10512.EV
human gut metagenome
ileostomy
ENA first public
2016-06-01
ENA last update
2016-05-27
External Id
SAMEA4016059
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-06-01T17:01:04Z
INSDC last update
2016-05-27T23:02:12Z
INSDC status
public
Submitter Id
qiita_sid_10512:10512.EV
age
7
age cat
under 3
age unit
months
anonymized name
EV
body habitat
UBERON:ileum
breastmilk
1
chao1_mean
189.5402778
chao1_med
183.9545455
chao1_stdv
38.02230301
colitis_atresia
Small Intestine Colitis
collection_timestamp
7/16/13
diagnosis
NEC (interval stoma takedown)
diagnosis_simple
NEC
diet
fed
dna_extracted
True
elevation
93
env package
host-associated
etiology
infectious
experiment_design_description
Zebrafish
host common name
human
host subject id
H022
individual
H022
latitude
34.05
longitude
-118.25
luminal_status
small intestine fed
mastermix_id
14509333
observed_species_mean
73.2
observed_species_med
74.5
observed_species_stdv
3.966526608
orig name
EV
pd_whole_tree_mean
6.60405
pd_whole_tree_med
6.54358
pd_whole_tree_stdv
0.564674963
physical_specimen_location
UCSDMI
physical_specimen_remaining
False
primer_date
22114
primer_plate
6
processing_robot
JERE
project name
CHLA
sample center
CHLA
sample name
qiita_sid_10512:10512.EV
sample type
ileostomy
sample_name_old
44a
sample_plate
CHLA_Plate2
sex
male
shannon_mean
1.607144168
shannon_med
1.617945102
shannon_stdv
0.0353625