Severe acute respiratory syndrome coronavirus 2
isolate
SARS-CoV-2/Human/USA/Unk-CDC-STM-A100430/2021
collected_by
Helix
collection_date
2021-01-06
geo_loc_name
USA
host
Homo sapiens
host_disease
COVID-19
isolation_source
nasal
lat_lon
missing
host_age
25
host_sex
male
GISAID_virus_name
hCoV-19/USA/Unk-CDC-STM-A100430/2021
sequenced_by
Illumina
host_anatomical_part
Nasal
collection_device
Swabs
collection_method
Swabs
diagnostic_gene_name_1
ms2
diagnostic_pcr_protocol_1
ThermoFisher Taqpath Assay
diagnostic_pcr_Ct_value_1
26.626451492
diagnostic_gene_name_2
n gene
diagnostic_pcr_protocol_2
ThermoFisher Taqpath Assay
diagnostic_pcr_Ct_value_2
24.822483063
diagnostic_gene_name_3
orf1ab
diagnostic_pcr_protocol_3
ThermoFisher Taqpath Assay
diagnostic_pcr_Ct_value_3
26.341938019
diagnostic_gene_name_4
s gene
diagnostic_pcr_protocol_4
ThermoFisher Taqpath Assay
lineage/clade name
B.1.5
host_race
Latino
BioSampleModel
Pathogen.cl