marine metagenome
This sample (TARA_N000003144) was collected during the Tara Oceans expedition (2009-2013) at station TARA_143 (latitudeN=29.851, longitudeE=-79.7064) on date/time=2012-01-16T21:35, using a PUMP (High Volume Peristaltic Pump) with ECOTriplet. The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 38-42 m, targeting a deep chlorophyll maximum layer (ENVO:xxxxxxxx) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-5 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis. This sample has replicate sample(s): TARA_N000003143.
Chlorophyll Sensor
0.140461
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2012-01-16T22:47
External Id
SAMEA2623564
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:08Z
INSDC last update
2015-11-04T11:48:17Z
INSDC status
public
Latitude End
29.8982
Longitude End
-79.732
Salinity Sensor
36.213254
Submitter Id
TARA_N000003144
depth
40
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
deep chlorophyll maximum layer (ENVO:xxxxxxxx)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2012-01-16T21:35
event label
TARA_20120116T2135Z_143_EVENT_PUMP
further details
tbd
last update date
2014-05-01Z
latitude start
29.851
longitude start
-79.7064
marine region
(search radius=5 degrees) Marine Ecoregion:Floridian (MRGID:21977), Marine Ecoregion:Carolinian (MRGID:22003)
nitrate sensor
0.90708
oxygen sensor
194.985964
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-RNA(100L)_W0.8-5
sample collection device
PUMP (High Volume Peristaltic Pump) with ECOTriplet
sample name
TARA_N000003144
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20111230Z
sampling platform
SV Tara
sampling station
TARA_143
size fraction lower threshold
0.8
size fraction upper threshold
5
temperature
24.792543