marine metagenome
This sample (TARA_N000003219) was collected during the Tara Oceans expedition (2009-2013) at station TARA_145 (latitudeN=39.2305, longitudeE=-70.0377) on date/time=2012-02-02T11:52, using a PUMP (High Volume Peristaltic Pump). The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 3-7 m, targeting a surface water layer (ENVO:00002042) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-5 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis. This sample has replicate sample(s): TARA_N000003220.
Chlorophyll Sensor
0.296307
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2012-02-02T13:52
External Id
SAMEA2623641
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:08Z
INSDC last update
2015-11-04T11:48:12Z
INSDC status
public
Latitude End
39.2173
Longitude End
-72.0327
Salinity Sensor
35.18335
Submitter Id
TARA_N000003219
depth
5
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
surface water layer (ENVO:00002042)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2012-02-02T11:52
event label
TARA_20120202T1152Z_145_EVENT_PUMP
further details
tbd
last update date
2014-05-01Z
latitude start
39.2305
longitude start
-70.0377
marine region
(search radius=5 degrees) Marine Ecoregion:Gulf of Maine/Bay of Fundy (MRGID:21849), Marine Ecoregion:Virginian (MRGID:21853)
nitrate sensor
3.478193
oxygen sensor
233.859
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-RNA(100L)_W0.8-5
sample collection device
PUMP (High Volume Peristaltic Pump)
sample name
TARA_N000003219
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20120126Z
sampling platform
SV Tara
sampling station
TARA_145
size fraction lower threshold
0.8
size fraction upper threshold
5
temperature
14.11885