marine metagenome
This sample (TARA_N000000007) was collected during the Tara Oceans expedition (2009-2013) at station TARA_039 (latitudeN=18.5839, longitudeE=66.4727) on date/time=2010-03-18T11:33, using a PUMP (High Volume Peristaltic Pump) with ECOTriplet. The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 23-27 m, targeting a deep chlorophyll maximum layer (ENVO:xxxxxxxx) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-5 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis.
Chlorophyll Sensor
0.17638
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2010-03-18T12:32
External Id
SAMEA2620089
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:08Z
INSDC last update
2015-11-04T11:48:24Z
INSDC status
public
Latitude End
18.5679
Longitude End
66.4581
Salinity Sensor
36.332317
Submitter Id
TARA_N000000007
depth
25
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
deep chlorophyll maximum layer (ENVO:xxxxxxxx)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2010-03-18T11:33
event label
TARA_20100318T1133Z_039_EVENT_PUMP
further details
tbd
last update date
2014-05-01Z
latitude start
18.5839
longitude start
66.4727
nitrate sensor
-0.611888
oxygen sensor
192.95875
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-RNA(100L)_W0.8-5
sample collection device
PUMP (High Volume Peristaltic Pump) with ECOTriplet
sample name
TARA_N000000007
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20100309Z
sampling platform
SV Tara
sampling station
TARA_039
size fraction lower threshold
0.8
size fraction upper threshold
5
temperature
26.812225