fish gut metagenome
Short bowel syndrome D, Middle control bowel, separate group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555908
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBSDMS
anonymized name
DY
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
proximal
chao1_mean
262.0178348
chao1_med
255.1578947
chao1_stdv
41.64049252
collection_timestamp
11/06/2013
diagnosis
short bowel
diet
control
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
organic material
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
Z035
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
118.3
observed_species_med
118.5
observed_species_stdv
6.700746227
pd_whole_tree_mean
7.248035
pd_whole_tree_med
7.23476
pd_whole_tree_stdv
0.630444697
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBSDMS
sample type
fish gut mucosa
sex
Missing: Not provided
shannon_mean
2.83318992
shannon_med
2.844594993
shannon_stdv
0.058153691
tank
T018
tank_type
separate