marine metagenome
This sample (TARA_N000001434) was collected during the Tara Oceans expedition (2009-2013) at station TARA_081 (latitudeN=-44.5913, longitudeE=-52.1804) on date/time=2010-12-02T18:52, using a PUMP (High Volume Peristaltic Pump) with ECOTriplet. The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 33-37 m, targeting a deep chlorophyll maximum layer (ENVO:xxxxxxxx) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-5 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis. This sample has replicate sample(s): TARA_N000001435.
Chlorophyll Sensor
0.501699
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2010-12-02T21:26
External Id
SAMEA2621388
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:09Z
INSDC last update
2015-11-04T11:49:39Z
INSDC status
public
Latitude End
-44.6399
Longitude End
-52.1384
Salinity Sensor
34.761085
Submitter Id
TARA_N000001434
depth
35
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
deep chlorophyll maximum layer (ENVO:xxxxxxxx)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2010-12-02T18:52
event label
TARA_20101202T1852Z_081_EVENT_PUMP
further details
tbd
last update date
2014-05-01Z
latitude start
-44.5913
longitude start
-52.1804
nitrate sensor
3.68799
oxygen sensor
254.912385
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-RNA(100L)_W0.8-5
sample collection device
PUMP (High Volume Peristaltic Pump) with ECOTriplet
sample name
TARA_N000001434
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20101126Z
sampling platform
SV Tara
sampling station
TARA_081
size fraction lower threshold
0.8
size fraction upper threshold
5
temperature
13.244131