P6071_517_bin253
uncultured prokaryote
Belongs to Baltic Sea cluster BACL31
ENA-FIRST-PUBLIC
2020-01-31T08:04:38Z
ENA-LAST-UPDATE
2020-01-16T16:03:01Z
External Id
SAMEA6483976
INSDC center name
KTH
INSDC first public
2020-01-31T08:04:38Z
INSDC last update
2020-01-16T16:03:01Z
INSDC status
public
Submitter Id
P6071_517_bin253
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
Megahit;1.1.2;with the --meta-sensitive option
binning parameters
Concoct parameters: -c 400 -l 1000 -t 16 -s 1 using Kallisto version 0.43.0 for coverate estimation.
binning software
concoct
collection date
2015-08-24
completeness score
92.83
completeness software
checkm
contamination score
2.6
environment (biome)
Brackish water
environment (feature)
coastal
environment (material)
water
geographic location (country and/or sea)
Baltic Sea
geographic location (latitude)
57.6815
geographic location (longitude)
24.263
investigation type
metagenome
isolation source
water
metagenomic source
aquatic metagenome
project name
A comprehensive catalogue of Baltic Sea metagenome-assembled genomes
sample derived from
ERS4036387
sample name
P6071_517_bin253
scientific_name
uncultured prokaryote
sequencing method
Illumina HiSeq