marine metagenome
This sample (TARA_N000000292) was collected during the Tara Oceans expedition (2009-2013) at station TARA_043 (latitudeN=4.6599, longitudeE=73.4856) on date/time=2010-04-05T10:02, using a PUMP (High Volume Peristaltic Pump). The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 3-7 m, targeting a surface water layer (ENVO:00002042) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-5 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis.
Chlorophyll Sensor
0.207021
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2010-04-05T12:29
External Id
SAMEA2620292
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:08Z
INSDC last update
2015-11-04T11:48:08Z
INSDC status
public
Latitude End
4.6599
Longitude End
73.4858
Salinity Sensor
34.496083
Submitter Id
TARA_N000000292
depth
5
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
surface water layer (ENVO:00002042)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2010-04-05T10:02
event label
TARA_20100405T1002Z_043_EVENT_PUMP
further details
tbd
last update date
2014-05-01Z
latitude start
4.6599
longitude start
73.4856
marine region
(search radius=5 degrees) Marine Province:Central Indian Ocean Islands (MRGID:21774), Marine Ecoregion:Maldives (MRGID:21835)
nitrate sensor
-0.711536
oxygen sensor
190.404333
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-RNA(100L)_W0.8-5
sample collection device
PUMP (High Volume Peristaltic Pump)
sample name
TARA_N000000292
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20100327Z
sampling platform
SV Tara
sampling station
TARA_043
size fraction lower threshold
0.8
size fraction upper threshold
5
temperature
29.961808