marine metagenome
This sample (TARA_N000001217) was collected during the Tara Oceans expedition (2009-2013) at station TARA_089 (latitudeN=-57.7338, longitudeE=-67.1084) on date/time=2011-01-27T08:27, using a PUMP (High Volume Peristaltic Pump). The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 3-7 m, targeting a surface water layer (ENVO:00002042) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-5 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis. This sample has replicate sample(s): TARA_N000001216.
Chlorophyll Sensor
2.161994
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2011-01-27T11:06
External Id
SAMEA2621696
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:09Z
INSDC last update
2015-11-04T11:49:16Z
INSDC status
public
Latitude End
-57.7908
Longitude End
-66.9243
Salinity Sensor
34.044933
Submitter Id
TARA_N000001217
depth
5
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
surface water layer (ENVO:00002042)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2011-01-27T08:27
event label
TARA_20110127T0827Z_089_EVENT_PUMP
further details
tbd
last update date
2014-05-01Z
latitude start
-57.7338
longitude start
-67.1084
marine region
(search radius=5 degrees) Marine Ecoregion:Channels and Fjords of Southern Chile (MRGID:21888)
nitrate sensor
99999
oxygen sensor
289.669417
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-RNA(100L)_W0.8-5
sample collection device
PUMP (High Volume Peristaltic Pump)
sample name
TARA_N000001217
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20101231Z
sampling platform
SV Tara
sampling station
TARA_089
size fraction lower threshold
0.8
size fraction upper threshold
5
temperature
5.826408