marine metagenome
This sample (TARA_N000001071) was collected during the Tara Oceans expedition (2009-2013) at station TARA_086 (latitudeN=-64.3183, longitudeE=-53.1081) on date/time=2011-01-09T19:25, using a PUMP (High Volume Peristaltic Pump) with ECOTriplet. The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 33-37 m, targeting a deep chlorophyll maximum layer (ENVO:xxxxxxxx) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-5 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis. This sample has replicate sample(s): TARA_N000001070.
Chlorophyll Sensor
2.027744
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2011-01-09T21:20
External Id
SAMEA2621609
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:09Z
INSDC last update
2015-11-04T11:49:44Z
INSDC status
public
Latitude End
-64.2354
Longitude End
-53.0393
Salinity Sensor
34.159479
Submitter Id
TARA_N000001071
depth
35
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
deep chlorophyll maximum layer (ENVO:xxxxxxxx)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2011-01-09T19:25
event label
TARA_20110109T1925Z_086_EVENT_PUMP
further details
tbd
last update date
2014-05-01Z
latitude start
-64.3183
longitude start
-53.1081
marine region
(search radius=5 degrees) Marine Province:Scotia Sea (MRGID:21742), Marine Ecoregion:South Shetland Islands (MRGID:21925)
nitrate sensor
28.966365
oxygen sensor
321.804765
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-RNA(100L)_W0.8-5
sample collection device
PUMP (High Volume Peristaltic Pump) with ECOTriplet
sample name
TARA_N000001071
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20101231Z
sampling platform
SV Tara
sampling station
TARA_086
size fraction lower threshold
0.8
size fraction upper threshold
5
temperature
-1.6529