10512.GB
human gut metagenome
colostomy
ENA first public
2016-06-01
ENA last update
2016-05-27
External Id
SAMEA4016075
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-06-01T17:01:04Z
INSDC last update
2016-05-27T23:02:12Z
INSDC status
public
Submitter Id
qiita_sid_10512:10512.GB
age
23
age cat
under 3
age unit
months
anonymized name
GB
body habitat
UBERON:colon
chao1_mean
363.9574368
chao1_med
365.6272727
chao1_stdv
64.89232775
collection_timestamp
9/4/13
diagnosis
Atresia (interval stoma revision)
diagnosis_simple
atresia
diet
fed
dna_extracted
True
elevation
93
env package
host-associated
etiology
obstructive
experiment_design_description
2 projects: mouse experimental regeneration of intestinal
host common name
human
host subject id
H031
individual
H031
latitude
34.05
longitude
-118.25
luminal_status
colon fed
mastermix_id
14509333
observed_species_mean
152.4
observed_species_med
155.5
observed_species_stdv
8.871928263
orig name
GB
pd_whole_tree_mean
11.497962
pd_whole_tree_med
11.47817
pd_whole_tree_stdv
0.732029146
physical_specimen_location
UCSDMI
physical_specimen_remaining
False
primer_date
22114
primer_plate
6
processing_robot
JERE
project name
CHLA
sample center
CHLA
sample name
qiita_sid_10512:10512.GB
sample type
colostomy
sample_name_old
56
sample_plate
CHLA_Plate2
sex
male
shannon_mean
3.23565039
shannon_med
3.229116153
shannon_stdv
0.042809033