10512.FC
human gut metagenome
rectum
ENA first public
2016-06-01
ENA last update
2016-05-27
External Id
SAMEA4016063
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-06-01T17:01:04Z
INSDC last update
2016-05-27T23:02:12Z
INSDC status
public
Submitter Id
qiita_sid_10512:10512.FC
age
156
age cat
Three or older
age unit
months
anonymized name
FC
body habitat
UBERON:rectum
breastmilk
0
chao1_mean
335.0457416
chao1_med
334.1142857
chao1_stdv
20.31059785
colitis_atresia
Colon Colitis
collection_timestamp
8/13/13
diagnosis
Ulcerative colitis
diagnosis_simple
Ulcerative colitis
diet
unfed
dna_extracted
True
elevation
93
env package
host-associated
experiment_design_description
Zebrafish
host common name
human
host subject id
H025
individual
H025
latitude
34.05
longitude
-118.25
mastermix_id
14509333
observed_species_mean
210.7
observed_species_med
211.0
observed_species_stdv
3.368151488
orig name
FC
pd_whole_tree_mean
17.314941
pd_whole_tree_med
17.360515
pd_whole_tree_stdv
0.225594462
physical_specimen_location
UCSDMI
physical_specimen_remaining
False
pouch
Hartmann's
primer_date
22114
primer_plate
6
processing_robot
JERE
project name
CHLA
sample center
CHLA
sample name
qiita_sid_10512:10512.FC
sample type
rectum
sample_name_old
50b (same as pt 21)
sample_plate
CHLA_Plate2
sex
female
shannon_mean
5.109633577
shannon_med
5.108303186
shannon_stdv
0.015887439
source
zebrafish