10512.EY
human gut metagenome
colon mucous fistula
ENA first public
2016-06-01
ENA last update
2016-05-27
External Id
SAMEA4016061
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-06-01T17:01:04Z
INSDC last update
2016-05-27T23:02:12Z
INSDC status
public
Submitter Id
qiita_sid_10512:10512.EY
age
8
age cat
under 3
age unit
months
anonymized name
EY
body habitat
UBERON:colon
breastmilk
0
chao1_mean
316.2490476
chao1_med
309.1509804
chao1_stdv
62.41760109
colitis_atresia
Colon Atresia
collection_timestamp
7/30/13
diagnosis
Imperforate anus (interval stoma takedown)
diagnosis_simple
atresia
diet
unfed
dna_extracted
True
elevation
93
env package
host-associated
etiology
obstructive
experiment_design_description
Zebrafish
host common name
human
host subject id
H023
individual
H023
latitude
34.05
longitude
-118.25
luminal_status
colon unfed
mastermix_id
14509333
observed_species_mean
129.7
observed_species_med
130.0
observed_species_stdv
6.848357467
orig name
EY
pd_whole_tree_mean
9.194155
pd_whole_tree_med
9.385525
pd_whole_tree_stdv
0.690059275
physical_specimen_location
UCSDMI
physical_specimen_remaining
False
pouch
Fistula
primer_date
22114
primer_plate
6
processing_robot
JERE
project name
CHLA
sample center
CHLA
sample name
qiita_sid_10512:10512.EY
sample type
colon mucous fistula
sample_name_old
47b
sample_plate
CHLA_Plate2
sex
male
shannon_mean
4.080602315
shannon_med
4.082862135
shannon_stdv
0.03252916