marine metagenome
This sample (TARA_N000002936) was collected during the Tara Oceans expedition (2009-2013) at station TARA_137 (latitudeN=14.2075, longitudeE=-116.6468) on date/time=2011-12-02T20:42, using a PUMP (High Volume Peristaltic Pump) with ECOTriplet. The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 38-42 m, targeting a deep chlorophyll maximum layer (ENVO:xxxxxxxx) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-5 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics analysis. This sample has replicate sample(s): TARA_N000002935.
Chlorophyll Sensor
99999
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2011-12-02T22:01
External Id
SAMEA2623304
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:09Z
INSDC last update
2015-11-04T11:49:36Z
INSDC status
public
Latitude End
14.2016
Longitude End
-116.696
Salinity Sensor
99999
Submitter Id
TARA_N000002936
depth
40
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
deep chlorophyll maximum layer (ENVO:xxxxxxxx)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2011-12-02T20:42
event label
TARA_20111202T2042Z_137_EVENT_PUMP
further details
tbd
last update date
2014-05-01Z
latitude start
14.2075
longitude start
-116.6468
marine region
(search radius=5 degrees) Marine Ecoregion:Revillagigedos (MRGID:21973)
nitrate sensor
99999
oxygen sensor
99999
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-DNA(100L)_W0.8-5
sample collection device
PUMP (High Volume Peristaltic Pump) with ECOTriplet
sample name
TARA_N000002936
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20111124Z
sampling platform
SV Tara
sampling station
TARA_137
size fraction lower threshold
0.8
size fraction upper threshold
5
temperature
99999