Reindeer_1_bin_90
uncultured bacterium
ENA-FIRST-PUBLIC
2020-11-10T04:11:19Z
ENA-LAST-UPDATE
2020-11-02T12:32:27Z
External Id
SAMEA7509320
INSDC center name
THE ROSLIN INSTITUTE
INSDC first public
2020-11-10T04:11:19Z
INSDC last update
2020-11-02T12:32:27Z
INSDC status
public
Submitter Id
Reindeer_1_bin_90
assembly software
IDBA-UD
binning parameters
-v -m 2000
binning software
Metabat2
collection date
not collected
common name
uncultured bacterium
completeness score
66.55
completeness software
CheckM
contamination score
52.62
environment (biome)
Rangifer tarandus
environment (feature)
Rumen
environment (material)
Rumen contents
geographic location (country and/or sea)
Finland
geographic location (latitude)
67.9222
geographic location (longitude)
26.5046
investigation type
metagenome
isolation source
metagenome
metagenomic source
Rangifer tarandus
project name
PRJEB34458
sample derived from
ERS3750160
sample name
Reindeer_1_bin_90
scientific_name
uncultured bacterium
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
CheckM_markers