10512.FN
human gut metagenome
colostomy
ENA first public
2016-06-01
ENA last update
2016-05-27
External Id
SAMEA4016069
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-06-01T17:01:04Z
INSDC last update
2016-05-27T23:02:12Z
INSDC status
public
Submitter Id
qiita_sid_10512:10512.FN
age
7
age cat
under 3
age unit
months
anonymized name
FN
body habitat
UBERON:colon
breastmilk
1
chao1_mean
368.7028063
chao1_med
382.1279762
chao1_stdv
51.65941263
colitis_atresia
Colon Atresia
collection_timestamp
11/20/13
diagnosis
Imperforate anus (interval stoma takedown)
diagnosis_simple
atresia
diet
fed
dna_extracted
True
elevation
93
env package
host-associated
etiology
obstructive
experiment_design_description
Zebrafish
host common name
human
host subject id
H034
individual
H034
latitude
34.05
longitude
-118.25
luminal_status
colon fed
mastermix_id
14509333
observed_species_mean
161.6
observed_species_med
162.0
observed_species_stdv
8.030497425
orig name
FN
pd_whole_tree_mean
11.98417
pd_whole_tree_med
11.892095
pd_whole_tree_stdv
0.421279487
physical_specimen_location
UCSDMI
physical_specimen_remaining
False
primer_date
22114
primer_plate
6
processing_robot
JERE
project name
CHLA
sample center
CHLA
sample name
qiita_sid_10512:10512.FN
sample type
colostomy
sample_name_old
69a
sample_plate
CHLA_Plate2
sex
male
shannon_mean
4.923325037
shannon_med
4.914435577
shannon_stdv
0.035607466