human nasopharyngeal metagenome
DNA conc
Not collected
ENA-FIRST-PUBLIC
2020-10-21T08:08:42Z
ENA-LAST-UPDATE
2020-10-20T23:34:56Z
External Id
SAMEA7468805
INSDC center name
UCSDMI
INSDC first public
2020-10-21T08:08:42Z
INSDC last update
2020-10-20T23:34:56Z
INSDC status
public
Submitter Id
qiita_sid_12201:12201.skin.nares.T.2.microbiome20.C
bead_beating
20 min. at 30 Hz
biomass_plate
COVID-19
biomass_sample
low
collection_timestamp
2020-05-13
dna_extracted
TRUE
elevation
193
empo_1
Host-asssociated
empo_2
Animal-associated
empo_3
Animal secretion
env biome
urban biome
env feature
human-associated habitat
env package
human-skin
env_material
mucus
extraction_kit
MagMAX Microbiome
extraction_kit_id
microbiome
extraction_vendor
Thermo
fresh_frozen
frozen one day at -80C
gdna_well_id
F2
geo loc name
USA:CA,San Diego
host age
Not collected
host body habitat
UBERON:skin
host body mass index
Not collected
host body product
UBERON:sebum
host body site
UBERON: external naris
host common name
human
host height
Not collected
host life stage
adult
host scientific name
Homo sapiens
host subject id
human.T
host taxid
9606
host weight
Not collected
host_age_units
Not collected
host_height_units
cm
host_weight_units
kg
incubation
10 min. at 65 degrees C
index
782
latitude
32.5
longitude
-117.25
ng_ul
Not collected
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
qc_16s_concentration
Not collected
qc_230
Not collected
qc_260
Not collected
qc_260_230
Not collected
qc_260_280
Not collected
qc_280
Not collected
qc_blank_230
Not collected
qc_blank_260
Not collected
qc_blank_280
Not collected
qc_blank_320
Not collected
qc_raw_230
Not collected
qc_raw_260
Not collected
qc_raw_280
Not collected
qc_raw_320
Not collected
round
3
sample name
qiita_sid_12201:12201.skin.nares.T.2.microbiome20.C
sample type
nasal swab
sample_technical_replicate
2
sample_type_1
human
sample_type_2
human nares
sample_type_3
human nares T
scientific_name
human nasopharyngeal metagenome
sex
male
storage_solution
95% ethanol
swab_type
CDC PE