marine sediment metagenome
Meta-omics study of the global deep-sea benthic diversity with focus on the Clarion-Clipperton Fracture Zone
ENA first public
2020-07-03
ENA-LAST-UPDATE
2022-01-13
External Id
SAMEA5755074
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2020-07-03T04:03:13Z
INSDC last update
2022-01-13T13:25:21Z
INSDC status
suppressed
Submitter Id
qiita_sid_12249:12249.V1V2.DNA.134.A
alt_elev
0
area
CCFZ
basin
Pacific Ocean
collection_timestamp
2015-03-16
core
OMS1-S11-MC23-C10
deployment
OMS1-S11-MC23
depth
4152.0
distance_to_coast
753.752
dna_extracted
True
elevation
missing: not collected
empo_1
free-living
empo_2
saline
empo_3
sediment (saline)
env biome
marine abyssal zone biome
env feature
marine oligotrophic desert
env package
sediment
env_material
mud
expedition
Abyssline2
experimental_factor
gene|marine metagenome|uncultured microorganism|uncultured organism|ecotype|biological replicate|technical replicate|interspecies interaction between organisms
extract_concentration
18.0
geo loc name
Pacific Ocean:CCFZ,Abyssline2
host subject id
DSMP_134
impact
0
investigation type
MIMARKS-survey
lat lon
12.009193 N 117.3803555 W
latitude
12.009193
longitude
-117.3803555
marker
V1V2
molecule
DNA
ng_per_pooled_samp
75.0
npp_month
346.5496216
npp_year
263.34038799999996
physical_specimen_location
Pawlowski Lab
physical_specimen_remaining
missing: not provided
poc_flux_month
0.005050855
poc_flux_year
0.004968379
project name
DSMP
province
OMS1
pseudoreplicate
OMS1-S11-MC23-C10-R2
rel_to_oxygen
aerobe
replicate
A
samp mat process
lifeguard preservation solution
samp_collect_device
multiple corer
samp_size
2 ml
sample name
qiita_sid_12249:12249.V1V2.DNA.134.A
sample type
marine sediment
sediment_sample
134
station
OMS1-S11
submitted to INSDC
No