mouse gut metagenome day 0 of antibiotic treatment initiation
mouse gut metagenome
Mouse 2, Day 0
collection_date
2011-11-23
env_biome
mouse gut
env_feature
feces
env_material
stool pellets
geo_loc_name
Singapore
host
Mus musculus
lat_lon
1.3 N 103.8 E
chem_administration
none
host_age
6-8 weeks
host_body_habitat
rectum
host_body_product
stool
host_diet
Harlan 2018 Teklad Global 18% Protein Rodent Diet
host_genotype
C57BL/6J
host_sex
female
host_subject_id
Mouse 2
host_taxid
10090
host_tissue_sampled
feces
perturbation
none
samp_mat_process
phenol/chloroform extraction
samp_size
512.8 mg
samp_store_dur
3 months
samp_store_temp
-80 Â°C
samp_vol_we_dna_ext
50 mg
source_material_id
D0009
sequencing_library_ID
DMS008
spike_in
2x10^5 C. albicans cells + 2x10^5 S. cerevisiae
BioSampleModel
Metagenome or environmental