fish gut metagenome
Short bowel syndrome #3 Proximal bowel, separate group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555889
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBS3PS
anonymized name
BW
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
sham
chao1_mean
403.7360177
chao1_med
399.3089245
chao1_stdv
50.20111807
collection_timestamp
11/06/2013
diagnosis
short bowel
diet
fed
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
organic material
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
Z0016
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
175.4
observed_species_med
174.5
observed_species_stdv
7.919034734
pd_whole_tree_mean
11.046154
pd_whole_tree_med
11.096985
pd_whole_tree_stdv
0.485307637
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBS3PS
sample type
fish gut mucosa
sex
Missing: Not provided
shannon_mean
3.646675736
shannon_med
3.638580986
shannon_stdv
0.053125303
tank
T004
tank_type
separate