10512.EF
human gut metagenome
colostomy
ENA first public
2016-06-01
ENA last update
2016-05-27
External Id
SAMEA4016050
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-06-01T17:01:04Z
INSDC last update
2016-05-27T23:02:11Z
INSDC status
public
Submitter Id
qiita_sid_10512:10512.EF
age
12
age cat
under 3
age unit
months
anonymized name
EF
body habitat
UBERON:colon
breastmilk
1
chao1_mean
666.8016903
chao1_med
670.2894737
chao1_stdv
27.05687233
colitis_atresia
Colon Atresia
collection_timestamp
10/24/12
diagnosis
Imperforate anus (interval stoma takedown)
diagnosis_simple
atresia
diet
fed
dna_extracted
True
elevation
93
env package
host-associated
etiology
obstructive
experiment_design_description
Zebrafish
host common name
human
host subject id
H001
individual
H001
latitude
34.05
longitude
-118.25
luminal_status
colon fed
mastermix_id
14509333
observed_species_mean
307.7
observed_species_med
304.0
observed_species_stdv
8.179242019
orig name
EF
pd_whole_tree_mean
16.495392
pd_whole_tree_med
16.618045
pd_whole_tree_stdv
0.824518737
physical_specimen_location
UCSDMI
physical_specimen_remaining
False
primer_date
22114
primer_plate
6
processing_robot
JERE
project name
CHLA
sample center
CHLA
sample name
qiita_sid_10512:10512.EF
sample type
colostomy
sample_name_old
13a
sample_plate
CHLA_Plate2
sex
male
shannon_mean
5.790384014
shannon_med
5.795022053
shannon_stdv
0.04391559