uncultured Oscillospiraceae bacterium
ENA-FIRST-PUBLIC
2020-09-09T17:06:41Z
ENA-LAST-UPDATE
2020-08-21T13:42:38Z
External Id
SAMEA7202122
INSDC center name
THE ROSLIN INSTITUTE
INSDC first public
2020-09-09T17:06:41Z
INSDC last update
2020-08-21T13:42:38Z
INSDC status
public
Submitter Id
Chicken_10_mag_107
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
Metabat2
binning parameters
-v -m 2000
binning software
Metabat2
collection date
not collected
common name
uncultured Oscillospiraceae bacterium
completeness score
83.65
completeness software
CheckM
contamination score
0
environment (biome)
Gallus gallus domesticus
environment (feature)
Caeca
environment (material)
Gut contents
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
55.86513
geographic location (longitude)
-3.197356
investigation type
metagenome
isolation source
metagenome
metagenomic source
Gallus gallus
project name
PRJEB33338
sample derived from
ERS3558285
sample name
Chicken_10_mag_107
scientific_name
uncultured Oscillospiraceae bacterium
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
CheckM_markers