fish gut metagenome
Short bowel syndrome F, Proximal bowel, together group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555915
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBSFPT
anonymized name
DP
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
water
chao1_mean
537.9722927
chao1_med
546.1875
chao1_stdv
96.44438369
collection_timestamp
11/06/2013
diagnosis
short bowel
diet
fed
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
organic material
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
Z033
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
200
observed_species_med
202
observed_species_stdv
8.768630959
pd_whole_tree_mean
8.915417
pd_whole_tree_med
8.801685
pd_whole_tree_stdv
0.359934503
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBSFPT
sample type
fish gut mucosa
sex
Missing: Not provided
shannon_mean
4.096838267
shannon_med
4.101886897
shannon_stdv
0.050634417
tank
T016
tank_type
shared