marine metagenome
This sample (TARA_N000001846) was collected during the Tara Oceans expedition (2009-2013) at station TARA_112 (latitudeN=-23.2232, longitudeE=-129.5986) on date/time=2011-06-15T18:43:16, using a ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles. The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 691-700 m, targeting a mesopelagic zone (ENVO:00000213) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-3 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis.
Chlorophyll Sensor
0
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2011-06-16T02:45
External Id
SAMEA2622584
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:09Z
INSDC last update
2015-11-04T11:48:49Z
INSDC status
public
Latitude End
-23.1719
Longitude End
-129.6713
Salinity Sensor
34.305001
Submitter Id
TARA_N000001846
depth
696
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
mesopelagic zone (ENVO:00000213)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2011-06-15T18:43:16
event label
TARA_20110615T1845Z_112_Combined-EVENTS_CAST
further details
tbd
last update date
2014-05-01Z
latitude start
-23.2232
longitude start
-129.5986
marine region
(search radius=5 degrees) Marine Ecoregion:Rapa-Pitcairn (MRGID:21942)
nitrate sensor
29.181849
oxygen sensor
199.248437
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-RNA(100L)_W0.8-3
sample collection device
ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles
sample name
TARA_N000001846
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20110520Z
sampling platform
SV Tara
sampling station
TARA_112
size fraction lower threshold
0.8
size fraction upper threshold
3
temperature
5.791448