human gut metagenome
ENA-FIRST-PUBLIC
2015-05-08T17:01:11Z
ENA-LAST-UPDATE
2018-03-09T13:24:25Z
External Id
SAMEA3376311
INSDC center name
CCME-COLORADO
INSDC first public
2015-05-08T17:01:11Z
INSDC last update
2018-03-09T13:24:25Z
INSDC status
suppressed
Submitter Id
qiime_ppdid_183:10129.000016012
acne_medication
No
acne_medication_otc
No
add_adhd
I do not have this condition
age_months
401
age_years
33.4166666667
alcohol_frequency
Occasionally (1-2 times/week)
alcohol_types_beer_cider
Yes
alcohol_types_red_wine
Yes
alcohol_types_sour_beers
No
alcohol_types_spirits_hard_alcohol
Yes
alcohol_types_unspecified
No
alcohol_types_white_wine
Yes
allergic_to_i_have_no_food_allergies_that_i_know_of_
Yes
allergic_to_other
No
allergic_to_peanuts
No
allergic_to_shellfish
No
allergic_to_tree_nuts
No
allergic_to_unspecified
No
altitude
0
alzheimers
I do not have this condition
anonymized_name
000016012
antibiotic_condition
NaN
antibiotic_med
NaN
antibiotic_select
Year
appendix_removed
No
asd
I do not have this condition
assigned_from_geo
Yes
autoimmune
I do not have this condition
birth_month
November
birth_year
1981
bmi
20.5693296602
body_habitat
UBERON:feces
body_product
UBERON:feces
body_site
UBERON:feces
bowel_movement_frequency
Two
bowel_movement_quality
I tend to be constipated (have difficulty passing stool)
breastmilk_formula_ensure
No
cardiovascular_disease
I do not have this condition
cat
Yes
cat_contact
not currently living at home. been travelling for most of last 18months. currently staying in house with cat (1 month) and have contact with cat about 5 times per week. also daily contact with dog.
cat_location
outdoor
cdiff
I do not have this condition
chickenpox
Not sure
clinical_condition
Diagnosed by a medical professional (doctor, physician assistant)
collection_timestamp
2014-11-02 00:00:00
common_name
human gut metagenome
conditions_medication
Yes
consume_animal_products_abx
Yes
contraceptive
No
cosmetics_frequency
Regularly (3-5 times/week)
country_of_birth
United Kingdom
csection
No
deodorant_use
I use deodorant
depression_bipolar_schizophrenia
Diagnosed by a medical professional (doctor, physician assistant)
depth
0
diabetes
I do not have this condition
diet_restrictions_list
fodmap incl intolerant to dairy. not able to eat wheat, rye or barley but not due to gluten as per fodmap theory
diet_type
Omnivore
dna_extracted
True
dog
Yes
dog_contact
never owned a dog but currently in daily contact with one.
dog_location
outdoor
drinking_water_source
City
elevation
22.5743923187
env_biome
ENVO:dense settlement biome
env_feature
ENVO:human-associated habitat
env_matter
ENVO:feces
epilepsy_or_seizure_disorder
I do not have this condition
exercise_frequency
Rarely (a few times/month)
exercise_location
Depends on the season
fed_as_infant
Primarily infant formula
fermented_plant_frequency
Never
flossing_frequency
Occasionally (1-2 times/week)
flu_vaccine_date
I have not gotten the flu vaccine in the past year.
frozen_desert_frequency
Rarely (less than once/week)
fruit_frequency
Occasionally (1-2 times/week)
fungal_overgrowth
Self-diagnosed
gender
female
gluten
Unspecified
hand
I am right handed
height_cm
165.0
height_or_length
165.0
height_units
centimeters
high_fat_red_meat_frequency
Rarely (less than once/week)
homecooked_meals_frequency
Daily
host subject id
ab9768265dac14bf887a48d68af4c9dc
host_taxid
9606
ibd
Unspecified
ibs
Diagnosed by a medical professional (doctor, physician assistant)
kidney_disease
I do not have this condition
lactose
Yes
last_move
Unspecified
last_travel
Month
latitude
52.2003737
level_of_education
Bachelor's degree
liver_disease
I do not have this condition
livingwith
No
longitude
-2.2270653
lowgrain_diet_type
Yes
lung_disease
I do not have this condition
meat_eggs_frequency
Regularly (3-5 times/week)
medication_list
antihystemenes for urticarea
migraine
Self-diagnosed
milk_cheese_frequency
Never
milk_substitute_frequency
Regularly (3-5 times/week)
multivitamin
No
nail
Yes
non_food_allergies_beestings
No
non_food_allergies_drug__e_g__penicillin_
Yes
non_food_allergies_pet_dander
No
non_food_allergies_poison_ivy_oak
No
non_food_allergies_sun
Yes
non_food_allergies_unspecified
No
olive_oil
Occasionally (1-2 times/week)
one_liter_of_water_a_day_frequency
Daily
other_condtitions_list
IBS
other_supplement_frequency
Yes
physical_specimen_location
UCSDMI
physical_specimen_remaining
True
pku
I do not have this condition
pool_frequency
Rarely (a few times/month)
poultry_frequency
Rarely (less than once/week)
pregnant
No
pregnant_due_date
NaN
prepared_meals_frequency
Rarely (less than once/week)
probiotic_frequency
Occasionally (1-2 times/week)
public
y
race
Caucasian
race_other
NaN
ready_to_eat_meals_frequency
Rarely (less than once/week)
red_meat_frequency
Rarely (less than once/week)
relationships_with_others_in_study
NaN
required_sample_info_status
completed
roommates
Unspecified
roommates_in_study
No
salted_snacks_frequency
Occasionally (1-2 times/week)
sample name
qiime_ppdid_183:10129.000016012
sample_type
Stool
scientific_name
human gut metagenome
seafood_frequency
Rarely (less than once/week)
seasonal_allergies
Yes
sex
female
sibo
I do not have this condition
skin_condition
Diagnosed by a medical professional (doctor, physician assistant)
sleep_duration
6-7 hours
smoking_frequency
Rarely (a few times/month)
softener
No
special_restrictions
Yes
sugar_sweetened_drink_frequency
Never
sugary_sweets_frequency
Regularly (3-5 times/week)
supplements
calcium, sometimes also vit c, b vits and probiotics but not on week of test
teethbrushing_frequency
Daily
thyroid
I do not have this condition
tonsils_removed
No
tot_mass
56.0
travel_locations_list
reside in UK. currently in USA for 6 months. in last year have spent 3months in Hawaii, 3 months between Mexico, Guatemala, Belize and Cuba and some time in UK and Italy.
vegetable_frequency
Occasionally (1-2 times/week)
vitamin_b_supplement_frequency
Occasionally (1-2 times/week)
vitamin_d_supplement_frequency
Regularly (3-5 times/week)
weight_change
Remained stable
weight_kg
56.0
weight_units
kilograms
whole_eggs
Rarely (less than once/week)
whole_grain_frequency
Occasionally (1-2 times/week)
willing_to_be_contacted
Yes
zip_code
94110