MIGS Cultured Bacterial/Archaeal sample from Clostridium difficile NAP08
Clostridioides difficile NAP08
Clostridium difficile NAP08
finishing strategy (depth of coverage)
Level 2: High-Quality Draft94.44x;111
collection date
not determined
estimated_size
4022000
sop
http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
specific host
Homo sapiens
project_type
Reference Genome
lat_lon
not determined
environment (biome)
terrestrial biome [ENVO:00000446]
source_mat_id
BEI HM-89
misc_param: HMP body site
not determined
nucleic acid extraction
not determined
investigation_type
bacteria_archaea
host taxid
9606
environment (feature)
human-associated habitat [ENVO:00009003]
project_name
Clostridium difficile NAP08
assembly
Newbler v. 2.3-10192009
geo_loc_name
not determined
ref_biomaterial
not determined
misc_param: HMP supersite
gastrointestinal_tract
environment (material)
biological product [ENVO:02000043]
isol_growth_condt
not determined
env_package
missing
strain
NAP08
num_replicons
not determined
sequencing method
454
isolation-source
missing
BioSampleModel
MIGS.ba