marine metagenome
This sample (TARA_N000001690) was collected during the Tara Oceans expedition (2009-2013) at station TARA_106 (latitudeN=-0.0283, longitudeE=-84.5862) on date/time=2011-05-03T12:27, using a PUMP (High Volume Peristaltic Pump). The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 3-7 m, targeting a surface water layer (ENVO:00002042) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-5 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics analysis. This sample has replicate sample(s): TARA_N000001691.
Chlorophyll Sensor
0.236603
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2011-05-03T16:05
External Id
SAMEA2622258
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:09Z
INSDC last update
2015-11-04T11:49:23Z
INSDC status
public
Latitude End
0.0422
Longitude End
-84.6168
Salinity Sensor
34.529983
Submitter Id
TARA_N000001690
depth
5
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
surface water layer (ENVO:00002042)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2011-05-03T12:27
event label
TARA_20110503T1227Z_106_EVENT_PUMP
further details
tbd
last update date
2014-05-01Z
latitude start
-0.0283
longitude start
-84.5862
marine region
(search radius=5 degrees) Marine Ecoregion:Eastern Galapagos Islands (MRGID:21870), Marine Ecoregion:Guayaquil (MRGID:21974)
nitrate sensor
5.715193
oxygen sensor
194.110583
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-DNA(100L)_W0.8-5
sample collection device
PUMP (High Volume Peristaltic Pump)
sample name
TARA_N000001690
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20110501Z
sampling platform
SV Tara
sampling station
TARA_106
size fraction lower threshold
0.8
size fraction upper threshold
5
temperature
25.504283