fish gut metagenome
Sham #1 bowel, together group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555916
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.Sham1T
anonymized name
BD
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
distal
chao1_mean
349.001143
chao1_med
305.6345029
chao1_stdv
136.521982
collection_timestamp
11/15/2013
diagnosis
sham
diet
fed
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
organic material
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
Z0005
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
108.7
observed_species_med
112
observed_species_stdv
9.006787564
pd_whole_tree_mean
7.0563
pd_whole_tree_med
7.09261
pd_whole_tree_stdv
0.494664715
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.Sham1T
sample type
fish gut mucosa
sex
Missing: Not provided
shannon_mean
2.029685459
shannon_med
2.027879423
shannon_stdv
0.055636805
tank
T020
tank_type
shared