coral metagenome
collection_date
2013
depth
498 m
env_biome
marine
env_feature
not applicable
env_material
Coral tissue
geo_loc_name
Atlantic Ocean: Norfolk Canyon
host
Primnoa resedaeformis
lat_lon
37.071597 N 74.649191 W
lib_size
6207
mid
CTCGCGTGTC
nucl_acid_amp
doi:10.1093/nar/gkq876
nucl_acid_ext
doi:10.1371/journal.pone.0009557
pcr_primers
FWD: 5_ AYTGGGYDTAAAGNG, REV:5_ CCGTCAATTYYTTTRAGTTT
project_name
16S amplicons from cold water coral microbiomes ofÊPrimnoa resedaeformis
salinity
35.0 psu
samp_collect_device
Remotely-operated vehicle (ROV)
samp_mat_process
Preserved using RNAlater overnight at 4 ûC before extended storage in -20 ûC
samp_size
~ 50 mg
samp_store_temp
neg 20 C
seq_meth
GS FLX 454 pyrosequencing
source_material_id
Coral tissue
target_gene
16S rRNA
target_subfragment
V4-V5
temp
6.3 C
BioSampleModel
MIMARKS.survey
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated