sediment metagenome
Lake sediment samples taken from core (1 cm per sample). Extraction, PCR
ENA-FIRST-PUBLIC
2012-02-29T17:00:50Z
ENA-KEYWORD
GSC, MIxS, MIMARKS
ENA-LAST-UPDATE
2018-03-09T09:57:36Z
External Id
SAMEA1094784
Geographic location (country:region,area)
Norway
INSDC center name
CGG-UCop
INSDC first public
2012-02-29T17:00:50Z
INSDC last update
2018-03-09T09:57:36Z
INSDC status
public
Sequencing method
Pyrosequencing
Submitter Id
And�ya_9.70-9.71
amount or size of sample collected
10
collection date
2002
depth
9.70-9.71
enviornmental package
sediment
environment (biome)
Freshwater biome. ENVO:00000873
environment (featurel)
Fresh water habitat ENVO:00002037
environment (material)
Lake sediment. ENVO:00000546
geographic location (latitude)
69.25
geographic location (longitude)
16.08333333333
investigation type
MIxS
pcr conditions
Initial denaturation:94degC_4min; Denaturation:94degC_45sec; Annealing:55-57degC_45sec; Extension:68degC_45sec; Cycles:55-60; Final elongation:70degC_10min. Final hold:4degC_forever
pcr primers
trnL_g: GGGCAATCCTGAGCCAA; trnL_h: CCATTGAGTCTCTGCACCTATC
project name
Sequences Andøya
sample name
And�ya_9.70-9.71
sample storage temperature
4
scientific_name
sediment metagenome
sequencing method
Pyrosequencing
target gene
trnL