10512.GF.2
human gut metagenome
Rectal fistula
ENA first public
2016-06-01
ENA last update
2016-05-27
External Id
SAMEA4016076
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-06-01T17:01:04Z
INSDC last update
2016-05-27T23:02:12Z
INSDC status
public
Submitter Id
qiita_sid_10512:10512.GF.2
age
2
age cat
under 3
age unit
months
anonymized name
GF
body habitat
UBERON:rectum
chao1_mean
478.7589927
chao1_med
468.6071429
chao1_stdv
70.30664831
colitis_atresia
Colon Atresia
collection_timestamp
9/4/13
diagnosis
Imperforate anus (PSARP)
diagnosis_simple
atresia
diet
fed
dna_extracted
True
elevation
93
env package
host-associated
experiment_design_description
2 projects: mouse experimental regeneration of intestinal
host common name
human
host subject id
H030
individual
H030
latitude
34.05
longitude
-118.25
mastermix_id
14509333
observed_species_mean
147.5
observed_species_med
148.5
observed_species_stdv
3.689323937
orig name
GF.2
pd_whole_tree_mean
10.43635
pd_whole_tree_med
10.44057
pd_whole_tree_stdv
0.284418655
physical_specimen_location
UCSDMI
physical_specimen_remaining
False
primer_date
22114
primer_plate
7
processing_robot
ROBE
project name
CHLA
sample center
CHLA
sample name
qiita_sid_10512:10512.GF.2
sample type
Rectal fistula
sample_name_old
55
sample_plate
CHLA_Plate3
sex
male
shannon_mean
3.768782157
shannon_med
3.768224764
shannon_stdv
0.026879403