fish gut metagenome
Short bowel syndrome #5 Distal bowel, separate group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555896
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBS5DS
anonymized name
CG
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
control
chao1_mean
400.8447964
chao1_med
393.1576087
chao1_stdv
99.83590702
collection_timestamp
11/06/2013
diagnosis
short bowel
diet
unfed
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
organic material
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
Z0018
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
157.5
observed_species_med
157
observed_species_stdv
5.930148958
pd_whole_tree_mean
10.61813
pd_whole_tree_med
10.683245
pd_whole_tree_stdv
0.490725008
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBS5DS
sample type
fish gut mucosa
sex
Missing: Not provided
shannon_mean
4.099765728
shannon_med
4.104746136
shannon_stdv
0.031007714
tank
T006
tank_type
separate