mouse gut metagenome
chimera_check
Uchime
collection_date
2017-03-18
description
Mouse:B3 Day:4 Treatment_group:indo
env_biome
Mus Musculus-Gut-bacteria
env_feature
C57BL/6-Gut
host
mouse
env_material
feces
experimental_factor
Impact of indomethacin on the gut microbiota
geo_loc_name
USA: TN, Nashville
lat_lon
36.1397 N 86.8016 W
lib_const_meth
amplicon
lib_size
300
nucl_acid_amp
http://aem.asm.org/content/79/17/5112.long
nucl_acid_ext
MoBio PowerSoil® Soil DNA Isolation Kit
organism
mouse gut metagenome
pcr_cond
http://aem.asm.org/content/79/17/5112.long
project_name
Nonsteroidal Anti-inflammatory Drugs Increase the Severity of Clostridium difficile in the Mouse while Dysregulating Protective Inflammatory Responses and the Microbiome
samp_store_temp
-20
sample_title
murine-feces
seq_methods
illumina
sfffile_id_R1
Plate3_644-LK-27_S217_R1_001.fastq
sfffile_id_R2
Plate3_644-LK-27_S217_R2_001.fastq
target_gene
16S rRNA
target_subfragment
V4
BioSampleModel
MIMARKS.survey
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated