10512.EG.2
human gut metagenome
colon mucous fistula
ENA first public
2016-06-01
ENA last update
2016-05-27
External Id
SAMEA4016051
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-06-01T17:01:04Z
INSDC last update
2016-05-27T23:02:11Z
INSDC status
public
Submitter Id
qiita_sid_10512:10512.EG.2
age
12
age cat
under 3
age unit
months
anonymized name
EG
body habitat
UBERON:colon
breastmilk
1
chao1_mean
582.710183
chao1_med
579.974427
chao1_stdv
16.21872153
colitis_atresia
Colon Atresia
collection_timestamp
10/24/12
diagnosis
Imperforate anus (interval stoma takedown)
diagnosis_simple
atresia
diet
unfed
dna_extracted
True
elevation
93
env package
host-associated
etiology
obstructive
experiment_design_description
Zebrafish
host common name
human
host subject id
H001
individual
H001
latitude
34.05
longitude
-118.25
luminal_status
colon unfed
mastermix_id
14509333
observed_species_mean
403.9
observed_species_med
403.0
observed_species_stdv
3.142893218
orig name
EG.2
pd_whole_tree_mean
20.10193
pd_whole_tree_med
20.182585
pd_whole_tree_stdv
0.224867927
physical_specimen_location
UCSDMI
physical_specimen_remaining
False
pouch
Fistula
primer_date
22114
primer_plate
7
processing_robot
ROBE
project name
CHLA
sample center
CHLA
sample name
qiita_sid_10512:10512.EG.2
sample type
colon mucous fistula
sample_name_old
13b
sample_plate
CHLA_Plate3
sex
male
shannon_mean
6.162297483
shannon_med
6.165767784
shannon_stdv
0.019603095