marine metagenome
This sample (TARA_N000002925) was collected during the Tara Oceans expedition (2009-2013) at station TARA_137 (latitudeN=14.2035, longitudeE=-116.6261) on date/time=2011-12-02T14:12, using a PUMP (High Volume Peristaltic Pump). The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 3-7 m, targeting a surface water layer (ENVO:00002042) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-5 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics analysis. This sample has replicate sample(s): TARA_N000002926.
Chlorophyll Sensor
0.290611
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2011-12-02T14:46
External Id
SAMEA2623284
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:09Z
INSDC last update
2015-11-04T11:49:26Z
INSDC status
public
Latitude End
14.2017
Longitude End
-116.6336
Salinity Sensor
33.884425
Submitter Id
TARA_N000002925
depth
5
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
surface water layer (ENVO:00002042)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2011-12-02T14:12
event label
TARA_20111202T1412Z_137_EVENT_PUMP
further details
tbd
last update date
2014-05-01Z
latitude start
14.2035
longitude start
-116.6261
marine region
(search radius=5 degrees) Marine Ecoregion:Revillagigedos (MRGID:21973)
nitrate sensor
3.241307
oxygen sensor
195.126917
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-DNA(100L)_W0.8-5
sample collection device
PUMP (High Volume Peristaltic Pump)
sample name
TARA_N000002925
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20111124Z
sampling platform
SV Tara
sampling station
TARA_137
size fraction lower threshold
0.8
size fraction upper threshold
5
temperature
26.4091