Oikopleura dioica
Long-range Hi-C data generated from 50 fully matured O. dioica males following manufacturer's protocol (Dovetail, 21004). The males were collected from the on-doing laboratory culture deriving from the wild population in Ishikawa Harbor, Okinawa. The Hi-C library was sequenced on a MiSeq (Illumina, SY-410-1003) platform using a 300 cycles V2 sequencing kit (Illumina, MS-102-2002). The data was used to scaffold the I69-5 genome assembly and generated Hi-C contact matrices.
ENA-FIRST-PUBLIC
2020-09-08T04:07:23Z
ENA-LAST-UPDATE
2020-09-02T08:16:02Z
External Id
SAMEA7282647
INSDC center name
OKINAWA INSTITUTE OF SCIENCE AND TECHNOLOGY
INSDC first public
2020-09-08T04:07:23Z
INSDC last update
2020-09-02T08:16:02Z
INSDC status
public
Submitter Id
2
collected by
Yongkai Tan, Okinawa Institute of Science and Technology Graduate University, Genomics and Regulatory Systems Unit
dev stage
fully matured adults
isolation source
on-going laboratory culture maintained at OIST
sample name
2
scientific_name
Oikopleura dioica
sex
males