marine metagenome
This sample (TARA_N000002354) was collected during the Tara Oceans expedition (2009-2013) at station TARA_131 (latitudeN=22.7901, longitudeE=-157.9439) on date/time=2011-09-30T17:37:06, using a ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles. The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 106-115 m, targeting a deep chlorophyll maximum layer (ENVO:xxxxxxxx) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-5 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis.
Chlorophyll Sensor
0.187601
Citation
tbd
ENA first public
2015-05-05
ENA last update
2015-11-04
Event Date/Time End
2011-09-30T20:10
External Id
SAMEA2623037
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2015-05-05T17:02:09Z
INSDC last update
2015-11-04T11:49:43Z
INSDC status
public
Latitude End
22.7704
Longitude End
-157.9932
Salinity Sensor
35.303945
Submitter Id
TARA_N000002354
depth
110
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
deep chlorophyll maximum layer (ENVO:xxxxxxxx)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2011-09-30T17:37:06
event label
TARA_20110930T1738Z_131_Combined-EVENTS_CAST
further details
tbd
last update date
2014-05-01Z
latitude start
22.7901
longitude start
-157.9439
nitrate sensor
-0.736436
oxygen sensor
206.826733
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-RNA(100L)_W0.8-5
sample collection device
ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles
sample name
TARA_N000002354
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20110928Z
sampling platform
SV Tara
sampling station
TARA_131
size fraction lower threshold
0.8
size fraction upper threshold
5
temperature
22.392973