fish gut metagenome
Short bowel syndrome E, Distal bowel, together group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555912
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBSEDT
anonymized name
DO
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
control
chao1_mean
209.420363
chao1_med
190.6212121
chao1_stdv
54.39033248
collection_timestamp
11/06/2013
diagnosis
short bowel
diet
unfed
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
organic material
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
Z032
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
77.7
observed_species_med
79
observed_species_stdv
4.001388648
pd_whole_tree_mean
5.8405
pd_whole_tree_med
5.79411
pd_whole_tree_stdv
0.378792296
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBSEDT
sample type
fish gut mucosa
sex
Missing: Not provided
shannon_mean
1.053478753
shannon_med
1.047365977
shannon_stdv
0.044800397
tank
T016
tank_type
shared