marine metagenome
This sample (TARA_N000003195) was collected during the Tara Oceans expedition (2009-2013) at station TARA_144 (latitudeN=36.4121, longitudeE=-72.9289) on date/time=2012-01-30T22:16:45, using a ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles. The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 382-400 m, targeting a mesopelagic zone (ENVO:00000213) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-3 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis.
Chlorophyll Sensor
0.001625
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2012-01-31T03:41
External Id
SAMEA2623621
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:08Z
INSDC last update
2015-11-04T11:48:30Z
INSDC status
public
Latitude End
36.3473
Longitude End
-72.7081
Salinity Sensor
36.525539
Submitter Id
TARA_N000003195
depth
390
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
mesopelagic zone (ENVO:00000213)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2012-01-30T22:16:45
event label
TARA_20120130T2219Z_144_Combined-EVENTS_CAST
further details
tbd
last update date
2014-05-01Z
latitude start
36.4121
longitude start
-72.9289
marine region
(search radius=5 degrees) Marine Ecoregion:Virginian (MRGID:21853)
nitrate sensor
4.690983
oxygen sensor
190.548175
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-RNA(100L)_W0.8-3
sample collection device
ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles
sample name
TARA_N000003195
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20120126Z
sampling platform
SV Tara
sampling station
TARA_144
size fraction lower threshold
0.8
size fraction upper threshold
3
temperature
17.949958