Solibacillus cecembensis
isolation_source
marine sediment
collection_date
Not applicable
geo_loc_name
North Sea: German Bight (Helgoland Mud Area)
lat_lon
54.052300 N 7.580400 E
rel_to_oxygen
obligate anaerobe
samp_mat_process
Enrichment was prepared using 5 mL volume from 4th transfer as starting material in a final volume of 50 mL widdel medium. Sample name identifies the unique information of each sample including the target 16S rRNA gene and the phase of the enrichment transfer.
samp_size
5 mL enrichment was centrifuged down to 1 mL volume which was used for DNA extraction
source_material_id
Benzoate + Lepidocrocite enrichment at 30ºC after the fifth transfer completely metabolised benzoate coupled to lepidocrocite reduction. 5mL was collected from the enrichment bottle and stored at -20ºC prior to DNA extraction and metagenome sequencing. Pooled DNA from three replicates of the BL5 enrichment used for metagenome sequencing. BL5_bin.10 is the reassembled metagenome assembled genome
isolate
BL5_bin.10
metagenomic
1
environmental-sample
1
sample-type
metagenomic assembly
metagenome-source
marine sediment metagenome
env_broad_scale
missing
env_local_scale
missing
env_medium
missing
derived-from
This BioSample is a metagenomic assembly obtained from the marine sediment metagenome BioSamples: SAMN14820614, SAMN14820615, and SAMN14820616
BioSampleModel
MIMAG