metagenome
As part of the AMIGA project, potato plant rhizosphere samples were collected of a cisgenic version of Desir�e, its non-engineered late blight sensitive counterpart and a conventionally bred late-blight resistant variety Sarpo Mira in the presence and absence of fungicides. Two experimental field sites in Ireland and the Netherlands were selected and sampled for two subsequent years (2013, 2014).
ENA-FIRST-PUBLIC
2020-09-08T17:06:10Z
ENA-LAST-UPDATE
2020-08-07T03:49:46Z
External Id
SAMEA7131579
INSDC center name
THUENEN INSTITUTE OF BIODIVERSITY
INSDC first public
2020-09-08T17:06:10Z
INSDC last update
2020-08-07T03:49:46Z
INSDC status
public
Submitter Id
IR_CON_NS-5_2013_nirK
collection date
2013
environment (biome)
soil
environment (feature)
agricultural soil
environment (material)
rhizosphere
geographic location (country and/or sea)
Ireland
geographic location (depth)
0.1-0.3
geographic location (elevation)
0
geographic location (latitude)
52.8560556
geographic location (longitude)
-6.912111111
investigation type
metagenome
project name
AMIGA
sample name
IR_CON_NS-5_2013_nirK
scientific_name
metagenome
sequencing method
MiSeq Illumina
soil environmental package
soil