bird metagenome
ENA first public
2016-08-17
ENA last update
2016-08-16
External Id
SAMEA4379951
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-08-17T17:01:11Z
INSDC last update
2016-08-16T03:26:04Z
INSDC status
public
Submitter Id
qiita_sid_1098:1098.AMF.F160
altitude
0
anonymized name
fecal.AMF-F160.2013
assigned_from_geo
True
biological_specimen
Tachycineta bicolor
body habitat
UBERON:feces
body product
UBERON:feces
body site
UBERON:feces
collection_timestamp
06/12/2010
cornell_id
802
depth
0
dna_extracted
True
egg_id
I-28
elevation
1624.1
emp_id
feces.NY.2010.802
env biome
temperate forest biome
env feature
animal-associated habitat
env matter
feces
env package
host-associated
env_material
feces
geo loc name
USA
has_physical_specimen
True
host common name
tree swallow
host scientific name
Tachycineta bicolor
host subject id
fecal.AMF-F160.2013
host taxid
72873
latitude
42.502888
longitude
-76.43735799999999
misc_param
Every sample represents 10 seconds of swabbing. In the case of nest samples, collectors were instructed to swab all areas of the nest cup (not the wooden nestbox that the nest cup is resting in). And for egg samples, all eggs present were swabbed for a total of 10 seconds regardless of how many eggs were present.
nest id
CU2B112
physical_specimen_location
Cornell
physical_specimen_remaining
False
public
True
required_sample_info_status
completed
sample name
qiita_sid_1098:1098.AMF.F160
sample type
feces
sample_code_1
2.0
sample_code_2
4.0
site
CU 2
site id
NY
sort
1138.0
sort_juanma
1138.0
state
NY
state_year
NY_2010
time collected
Missing: Not provided
year
2010