American Gut Project; 10317.000079390
human gut metagenome
ENA first public
2018-02-15
ENA last update
2018-02-14
External Id
SAMEA104592022
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2018-02-15T17:08:36Z
INSDC last update
2018-02-14T18:27:59Z
INSDC status
public
Submitter Id
qiita_sid_10317:10317.000079390
acid_reflux
Unspecified
acne medication
false
acne_medication_otc
false
add_adhd
Unspecified
age cat
70+
age years
76
age_corrected
76.0
alcohol consumption
true
alcohol_frequency
Occasionally (1-2 times/week)
alcohol_types
Unspecified
alcohol_types_beercider
No
alcohol_types_red_wine
false
alcohol_types_sour_beers
false
alcohol_types_spiritshard_alcohol
false
alcohol_types_unspecified
true
alcohol_types_white_wine
false
allergic to i have no food allergies that i know of
false
allergic_to
Unspecified
allergic_to_other
false
allergic_to_peanuts
false
allergic_to_shellfish
false
allergic_to_tree_nuts
false
allergic_to_unspecified
true
alzheimers
Unspecified
anonymized name
000079390
antibiotic_history
I have not taken antibiotics in the past year.
appendix_removed
false
artificial_sweeteners
Unspecified
asd
Unspecified
assigned_from_geo
Yes
autoimmune
Unspecified
birth year
1941
bmi
25.86
bmi_cat
Overweight
bmi_corrected
25.86
body habitat
UBERON:feces
body product
UBERON:feces
body site
UBERON:feces
bowel_movement_frequency
Unspecified
bowel_movement_quality
Unspecified
breastmilk_formula_ensure
Unspecified
cancer
Unspecified
cancer treatment
Unspecified
cardiovascular_disease
Unspecified
cat
false
cdiff
Unspecified
census_region
West
chickenpox
Yes
clinical condition
Unspecified
collection date
11/08/2017
collection month
November
collection season
Fall
collection time
11:05
collection_timestamp
2017-11-08 11:05
consume_animal_products_abx
Unspecified
contraceptive
No
cosmetics_frequency
Never
country
USA
country of birth
United States
country_residence
Unspecified
csection
false
deodorant_use
I use deodorant
depression_bipolar_schizophrenia
Unspecified
diabetes
I do not have this condition
diabetes type
Unspecified
diet type
Omnivore
dna_extracted
true
dog
false
dominant hand
I am right handed
drinking_water_source
City
drinks_per_session
Unspecified
economic_region
Rocky Mountain
elevation
1028.4
env biome
dense settlement biome
env feature
human-associated habitat
env package
human-gut
env_material
feces
epilepsy_or_seizure_disorder
Unspecified
exercise_frequency
Regularly (3-5 times/week)
exercise_location
Indoors
fed_as_infant
Unspecified
fermented_plant_frequency
Unspecified
flossing_frequency
Never
flu_vaccine_date
I have not gotten the flu vaccine in the past year.
frozen_dessert_frequency
Unspecified
fruit_frequency
Unspecified
fungal_overgrowth
Unspecified
geo loc name
USA:MT
gluten
Unspecified
height cm
168
height_units
centimeters
high_fat_red_meat_frequency
Unspecified
homecooked_meals_frequency
Unspecified
host common name
human
host subject id
2cfc76976ac92ce106cbf8455aa333b10606f1418eb970a12b9c9b717c2d0b0c04a7c574b68c13b097be6c74f38642c7e1a4ca0a7f75225c8f65868aa7774e4d
host taxid
9606
ibd
I do not have this condition
ibd diagnosis
Unspecified
ibd_diagnosis_refined
Unspecified
ibs
Unspecified
kidney_disease
Unspecified
lactose
No
last_move
Unspecified
last_travel
I have not been outside of my country of residence in the past year.
latitude
47.5
level_of_education
Unspecified
liver_disease
Unspecified
livingwith
No
longitude
-111.2
lowgrain_diet_type
Unspecified
lung disease
I do not have this condition
meat_eggs_frequency
Unspecified
mental_illness
Unspecified
mental_illness_type
Unspecified
mental_illness_type_anorexia_nervosa
Unspecified
mental_illness_type_bipolar_disorder
Unspecified
mental_illness_type_bulimia_nervosa
Unspecified
mental_illness_type_depression
Unspecified
mental_illness_type_ptsd_posttraumatic_stress_disorder
Unspecified
mental_illness_type_schizophrenia
Unspecified
mental_illness_type_substance_abuse
Unspecified
mental_illness_type_unspecified
Unspecified
migraine
I do not have this condition
milk_cheese_frequency
Unspecified
milk_substitute_frequency
Unspecified
multivitamin
Yes
nail_biter
No
non_food_allergies
Unspecified
non_food_allergies_beestings
No
non_food_allergies_drug_eg_penicillin
No
non_food_allergies_pet_dander
No
non_food_allergies_poison_ivyoak
No
non_food_allergies_sun
No
non_food_allergies_unspecified
Yes
olive_oil
Unspecified
one_liter_of_water_a_day_frequency
Unspecified
other_supplement_frequency
Yes
pets_other
Unspecified
physical_specimen_location
UCSDMI
physical_specimen_remaining
Yes
pku
I do not have this condition
pool_frequency
Never
poultry_frequency
Unspecified
pregnant
No
prepared_meals_frequency
Unspecified
probiotic_frequency
Unspecified
public
Yes
race
Caucasian
ready_to_eat_meals_frequency
Unspecified
red_meat_frequency
Unspecified
roommates
Unspecified
roommates_in_study
Unspecified
salted_snacks_frequency
Unspecified
sample name
qiita_sid_10317:10317.000079390
sample type
Stool
seafood_frequency
Unspecified
seasonal_allergies
Unspecified
sex
female
sibo
Unspecified
skin_condition
I do not have this condition
sleep_duration
7-8 hours
smoking_frequency
Never
softener
No
specialized_diet
Unspecified
specialized_diet_exclude_dairy
Unspecified
specialized_diet_exclude_nightshades
Unspecified
specialized_diet_exclude_refined_sugars
Unspecified
specialized_diet_fodmap
Unspecified
specialized_diet_halaal
Unspecified
specialized_diet_i_do_not_eat_a_specialized_diet
Unspecified
specialized_diet_kosher
Unspecified
specialized_diet_modified_paleo_diet
Unspecified
specialized_diet_other_restrictions_not_described_here
Unspecified
specialized_diet_paleodiet_or_primal_diet
Unspecified
specialized_diet_raw_food_diet
Unspecified
specialized_diet_unspecified
Unspecified
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo
Unspecified
state
MT
subset_age
False
subset_antibiotic_history
True
subset_bmi
True
subset_diabetes
True
subset_healthy
False
subset_ibd
True
sugar_sweetened_drink_frequency
Unspecified
sugary_sweets_frequency
Unspecified
survey_id
6e337b98a0a0c71c
teethbrushing_frequency
Daily
thyroid
Unspecified
tonsils_removed
Yes
types_of_plants
More than 30
vegetable_frequency
Unspecified
vitamin_b_supplement_frequency
Unspecified
vitamin_d_supplement_frequency
Unspecified
vivid_dreams
Unspecified
weight kg
73
weight_change
Remained stable
weight_units
kilograms
whole_eggs
Unspecified
whole_grain_frequency
Unspecified