human gut metagenome
ENA-FIRST-PUBLIC
2015-05-08T17:01:12Z
ENA-LAST-UPDATE
2018-03-09T13:24:41Z
External Id
SAMEA3376596
INSDC center name
CCME-COLORADO
INSDC first public
2015-05-08T17:01:12Z
INSDC last update
2018-03-09T13:24:41Z
INSDC status
suppressed
Submitter Id
qiime_ppdid_183:10129.000021284
acne_medication
No
acne_medication_otc
No
add_adhd
I do not have this condition
age_months
335
age_years
27.9166666667
alcohol_frequency
Never
alcohol_types_beer_cider
No
alcohol_types_red_wine
No
alcohol_types_sour_beers
No
alcohol_types_spirits_hard_alcohol
No
alcohol_types_unspecified
Yes
alcohol_types_white_wine
No
allergic_to_i_have_no_food_allergies_that_i_know_of_
No
allergic_to_other
Yes
allergic_to_peanuts
No
allergic_to_shellfish
No
allergic_to_tree_nuts
No
allergic_to_unspecified
No
altitude
0
alzheimers
I do not have this condition
anonymized_name
000021284
antibiotic_condition
NaN
antibiotic_med
NaN
antibiotic_select
Year
appendix_removed
No
asd
I do not have this condition
assigned_from_geo
Yes
autoimmune
I do not have this condition
birth_month
May
birth_year
1987
bmi
25.5077952509
body_habitat
UBERON:feces
body_product
UBERON:feces
body_site
UBERON:feces
bowel_movement_frequency
One
bowel_movement_quality
I tend to be constipated (have difficulty passing stool)
breastmilk_formula_ensure
No
cardiovascular_disease
I do not have this condition
cat
Yes
cat_contact
my parents have, so only interact with a few times a month currently (i am allergic to cats)
cat_location
indoor
cdiff
I do not have this condition
chickenpox
Yes
clinical_condition
Diagnosed by a medical professional (doctor, physician assistant)
collection_timestamp
2014-11-13 00:00:00
common_name
human gut metagenome
conditions_medication
No
consume_animal_products_abx
No
contraceptive
No
cosmetics_frequency
Rarely (a few times/month)
country_of_birth
United States
csection
No
deodorant_use
I do not use deodorant or an antiperspirant
depression_bipolar_schizophrenia
Diagnosed by a medical professional (doctor, physician assistant)
depth
0
diabetes
I do not have this condition
diet_restrictions_list
no eggs, no gluten, no added sugar, no GMO (as much as possible), no dairy, no nightshades, modified paleo diet including above as of 1 month ago (before that ate standard american diet for most of life)
diet_type
Omnivore
dna_extracted
True
dog
No
dog_contact
NaN
dog_location
NaN
drinking_water_source
Filtered
elevation
135.000549316
env_biome
ENVO:dense settlement biome
env_feature
ENVO:human-associated habitat
env_matter
ENVO:feces
epilepsy_or_seizure_disorder
I do not have this condition
exercise_frequency
Rarely (a few times/month)
exercise_location
Depends on the season
fed_as_infant
Primarily breast milk
fermented_plant_frequency
Rarely (less than once/week)
flossing_frequency
Occasionally (1-2 times/week)
flu_vaccine_date
I have not gotten the flu vaccine in the past year.
frozen_desert_frequency
Never
fruit_frequency
Never
fungal_overgrowth
Self-diagnosed
gender
female
geographic location (country and/or sea)
USA: GAZ
gluten
I do not eat gluten because it makes me feel bad
hand
I am right handed
height_cm
154.94
height_or_length
154.94
height_units
centimeters
high_fat_red_meat_frequency
Occasionally (1-2 times/week)
homecooked_meals_frequency
Daily
host subject id
98334c06283277a9f1c35ce08e8dd2b1
host_taxid
9606
ibd
I do not have this condition
ibs
Diagnosed by a medical professional (doctor, physician assistant)
kidney_disease
I do not have this condition
lactose
No
last_move
Within the past 3 months
last_travel
I have not been outside of my country of residence in the past year.
latitude
40.7985699
level_of_education
Graduate or Professional degree
liver_disease
I do not have this condition
livingwith
No
longitude
-74.2390828
lowgrain_diet_type
Yes
lung_disease
Diagnosed by a medical professional (doctor, physician assistant)
meat_eggs_frequency
Daily
medication_list
NaN
migraine
Self-diagnosed
milk_cheese_frequency
Never
milk_substitute_frequency
Regularly (3-5 times/week)
multivitamin
No
nail
No
non_food_allergies_beestings
No
non_food_allergies_drug__e_g__penicillin_
No
non_food_allergies_pet_dander
Yes
non_food_allergies_poison_ivy_oak
No
non_food_allergies_sun
No
non_food_allergies_unspecified
No
olive_oil
Daily
one_liter_of_water_a_day_frequency
Daily
other_condtitions_list
epstein bar, sibo, sinus infections, uti_s, yeast infections, asthma (self diagnosed_ candida, parasite, adrenal fatigue, thyroid and hormone challenges)
other_supplement_frequency
Yes
physical_specimen_location
UCSDMI
physical_specimen_remaining
True
pku
I do not have this condition
pool_frequency
Never
poultry_frequency
Regularly (3-5 times/week)
pregnant
No
pregnant_due_date
NaN
prepared_meals_frequency
Regularly (3-5 times/week)
probiotic_frequency
Daily
public
y
race
Caucasian
race_other
NaN
ready_to_eat_meals_frequency
Never
red_meat_frequency
Rarely (less than once/week)
relationships_with_others_in_study
NaN
required_sample_info_status
completed
roommates_in_study
No
salted_snacks_frequency
Never
sample name
qiime_ppdid_183:10129.000021284
sample_type
Stool
scientific_name
human gut metagenome
seafood_frequency
Regularly (3-5 times/week)
seasonal_allergies
Yes
sex
female
sibo
Diagnosed by a medical professional (doctor, physician assistant)
skin_condition
I do not have this condition
sleep_duration
7-8 hours
smoking_frequency
Never
softener
No
special_restrictions
Yes
sugar_sweetened_drink_frequency
Never
sugary_sweets_frequency
Never
supplements
B vitamins, zinc, vitamin c, milk thistle (started all of these about a week ago)
teethbrushing_frequency
Daily
thyroid
Self-diagnosed
tonsils_removed
No
tot_mass
61.2350427738
travel_locations_list
NaN
vegetable_frequency
Daily
vitamin_b_supplement_frequency
Regularly (3-5 times/week)
vitamin_d_supplement_frequency
Regularly (3-5 times/week)
weight_change
Decreased more than 10 pounds
weight_kg
61.2350427738
weight_units
kilograms
whole_eggs
Never
whole_grain_frequency
Never
willing_to_be_contacted
Yes
zip_code
10016