marine metagenome
This sample (TARA_N000001374) was collected during the Tara Oceans expedition (2009-2013) at station TARA_083 (latitudeN=-54.3739, longitudeE=-65.1342) on date/time=2010-12-16T11:58, using a PUMP (High Volume Peristaltic Pump). The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 3-7 m, targeting a surface water layer (ENVO:00002042) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-5 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis. This sample has replicate sample(s): TARA_N000001375.
Chlorophyll Sensor
0.248632
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2010-12-16T13:07
External Id
SAMEA2621470
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:09Z
INSDC last update
2015-11-04T11:49:20Z
INSDC status
public
Latitude End
-54.3793
Longitude End
-65.0211
Salinity Sensor
32.945667
Submitter Id
TARA_N000001374
depth
5
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
surface water layer (ENVO:00002042)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2010-12-16T11:58
event label
TARA_20101216T1158Z_083_EVENT_PUMP
further details
tbd
last update date
2014-05-01Z
latitude start
-54.3739
longitude start
-65.1342
marine region
(search radius=5 degrees) Marine Province:Magellanic (MRGID:21756), Marine Ecoregion:Patagonian Shelf (MRGID:8586)
nitrate sensor
11.003731
oxygen sensor
293.312667
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-RNA(100L)_W0.8-5
sample collection device
PUMP (High Volume Peristaltic Pump)
sample name
TARA_N000001374
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20101126Z
sampling platform
SV Tara
sampling station
TARA_083
size fraction lower threshold
0.8
size fraction upper threshold
5
temperature
7.3549