Tomato-pathgoen interaction RNA-seq
Solanum lycopersicum
ENA first public
2017-07-24
ENA last update
2017-06-08
External Id
SAMEA104118693
INSDC center alias
Zurich University of Applied Sciences
INSDC center name
Zurich University of Applied Sciences
INSDC first public
2017-07-24T17:01:42Z
INSDC last update
2017-06-08T21:20:28Z
INSDC status
public
Submitter Id
30
amount or size of sample collected
0.4
collection date
2015-16
common name
tomato
environment (material)
Tomato leaves
geographic location (country and/or sea)
Switzerland
geographic location (latitude)
47° 13' 4“ N
geographic location (longitude)
8° 40' 44“
host age
2
host common name
Tomato
host disease status
artificially drop inoculated with spore and corresponding mock solution
host taxid
4081
investigation type
metatranscriptome
pathogene
Phytophthora infestans (PI), Botrytis cinerea (BC), Oidium neolycopersici (ON)
plant body site
leaf
plant-associated environmental package
plant-associated
project name
Transcriptome of Solanum lycopersicum
sample name
30
sample storage temperature
-80
sequencing method
Illumina HiSeq
temperature
16-22