10512.FE.2
human gut metagenome
ileum hartmann
ENA first public
2016-06-01
ENA last update
2016-05-27
External Id
SAMEA4016065
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-06-01T17:01:04Z
INSDC last update
2016-05-27T23:02:12Z
INSDC status
public
Submitter Id
qiita_sid_10512:10512.FE.2
age
11
age cat
under 3
age unit
months
anonymized name
FE
body habitat
UBERON:ileum
breastmilk
1
chao1_mean
375.0378027
chao1_med
370.060794
chao1_stdv
18.76491299
colitis_atresia
Small Intestine Colitis
collection_timestamp
8/20/13
diagnosis
NEC then HD (interval stoma takedown)
diagnosis_simple
NEC
diet
unfed
dna_extracted
True
elevation
93
env package
host-associated
etiology
infectious
experiment_design_description
Zebrafish
host common name
human
host subject id
H026
individual
H026
latitude
34.05
longitude
-118.25
luminal_status
small intestine unfed
mastermix_id
14509333
observed_species_mean
294.0
observed_species_med
293.0
observed_species_stdv
4.027681991
orig name
FE.2
pd_whole_tree_mean
14.495994
pd_whole_tree_med
14.603475
pd_whole_tree_stdv
0.32481724
physical_specimen_location
UCSDMI
physical_specimen_remaining
False
primer_date
22114
primer_plate
7
processing_robot
ROBE
project name
CHLA
sample center
CHLA
sample name
qiita_sid_10512:10512.FE.2
sample type
ileum hartmann
sample_name_old
52b
sample_plate
CHLA_Plate3
sex
male
shannon_mean
5.496618197
shannon_med
5.492583716
shannon_stdv
0.02536727