Dose
0
Steroids
0
Topical Steroids
0
Steroid Used
0
Steroid Dose (mg daily)
0
Immunomodulators
0
AZA or 6-MP
0
AZA or 6-MP Used
0
AZA or 6-MP Dose (mg daily)
0
MTX
0
MTX (weekly dose in mg)
0
Biologics
1
TNF-_ Inhibitors
1
TNF-_ Inhibitor Used
ADA
TNF-_ Inhibitor Dose in mg/kg
40
Dose in mg/kg/week
20
Anti-integrin Antibodies
0
Anti-integrin Antibody Type
0
Anti-integrin Antibody Dose (mg)
0
Anti-integrin Antibody Dose (mg/week)
0
Ustekinumab
0
Ustekinumab Dose (mg)
0
Ustekinumab Dose (mg/week)
0
DMARDS
1
Hydroxychloroquine
0
Hydroxychloroquine Dose Daily
0
Leflunomide
0
Leflunomide Dose (mg)
0
Abatacept
0
Abatacept Dose (mg)
0
Abatacept Dose (mg/week)
0
Rituximab
0
Rituximab Dose (mg)
0
Rituximab Dose (mg/week)
0
Tofacitinib
0
Tofacitinib Dose (mg)
0
Other Immunosupressants
0
Other Immunosupressant Type
0
Other Immunosupressant Dose (mg)
0
Other Immunosupressant Frequency
0
Smoking
0
Alcohol
0
Antibiotics
0
Probiotics
0
Probiotic Type
0
IBD Diagnosis
CD
Montreal CD Age
A2
Montreal CD Location
L3
Montreal CD Location Upper GI
0
Montreal CD Behavior
B2
Montreal CD Behavior Perianal Disease
0
Montreal UC Extent
NA
Montreal UC Severity
NA
Harvey Bradshaw Index
missing
Harvey Bradshaw Index Category
missing
SCCAI
NA
SCCAI Category
NA
DAS
NA
DAS Category
NA
CRP
missing
ESR
missing
RF Positivity
NA
RF Titer
NA
ACPA Positivity
NA
ACPA Titer
NA
Bowel Surgery
1
Colectomy
1
Colectomy Extent (1 = total, 2 = partial)
2
Small Bowel Resection
1
Small Bowel Resections
2
Small Bowel Resection Length (cm)
93
Pouchitis (1 = acute, 2 = chronic)
0
mPDAI
0
mPDAI Category
0
Overall Severity
missing
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.human-gut