fish gut metagenome
Short bowel syndrome C, Middle control bowel, together group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555906
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBSCMT.b
anonymized name
DH.2
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
proximal
chao1_mean
708.3988928
chao1_med
705.3666667
chao1_stdv
145.1013464
collection_timestamp
11/06/2013
diagnosis
short bowel
diet
control
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
organic material
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
Z030
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
203.1
observed_species_med
206.5
observed_species_stdv
10.24640858
pd_whole_tree_mean
7.882763
pd_whole_tree_med
7.894445
pd_whole_tree_stdv
0.800354525
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBSCMT.b
sample type
fish gut mucosa
sex
Missing: Not provided
shannon_mean
3.588825287
shannon_med
3.586593695
shannon_stdv
0.058496432
tank
T016
tank_type
shared