bird metagenome
ENA first public
2016-08-17
ENA last update
2016-08-16
External Id
SAMEA4379885
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-08-17T17:01:12Z
INSDC last update
2016-08-16T03:26:03Z
INSDC status
public
Submitter Id
qiita_sid_1098:1098.919
altitude
0
anonymized name
body.919.2013
assigned_from_geo
True
biological_specimen
Tachycineta bicolor
body habitat
UBERON:body
body product
UBERON:plumage
body site
UBERON:sebum
collection_timestamp
Missing: Not provided
cornell_id
919
depth
0
dna_extracted
True
elevation
1624.1
emp_id
fecal4.NY.2013.919
env biome
temperate forest biome
env feature
animal-associated habitat
env matter
sebum
env package
host-associated
env_material
sebum
geo loc name
USA
has_physical_specimen
True
host common name
tree swallow
host scientific name
Tachycineta bicolor
host subject id
body.919.2013
host taxid
72873
latitude
40.1
longitude
-107.2
misc_param
Every sample represents 10 seconds of swabbing. In the case of nest samples, collectors were instructed to swab all areas of the nest cup (not the wooden nestbox that the nest cup is resting in). And for egg samples, all eggs present were swabbed for a total of 10 seconds regardless of how many eggs were present.
physical_specimen_location
Cornell
physical_specimen_remaining
False
public
True
required_sample_info_status
completed
sample name
qiita_sid_1098:1098.919
sample type
plumage
sample_code_1
2.0
sample_code_2
2.0
site
CU 1
site id
NY
sort
1255.0
sort_juanma
1255.0
state
NY
state_year
NY_2013
time collected
Missing: Not provided
year
2013