marine metagenome
This sample (TARA_N000000214) was collected during the Tara Oceans expedition (2009-2013) at station TARA_051 (latitudeN=-21.5043, longitudeE=54.3563) on date/time=2010-05-11T03:42, using a PUMP (High Volume Peristaltic Pump). The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 3-7 m, targeting a surface water layer (ENVO:00002042) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-5 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis. This sample has replicate sample(s): TARA_N000000215.
Chlorophyll Sensor
0.040347
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2010-05-11T06:40
External Id
SAMEA2620503
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:09Z
INSDC last update
2015-11-04T11:48:30Z
INSDC status
public
Latitude End
-21.4603
Longitude End
54.3052
Salinity Sensor
34.9008
Submitter Id
TARA_N000000214
depth
5
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
surface water layer (ENVO:00002042)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2010-05-11T03:42
event label
TARA_20100511T0342Z_051_EVENT_PUMP
further details
tbd
last update date
2014-05-01Z
latitude start
-21.5043
longitude start
54.3563
nitrate sensor
0.244232
oxygen sensor
194.6898
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-RNA(100L)_W0.8-5
sample collection device
PUMP (High Volume Peristaltic Pump)
sample name
TARA_N000000214
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20100508Z
sampling platform
SV Tara
sampling station
TARA_051
size fraction lower threshold
0.8
size fraction upper threshold
5
temperature
27.25908