mouse gut metagenome
tissue collected 8.5 days post infection with LCMV Cl13 plus antiCD8 or isotype treatment
ENA-FIRST-PUBLIC
2020-08-04T17:07:37Z
ENA-LAST-UPDATE
2020-08-04T13:08:11Z
External Id
SAMEA7118374
INSDC center name
UCSDMI
INSDC first public
2020-08-04T17:07:37Z
INSDC last update
2020-08-04T13:08:11Z
INSDC status
public
Submitter Id
qiita_sid_11043:11043.15.stool.S2319.L008
age at death
12
age_at_death_units
weeks
age_atdeath_weeks
12
analysis_number_qiita1
stoolACD8cd8
analysis_number_qiita_stool
aCD8
anonymized name
stool.9d.antiCD8.acd815
antibody_treatment
53-6.7
cage id
cage3
collection method
fresh material
collection time
not collected
collection_date_orig
12/12/17
collection_device
not collected
collection_time_hour
not collected
collection_timestamp
2017-12-12
dna_extracted
TRUE
elevation
193
elevation_units
meters
empo_1
Host-associated
empo_2
Animal
empo_3
Animal corpus
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
feces
expt_repeat
only
gender
female
geo loc name
USA:CA,San Diego
host age
12
host body habitat
UBERON:feces
host body product
UBERON:feces
host body site
UBERON:feces
host common name
mouse
host life stage
adult
host scientific name
Mus musculus
host subject id
antiCD8acd815
host taxid
10090
host weight
not provided
host_age_units
weeks
host_subject_id_old
stool.9d.antiCD8.acd815
host_weight_units
g
iacuc_institute
UCSD
iacuc_protocol_id
S07315
infected
TRUE
infection
tissue collected 8.5 days post infection with LCMV Cl13 plus antiCD8 or isotype treatment
latitude
32.842
latitude_units
Decimal degrees
lcmv_type
chronic
letter
trns
life stage
adult
longitude
-117.258
longitude_units
Decimal degrees
mouse strain
c57bl6j
mouse_tag
antiCD8acd815
ms_16s
metagen_sequencing
physical_specimen_location
Zuniga lab, UCSD
physical_specimen_remaining
FALSE
pi
Zuniga
request_number
not provided
sample name
qiita_sid_11043:11043.15.stool.S2319.L008
sample type
feces
sample_name_old
antiCD8acd815
scientific_name
mouse gut metagenome
sex
female
strain_background
C57BL/6
strain_background_common
B6
strain_genotype
not provided
strain_vendor
Jackson
time point
9
time_point_units
days post infection
tissue_mg
not provided
tube_id
not provided
v_type
Cl13_53-6.7