fish gut metagenome
Short bowel syndrome #1 Proximal bowel, separate group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555879
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBS1PS
anonymized name
BO
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
sham
chao1_mean
482.48599
chao1_med
473.7908333
chao1_stdv
132.999103
collection_timestamp
11/06/2013
diagnosis
short bowel
diet
fed
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
organic material
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
Z0014
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
170.5
observed_species_med
170.5
observed_species_stdv
6.433419689
pd_whole_tree_mean
8.273772
pd_whole_tree_med
8.237655
pd_whole_tree_stdv
0.40745789
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBS1PS
sample type
fish gut mucosa
sex
Missing: Not provided
shannon_mean
3.197669048
shannon_med
3.197651447
shannon_stdv
0.026126705
tank
T002
tank_type
separate