freshwater metagenome
Short bowel syndrome #5 Tank water, separate group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555897
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBS5TWS
anonymized name
CH.2
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
water
chao1_mean
552.2569964
chao1_med
530.234127
chao1_stdv
71.98743485
collection_timestamp
11/15/2013
diagnosis
short bowel
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
water
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
W006
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
272.7
observed_species_med
275
observed_species_stdv
7.484057129
pd_whole_tree_mean
13.136399
pd_whole_tree_med
12.984735
pd_whole_tree_stdv
0.77347564
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBS5TWS
sample type
freshwater
sex
Missing: Not provided
shannon_mean
4.775225162
shannon_med
4.773167985
shannon_stdv
0.039852065
tank
T006
tank_type
separate