fish gut metagenome
Short bowel syndrome B, Middle control bowel, together group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555903
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBSBMT.a
anonymized name
DE
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
distal
chao1_mean
346.5823524
chao1_med
347.2587418
chao1_stdv
2.795736672
collection_timestamp
11/06/2013
diagnosis
short bowel
diet
control
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
organic material
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
Z029
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
314.9
observed_species_med
315
observed_species_stdv
0.875595036
pd_whole_tree_mean
7.558425
pd_whole_tree_med
7.56602
pd_whole_tree_stdv
0.018285882
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBSBMT.a
sample type
fish gut mucosa
sex
Missing: Not provided
shannon_mean
4.708883712
shannon_med
4.708008207
shannon_stdv
0.009759144
tank
T016
tank_type
shared