10512.GQ
human gut metagenome
colostomy
ENA first public
2016-06-01
ENA last update
2016-05-27
External Id
SAMEA4016083
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-06-01T17:01:04Z
INSDC last update
2016-05-27T23:02:13Z
INSDC status
public
Submitter Id
qiita_sid_10512:10512.GQ
age
0
age cat
under 3
age unit
months
anonymized name
GQ
body habitat
UBERON:colon
breastmilk
1
chao1_mean
331.5461301
chao1_med
346.0542986
chao1_stdv
55.5921978
colitis_atresia
Colon Atresia
collection_timestamp
3/12/14
diagnosis
Imperforate anus (interval stoma takedown)
diagnosis_simple
atresia
diet
fed
dna_extracted
True
elevation
93
env package
host-associated
etiology
obstructive
experiment_design_description
2 projects: mouse experimental regeneration of intestinal
host common name
human
host subject id
H041
individual
H041
latitude
34.05
longitude
-118.25
luminal_status
colon fed
mastermix_id
14509333
observed_species_mean
145.9
observed_species_med
148.5
observed_species_stdv
9.677580046
orig name
GQ
pd_whole_tree_mean
8.471649
pd_whole_tree_med
8.374725
pd_whole_tree_stdv
0.473109377
physical_specimen_location
UCSDMI
physical_specimen_remaining
False
primer_date
22114
primer_plate
8
processing_robot
ROBE
project name
CHLA
sample center
CHLA
sample name
qiita_sid_10512:10512.GQ
sample type
colostomy
sample_plate
CHLA_Plate8
sex
female
shannon_mean
4.369229666
shannon_med
4.384282252
shannon_stdv
0.038535731