human metagenome
strain
not applicable
isolate
not applicable
host
Homo sapiens
isolation_source
Genital tract
collection_date
missing
geo_loc_name
South Africa: Cape Town
sample_type
Cervical swab
genotype
bacteria
altitude
not applicable
lat_lon
not applicable
barcode_sequence
GCTACGCTCTCTCTAT
linker_primer_sequence
CCTACGGGNGGCWGCAG
reverse_primer
GACTACHVGGGTATCTAATCC
age
39
trichomonas
negative
candida
negative
gardnerella
positive
bacteria
negative
bv
positive
pap
normal
hpv
positive
hpv_type
58
hpv_mult
mono
hrhpv
hrHPV
hpv_oncogen
hrHPV
hpv_6
positive
hpv_type_6
58;82
hpv_mult_6
multiple
hrhpv_6
hrHPV
hpv_oncogen_6
hrHPV
hpv_12
positive
hpv_type_12
39;53;59;82
hpv_mult_12
multiple
hrhpv_12
hrHPV
hpv_oncogen_12
hrHPV
hpv_18
positive
hpv_type_18
16;39
hpv_mult_18
multiple
hrhpv_18
hrHPV
hpv_oncogen_18
hrHPV
hpv_24
positive
hpv_type_24
16
hpv_mult_24
mono
hrhpv_24
hrHPV
hpv_oncogen_24
hrHPV
BioSampleModel
Metagenome or environmental