10512.ER
human gut metagenome
colostomy
ENA first public
2016-06-01
ENA last update
2016-05-27
External Id
SAMEA4016056
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-06-01T17:01:04Z
INSDC last update
2016-05-27T23:02:12Z
INSDC status
public
Submitter Id
qiita_sid_10512:10512.ER
age
9
age cat
under 3
age unit
months
anonymized name
ER
body habitat
UBERON:colon
breastmilk
1
chao1_mean
394.9322751
chao1_med
405.2337662
chao1_stdv
59.04293853
colitis_atresia
Colon Atresia
collection_timestamp
5/8/13
diagnosis
Imperforate anus (interval stoma takedown)
diagnosis_simple
atresia
diet
fed
dna_extracted
True
elevation
93
env package
host-associated
etiology
obstructive
experiment_design_description
Zebrafish
host common name
human
host subject id
H017
individual
H017
latitude
34.05
longitude
-118.25
luminal_status
colon fed
mastermix_id
14509333
observed_species_mean
153.6
observed_species_med
154.0
observed_species_stdv
3.565264522
orig name
ER
pd_whole_tree_mean
8.862175
pd_whole_tree_med
8.88867
pd_whole_tree_stdv
0.295989886
physical_specimen_location
UCSDMI
physical_specimen_remaining
False
primer_date
22114
primer_plate
6
processing_robot
JERE
project name
CHLA
sample center
CHLA
sample name
qiita_sid_10512:10512.ER
sample type
colostomy
sample_name_old
37a
sample_plate
CHLA_Plate2
sex
female
shannon_mean
3.027141344
shannon_med
3.035225886
shannon_stdv
0.032089618