marine metagenome
This sample (TARA_N000001485) was collected during the Tara Oceans expedition (2009-2013) at station TARA_080 (latitudeN=-40.6241, longitudeE=-51.9229) on date/time=2010-11-29T19:37:13, using a ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles. The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 85-85 m, targeting a deep chlorophyll maximum layer (ENVO:xxxxxxxx) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-5 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis. This sample has replicate sample(s): TARA_N000001484.
Chlorophyll Sensor
0.299324
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2010-11-29T22:04
External Id
SAMEA2621337
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:09Z
INSDC last update
2015-11-04T11:49:34Z
INSDC status
public
Latitude End
-40.6846
Longitude End
-51.8511
Salinity Sensor
35.958367
Submitter Id
TARA_N000001485
depth
85
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
deep chlorophyll maximum layer (ENVO:xxxxxxxx)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2010-11-29T19:37:13
event label
TARA_20101129T1938Z_080_Combined-EVENTS_CAST
further details
tbd
last update date
2014-05-01Z
latitude start
-40.6241
longitude start
-51.9229
nitrate sensor
1.350935
oxygen sensor
210.6255
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-RNA(100L)_W0.8-5
sample collection device
ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles
sample name
TARA_N000001485
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20101126Z
sampling platform
SV Tara
sampling station
TARA_080
size fraction lower threshold
0.8
size fraction upper threshold
5
temperature
18.25395