T1E
soil metagenome
ENA first public
2019-07-29
ENA last update
2017-07-31
External Id
SAMEA104188002
INSDC center alias
INRA-CMSE
INSDC center name
UMR Agroecology, INRA - Burgundy University, Dijon, France
INSDC first public
2019-07-29T11:32:27Z
INSDC last update
2017-07-31T09:35:39Z
INSDC status
public
Submitter Id
VITIF_2016_P1_T1_E_H1_16S
collection date
2016-05-25
current land use
vineyard
environment (biome)
terrestrial biome
environment (feature)
anthropogenic geographic feature
environment (material)
soil
geographic location (altitude)
77
geographic location (country and/or sea)
France
geographic location (depth)
0,2
geographic location (elevation)
77
geographic location (latitude)
45,085759
geographic location (longitude)
-0,2917797
investigation type
metagenome
nucleic acid extraction
DNA was extracted using GnS-GII protocol as described in Terrat et al , 2012
ph
6,49
project name
VitiForest
sample name
VITIF_2016_P1_T1_E_H1_16S
sample weight for DNA extraction
1
sequencing method
Illumina-MiSeq
soil environmental package
soil
texture
48,8/36,7/14,5
total organic carbon
9,81