fish gut metagenome
Short bowel syndrome F, Middle control bowel, together group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555914
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBSFMT
anonymized name
DQ
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
proximal
chao1_mean
259.6631599
chao1_med
245.53125
chao1_stdv
37.93186339
collection_timestamp
11/06/2013
diagnosis
short bowel
diet
control
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
organic material
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
Z033
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
122.9
observed_species_med
125
observed_species_stdv
6.081849134
pd_whole_tree_mean
7.998584
pd_whole_tree_med
8.0184
pd_whole_tree_stdv
0.554202254
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBSFMT
sample type
fish gut mucosa
sex
Missing: Not provided
shannon_mean
3.120627756
shannon_med
3.141055184
shannon_stdv
0.043001564
tank
T016
tank_type
shared