marine metagenome
This sample (TARA_N000001642) was collected during the Tara Oceans expedition (2009-2013) at station TARA_100 (latitudeN=-12.9794, longitudeE=-96.0232) on date/time=2011-04-16T13:03:08, using a ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles. The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 174-180 m, targeting a mesopelagic zone (ENVO:00000213) & marine oxygen minimum zone (ENVO:01000065) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-3 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics analysis.
Chlorophyll Sensor
0.121464
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2011-04-16T19:52
External Id
SAMEA2622158
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:09Z
INSDC last update
2015-11-04T11:49:19Z
INSDC status
public
Latitude End
-12.9057
Longitude End
-96.155
Salinity Sensor
34.840218
Submitter Id
TARA_N000001642
depth
177
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
mesopelagic zone (ENVO:00000213) & marine oxygen minimum zone (ENVO:01000065)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2011-04-16T13:03:08
event label
TARA_20110416T1306Z_100_Combined-EVENTS_CAST
further details
tbd
last update date
2014-05-01Z
latitude start
-12.9794
longitude start
-96.0232
nitrate sensor
21.068385
oxygen sensor
0.70843
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-DNA(100L)_W0.8-3
sample collection device
ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles
sample name
TARA_N000001642
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20110401Z
sampling platform
SV Tara
sampling station
TARA_100
size fraction lower threshold
0.8
size fraction upper threshold
3
temperature
13.014573