10512.EJ.2
human gut metagenome
colostomy
ENA first public
2016-06-01
ENA last update
2016-05-27
External Id
SAMEA4016052
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-06-01T17:01:04Z
INSDC last update
2016-05-27T23:02:11Z
INSDC status
public
Submitter Id
qiita_sid_10512:10512.EJ.2
age
5
age cat
under 3
age unit
months
anonymized name
EJ
body habitat
UBERON:colon
breastmilk
1
chao1_mean
416.4866595
chao1_med
424.0625
chao1_stdv
39.66761042
colitis_atresia
Colon Atresia
collection_timestamp
4/11/13
diagnosis
Imperforate anus (interval stoma takedown)
diagnosis_simple
atresia
diet
fed
dna_extracted
True
elevation
93
env package
host-associated
etiology
obstructive
experiment_design_description
Zebrafish
host common name
human
host subject id
H015
individual
H015
latitude
34.05
longitude
-118.25
luminal_status
colon fed
mastermix_id
14509333
observed_species_mean
182.6
observed_species_med
183.5
observed_species_stdv
3.533962208
orig name
EJ.2
pd_whole_tree_mean
11.339114
pd_whole_tree_med
11.33368
pd_whole_tree_stdv
0.195623024
physical_specimen_location
UCSDMI
physical_specimen_remaining
False
primer_date
22114
primer_plate
7
processing_robot
ROBE
project name
CHLA
sample center
CHLA
sample name
qiita_sid_10512:10512.EJ.2
sample type
colostomy
sample_name_old
34a
sample_plate
CHLA_Plate3
sex
male
shannon_mean
4.243978111
shannon_med
4.242929964
shannon_stdv
0.02656617