10512.FB
human gut metagenome
ileum
ENA first public
2016-06-01
ENA last update
2016-05-27
External Id
SAMEA4016062
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-06-01T17:01:04Z
INSDC last update
2016-05-27T23:02:12Z
INSDC status
public
Submitter Id
qiita_sid_10512:10512.FB
age
156
age cat
Three or older
age unit
months
anonymized name
FB
body habitat
UBERON:ileum
breastmilk
0
chao1_mean
270.2398381
chao1_med
269.7678571
chao1_stdv
10.44964222
colitis_atresia
Small Intestine Colitis
collection_timestamp
8/13/13
diagnosis
Ulcerative colitis
diagnosis_simple
Ulcerative colitis
diet
fed
dna_extracted
True
elevation
93
env package
host-associated
experiment_design_description
Zebrafish
host common name
human
host subject id
H025
individual
H025
latitude
34.05
longitude
-118.25
luminal_status
small intestine fed
mastermix_id
14509333
observed_species_mean
228.9
observed_species_med
229.0
observed_species_stdv
4.677368681
orig name
FB
pd_whole_tree_mean
8.469728
pd_whole_tree_med
8.483085
pd_whole_tree_stdv
0.295483849
physical_specimen_location
UCSDMI
physical_specimen_remaining
False
primer_date
22114
primer_plate
6
processing_robot
JERE
project name
CHLA
sample center
CHLA
sample name
qiita_sid_10512:10512.FB
sample type
ileum
sample_name_old
50a (same as pt 21)
sample_plate
CHLA_Plate2
sex
female
shannon_mean
4.046669482
shannon_med
4.053148673
shannon_stdv
0.029773681
source
zebrafish