marine metagenome
This sample (TARA_X000000488) was collected during the Tara Oceans expedition (2009-2013) at station TARA_005 (latitudeN=36.0088, longitudeE=-4.5184) on date/time=2009-09-20T10:45, using a PUMP (High Volume Peristaltic Pump). The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 3-7 m, targeting a surface water layer (ENVO:00002042) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-5 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis. This sample has replicate sample(s): TARA_X000000487.
Chlorophyll Sensor
-0.0242
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2009-09-20T15:30
External Id
SAMEA2619443
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:08Z
INSDC last update
2015-11-04T11:48:19Z
INSDC status
public
Latitude End
36.0169
Longitude End
-4.5049
Salinity Sensor
36.7983
Submitter Id
TARA_X000000488
depth
5
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
surface water layer (ENVO:00002042)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2009-09-20T10:45
event label
TARA_20090920T1045Z_005_EVENT_PUMP
further details
tbd
last update date
2014-05-01Z
latitude start
36.0088
longitude start
-4.5184
marine region
(search radius=5 degrees) Marine Ecoregion:Alboran Sea (MRGID:3324)
nitrate sensor
99999
oxygen sensor
99999
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-RNA(100L)_W0.8-5
sample collection device
PUMP (High Volume Peristaltic Pump)
sample name
TARA_X000000488
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20090919Z
sampling platform
SV Tara
sampling station
TARA_005
size fraction lower threshold
0.8
size fraction upper threshold
5
temperature
23.03295