marine sediment metagenome
Meta-omics study of the global deep-sea benthic diversity with focus on the Clarion-Clipperton Fracture Zone
ENA first public
2020-07-03
ENA-LAST-UPDATE
2022-01-13
External Id
SAMEA5755490
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2020-07-03T04:03:13Z
INSDC last update
2022-01-13T13:25:22Z
INSDC status
suppressed
Submitter Id
qiita_sid_12249:12249.V1V2.DNA.349.A
alt_elev
0
area
South Atlantic
basin
Atlantic Ocean
c_perc
0.56
cn
6.69
collection_timestamp
2009-07-12
core
M79_1/1/519
deployment
M79_1/1/519
depth
4605.1
distance_to_coast
456.097
dna_extracted
True
elevation
missing: not collected
empo_1
free-living
empo_2
saline
empo_3
sediment (saline)
env biome
marine abyssal zone biome
env feature
marine oligotrophic desert
env package
sediment
env_material
mud
expedition
DIVA3
experimental_factor
gene|marine metagenome|uncultured microorganism|uncultured organism|ecotype|biological replicate|technical replicate|interspecies interaction between organisms
extract_concentration
25.5
geo loc name
Atlantic Ocean:South Atlantic,DIVA3
host subject id
DSMP_349
impact
0
investigation type
MIMARKS-survey
lat lon
35.9873333 S 49.017 W
latitude
-35.987333299999996
longitude
-49.016999999999996
marker
V1V2
molecule
DNA
mud
69.67
n_perc
0.08
ng_per_pooled_samp
50.0
nodule_density
0.0
nodule_size
0.0
npp_month
435.0601348999999
npp_year
621.5741882
physical_specimen_location
Pawlowski Lab
physical_specimen_remaining
TRUE
poc_flux_month
0.004793562
poc_flux_year
0.00447001
project name
DSMP
province
Argentinean Basin
pseudoreplicate
M79_1/1/519
rel_to_oxygen
aerobe
replicate
A
samp mat process
Freezer -20C
samp_collect_device
multiple corer
samp_size
c.a. 10 ml
sample name
qiita_sid_12249:12249.V1V2.DNA.349.A
sample type
marine sediment
sand
30.3
sediment_sample
349
station
M79_1/1/519
submitted to INSDC
No