10512.EK
human gut metagenome
colon mucous fistula
ENA first public
2016-06-01
ENA last update
2016-05-27
External Id
SAMEA4016053
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-06-01T17:01:04Z
INSDC last update
2016-05-27T23:02:11Z
INSDC status
public
Submitter Id
qiita_sid_10512:10512.EK
age
5
age cat
under 3
age unit
months
anonymized name
EK
body habitat
UBERON:colon
breastmilk
1
chao1_mean
301.7154743
chao1_med
301.9085366
chao1_stdv
11.83520158
colitis_atresia
Colon Atresia
collection_timestamp
4/11/13
diagnosis
Imperforate anus (interval stoma takedown)
diagnosis_simple
atresia
diet
unfed
dna_extracted
True
elevation
93
env package
host-associated
etiology
obstructive
experiment_design_description
Zebrafish
host common name
human
host subject id
H015
individual
H015
latitude
34.05
longitude
-118.25
luminal_status
colon unfed
mastermix_id
14509333
observed_species_mean
184.5
observed_species_med
185.0
observed_species_stdv
2.121320344
orig name
EK
pd_whole_tree_mean
10.09643
pd_whole_tree_med
10.15616
pd_whole_tree_stdv
0.190032353
physical_specimen_location
UCSDMI
physical_specimen_remaining
False
pouch
Fistula
primer_date
22114
primer_plate
5
processing_robot
JERE
project name
CHLA
sample center
CHLA
sample name
qiita_sid_10512:10512.EK
sample type
colon mucous fistula
sample_name_old
34b
sample_plate
CHLA_Plate1
sex
male
shannon_mean
4.280433371
shannon_med
4.279337207
shannon_stdv
0.010767087