10512.AH
human gut metagenome
ileum
ENA first public
2016-06-01
ENA last update
2016-05-27
External Id
SAMEA4016044
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-06-01T17:01:04Z
INSDC last update
2016-05-27T23:02:11Z
INSDC status
public
Submitter Id
qiita_sid_10512:10512.AH
age
20
age cat
under 3
age unit
months
anonymized name
AH
body habitat
UBERON:cecum
body product
UBERON:cecum mucosa
body site
UBERON:cecum mucosa
breastmilk
0
chao1_mean
433.0869845
chao1_med
426.1791667
chao1_stdv
53.48449056
collection_timestamp
2/7/13
diagnosis
Midgut volvulous (acute)
diet
fed
dna_extracted
True
elevation
93
env biome
human-associated habitat
env feature
human-associated habitat
env package
host-associated
env_material
feces
experiment_design_description
2 projects: mouse experimental regeneration of intestinal lining from stem cells; human experimental
host common name
human
host subject id
H012
individual
H012
latitude
34.05
longitude
-118.25
luminal_status
colon fed
mastermix_id
14509333
observed_species_mean
170.1
observed_species_med
172.5
observed_species_stdv
8.171087239
orig name
AH
pd_whole_tree_mean
11.922478
pd_whole_tree_med
11.74224
pd_whole_tree_stdv
0.324472571
physical_specimen_location
UCSDMI
physical_specimen_remaining
False
primer_date
22114
primer_plate
5
processing_robot
JERE
project name
CHLA
sample center
CHLA
sample name
qiita_sid_10512:10512.AH
sample type
ileum
sample_name_old
29a.829954
sample_plate
CHLA_Plate1
sex
male
shannon_mean
4.099854643
shannon_med
4.113497317
shannon_stdv
0.05849128