marine metagenome
This sample (TARA_N000001692) was collected during the Tara Oceans expedition (2009-2013) at station TARA_106 (latitudeN=0.0307, longitudeE=-84.612) on date/time=2011-05-03T20:52, using a PUMP (High Volume Peristaltic Pump) with ECOTriplet. The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 38-42 m, targeting a deep chlorophyll maximum layer (ENVO:xxxxxxxx) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-5 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics analysis. This sample has replicate sample(s): TARA_N000001693.
Chlorophyll Sensor
0.489496
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2011-05-03T23:37
External Id
SAMEA2622278
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:09Z
INSDC last update
2015-11-04T11:49:19Z
INSDC status
public
Latitude End
0.09
Longitude End
-84.6467
Salinity Sensor
34.85135
Submitter Id
TARA_N000001692
depth
40
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
deep chlorophyll maximum layer (ENVO:xxxxxxxx)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2011-05-03T20:52
event label
TARA_20110503T2052Z_106_EVENT_PUMP
further details
tbd
last update date
2014-05-01Z
latitude start
0.0307
longitude start
-84.612
marine region
(search radius=5 degrees) Marine Ecoregion:Eastern Galapagos Islands (MRGID:21870), Marine Ecoregion:Guayaquil (MRGID:21974)
nitrate sensor
9.684618
oxygen sensor
148.901154
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-DNA(100L)_W0.8-5
sample collection device
PUMP (High Volume Peristaltic Pump) with ECOTriplet
sample name
TARA_N000001692
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20110501Z
sampling platform
SV Tara
sampling station
TARA_106
size fraction lower threshold
0.8
size fraction upper threshold
5
temperature
22.167492