fish gut metagenome
Short bowel syndrome #2 Distal bowel, separate group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555881
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBS2DS
anonymized name
BU
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
control
chao1_mean
640.9765199
chao1_med
618.2372414
chao1_stdv
89.35365554
collection_timestamp
11/06/2013
diagnosis
short bowel
diet
unfed
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
organic material
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
Z0015
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
230.2
observed_species_med
231.5
observed_species_stdv
9.223159256
pd_whole_tree_mean
8.055735
pd_whole_tree_med
7.95611
pd_whole_tree_stdv
0.919126662
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBS2DS
sample type
fish gut mucosa
sex
Missing: Not provided
shannon_mean
4.735375612
shannon_med
4.73633131
shannon_stdv
0.028020584
tank
T003
tank_type
separate