marine metagenome
This sample (TARA_N000002179) was collected during the Tara Oceans expedition (2009-2013) at station TARA_135 (latitudeN=32.9986, longitudeE=-121.7698) on date/time=2011-10-23T14:24, using a PUMP (High Volume Peristaltic Pump). The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 3-7 m, targeting a surface water layer (ENVO:00002042) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-5 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics analysis. This sample has replicate sample(s): TARA_N000002180.
Chlorophyll Sensor
0.371408
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2011-10-23T18:22
External Id
SAMEA2623206
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:09Z
INSDC last update
2015-11-04T11:49:33Z
INSDC status
public
Latitude End
33.0234
Longitude End
-121.736
Salinity Sensor
33.49059
Submitter Id
TARA_N000002179
depth
5
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
surface water layer (ENVO:00002042)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2011-10-23T14:24
event label
TARA_20111023T1424Z_135_EVENT_PUMP
further details
tbd
last update date
2014-05-01Z
latitude start
32.9986
longitude start
-121.7698
marine region
(search radius=5 degrees) Marine Ecoregion:Northern California (MRGID:21844), Marine Ecoregion:Southern California Bight (MRGID:22001)
nitrate sensor
-0.971353
oxygen sensor
226.3952
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-DNA(100L)_W0.8-5
sample collection device
PUMP (High Volume Peristaltic Pump)
sample name
TARA_N000002179
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20110928Z
sampling platform
SV Tara
sampling station
TARA_135
size fraction lower threshold
0.8
size fraction upper threshold
5
temperature
17.428