10512.FD.3
human gut metagenome
ileostomy
ENA first public
2016-06-01
ENA last update
2016-05-27
External Id
SAMEA4016064
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-06-01T17:01:04Z
INSDC last update
2016-05-27T23:02:12Z
INSDC status
public
Submitter Id
qiita_sid_10512:10512.FD.3
age
11
age cat
under 3
age unit
months
anonymized name
FD
body habitat
UBERON:ileum
breastmilk
1
chao1_mean
286.5186666
chao1_med
298.0263158
chao1_stdv
40.18480584
colitis_atresia
Small Intestine Colitis
collection_timestamp
8/20/13
diagnosis
NEC then HD (interval stoma takedown)
diagnosis_simple
NEC
diet
fed
dna_extracted
True
elevation
93
env package
host-associated
etiology
infectious
experiment_design_description
Zebrafish
host common name
human
host subject id
H026
individual
H026
latitude
34.05
longitude
-118.25
luminal_status
small intestine fed
mastermix_id
14509333
observed_species_mean
148.8
observed_species_med
148.5
observed_species_stdv
4.613988393
orig name
FD.3
pd_whole_tree_mean
10.275056
pd_whole_tree_med
10.45981
pd_whole_tree_stdv
0.539866937
physical_specimen_location
UCSDMI
physical_specimen_remaining
False
primer_date
22114
primer_plate
8
processing_robot
ROBE
project name
CHLA
sample center
CHLA
sample name
qiita_sid_10512:10512.FD.3
sample type
ileostomy
sample_name_old
52a
sample_plate
CHLA_Plate17
sex
male
shannon_mean
3.934125122
shannon_med
3.925378893
shannon_stdv
0.053838233