marine sediment metagenome
Meta-omics study of the global deep-sea benthic diversity with focus on the Clarion-Clipperton Fracture Zone
ENA first public
2020-07-03
ENA-LAST-UPDATE
2022-01-13
External Id
SAMEA5755013
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2020-07-03T04:03:13Z
INSDC last update
2022-01-13T13:25:21Z
INSDC status
suppressed
Submitter Id
qiita_sid_12249:12249.V1V2.DNA.102.B
alt_elev
0
area
CCFZ
basin
Pacific Ocean
collection_timestamp
2015-03-09
core
UK1-U13-MC18-C1
deployment
UK1-U13-MC18
depth
4256.0
distance_to_coast
664.179
dna_extracted
True
elevation
missing: not collected
empo_1
free-living
empo_2
saline
empo_3
sediment (saline)
env biome
marine abyssal zone biome
env feature
marine oligotrophic desert
env package
sediment
env_material
mud
expedition
Abyssline2
experimental_factor
gene|marine metagenome|uncultured microorganism|uncultured organism|ecotype|biological replicate|technical replicate|interspecies interaction between organisms
extract_concentration
18.7
geo loc name
Pacific Ocean:CCFZ,Abyssline2
host subject id
DSMP_102
impact
0
investigation type
MIMARKS-survey
lat lon
12.5968157 N 116.4936017 W
latitude
12.596815699999999
longitude
-116.4936017
marker
V1V2
molecule
DNA
ng_per_pooled_samp
75.0
npp_month
341.7917175
npp_year
266.90393450000005
physical_specimen_location
Pawlowski Lab
physical_specimen_remaining
missing: not provided
poc_flux_month
0.005119682
poc_flux_year
0.004930283
project name
DSMP
province
UK1
pseudoreplicate
UK1-U13-MC18-C1-R3
rel_to_oxygen
aerobe
replicate
B
samp mat process
lifeguard preservation solution
samp_collect_device
multiple corer
samp_size
2 ml
sample name
qiita_sid_12249:12249.V1V2.DNA.102.B
sample type
marine sediment
sediment_sample
102
station
UK1-U13
submitted to INSDC
No