marine metagenome
This sample (TARA_N000002131) was collected during the Tara Oceans expedition (2009-2013) at station TARA_148b (latitudeN=34.1504, longitudeE=-56.9684) on date/time=2012-02-27T15:28:31, using a ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles. The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 240-258 m, targeting a mesopelagic zone (ENVO:00000213) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-3 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics analysis.
Chlorophyll Sensor
0.004651
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2012-02-27T21:34
External Id
SAMEA2623763
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:09Z
INSDC last update
2015-11-04T11:48:53Z
INSDC status
public
Latitude End
33.9044
Longitude End
-56.7834
Salinity Sensor
36.563668
Submitter Id
TARA_N000002131
depth
250
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
mesopelagic zone (ENVO:00000213)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2012-02-27T15:28:31
event label
TARA_20120227T1532Z_148b_Combined-EVENTS_CAST
further details
tbd
last update date
2014-05-01Z
latitude start
34.1504
longitude start
-56.9684
marine region
(search radius=5 degree) Marine Ecoregion:Bermuda (MRGID:21979)
nitrate sensor
4.042901
oxygen sensor
191.752575
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-DNA(100L)_W0.8-3
sample collection device
ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles
sample name
TARA_N000002131
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20120223Z
sampling platform
SV Tara
sampling station
TARA_148b
size fraction lower threshold
0.8
size fraction upper threshold
3
temperature
18.169021