10512.EK.2
human gut metagenome
colon mucous fistula
ENA first public
2016-06-01
ENA last update
2016-05-27
External Id
SAMEA4016054
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-06-01T17:01:04Z
INSDC last update
2016-05-27T23:02:11Z
INSDC status
public
Submitter Id
qiita_sid_10512:10512.EK.2
age
5
age cat
under 3
age unit
months
anonymized name
EK
body habitat
UBERON:colon
breastmilk
1
chao1_mean
400.7639449
chao1_med
385.5747863
chao1_stdv
74.96168742
colitis_atresia
Colon Atresia
collection_timestamp
4/11/13
diagnosis
Imperforate anus (interval stoma takedown)
diagnosis_simple
atresia
diet
unfed
dna_extracted
True
elevation
93
env package
host-associated
experiment_design_description
Zebrafish
host common name
human
host subject id
H015
individual
H015
latitude
34.05
longitude
-118.25
luminal_status
colon unfed
mastermix_id
14509333
observed_species_mean
180.3
observed_species_med
180.0
observed_species_stdv
4.57165178
orig name
EK.2
pd_whole_tree_mean
10.819659
pd_whole_tree_med
10.869715
pd_whole_tree_stdv
0.367436035
physical_specimen_location
UCSDMI
physical_specimen_remaining
False
primer_date
22114
primer_plate
7
processing_robot
ROBE
project name
CHLA
sample center
CHLA
sample name
qiita_sid_10512:10512.EK.2
sample type
colon mucous fistula
sample_name_old
34b
sample_plate
CHLA_Plate3
sex
male
shannon_mean
4.416775277
shannon_med
4.417800383
shannon_stdv
0.044595477