human gut metagenome
ENA first public
2016-10-14
ENA last update
2016-10-14
External Id
SAMEA4507002
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-10-14T17:01:47Z
INSDC last update
2016-10-14T01:31:45Z
INSDC status
public
Submitter Id
qiita_sid_10564:10564.XI91FUC4
aborh
A-
age
65
age units
years
agvhd_gut
negative
agvhd_organ
None documented
agvhd_severity
no
anc_engrafment
no
blood_type_donor1
O+
blood_type_donor2
Missing: Not applicable
bmi
28
body habitat
UBERON:feces
body product
UBERON:feces
body site
UBERON:feces
chemotherapy_regimen
Flu/TBI
cmv status
positive
collection_timestamp
Missing: Restricted access
conditioning_intensity
Low intensity
cyclosporine
yes
cytogenetics
abnormal
days_at_relapse
148
days_to_anc_engrafment
Missing: Not applicable
days_to_platelet_engrafment
Missing: Not applicable
deceased
1
disease
AML
disease_status_at_transplant
remission
dna_extracted
TRUE
donor id
Missing: Not applicable
donor source
pbsc
donor type
unrelated
donor1_cmv_status
negative
donor1_match
10/10
donor1_sex
female
donor2_cmv_status
Missing: Not applicable
donor2_match
Missing: not applicable
donor2_sex
Missing: Not applicable
donor_or_patient
Patient
elevation
1564
env biome
urban biome
env feature
human-associated habitat
env package
human-gut
env_material
feces
etiology_of_death
Missing: Not collected
geo loc name
USA:CO
gi_history_details
GERD
haplotype
A2/2, B7/44, C2/7, DR15/15, DQ5/6
host common name
human
host scientific name
Homo sapiens
host subject id
XI91FUC4
host taxid
9606
infection_details
Missing: Not applicable
infection_prior_to_transplant
no
latitude
39.76
longitude
-104.88
methotrexate
no
mmf
yes
other_viruses
EBV, HSV, VZV
pb_cd3_1_year
Missing: Not collected
pb_cd3_day_100
32
pb_cd3_day_180
0
pb_cd3_day_30
27
pb_unfx_1_year
Missing: Not collected
pb_unfx_day_100
Missing: Not collected
pb_unfx_day_180
Missing: Not collected
pb_unfx_day_30
Missing: Not collected
physical_specimen_location
University of Colorado, Anschutz
physical_specimen_remaining
FALSE
platelet_engrafment
no
race
white
relapsed
yes
right_censor_time
694
sample name
qiita_sid_10564:10564.XI91FUC4
sample type
stool
sex
male
sirolimus
no
tacrolimus
no
time_to_agvhd
Missing: Not applicable
time_to_cgvhd
Missing: Not applicable
time_to_death
694