Lachnoclostridium sp. An138
This sample represents a metagenome assembled genome from the metagenomic sample ERS3558286
ENA-FIRST-PUBLIC
2020-09-08T17:06:11Z
ENA-LAST-UPDATE
2020-08-21T13:42:38Z
External Id
SAMEA7202148
INSDC center name
THE ROSLIN INSTITUTE
INSDC first public
2020-09-08T17:06:11Z
INSDC last update
2020-08-21T13:42:38Z
INSDC status
public
Submitter Id
Chicken_11_mag_211
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
Metabat2
binning parameters
-v -m 2000
binning software
Metabat2
collection date
not collected
common name
Lachnoclostridium sp. An138
completeness score
99.37
completeness software
CheckM
contamination score
0.16
environment (biome)
Gallus gallus domesticus
environment (feature)
Caeca
environment (material)
Gut contents
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
55.86513
geographic location (longitude)
-3.197356
investigation type
metagenome
isolation source
metagenome
metagenomic source
Gallus gallus
project name
PRJEB33338
sample derived from
ERS3558286
sample name
Chicken_11_mag_211
scientific_name
Lachnoclostridium sp. An138
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
CheckM_markers