fish gut metagenome
Short bowel syndrome #3 Distal bowel, separate group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555885
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBS3DS
anonymized name
BY.2
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
control
chao1_mean
333.0640079
chao1_med
343.4083333
chao1_stdv
40.98522427
collection_timestamp
11/06/2013
diagnosis
short bowel
diet
unfed
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
organic material
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
Z0016
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
157.8
observed_species_med
157.5
observed_species_stdv
5.865151319
pd_whole_tree_mean
10.286626
pd_whole_tree_med
10.30915
pd_whole_tree_stdv
0.26559845
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBS3DS
sample type
fish gut mucosa
sex
Missing: Not provided
shannon_mean
2.855825761
shannon_med
2.850554314
shannon_stdv
0.03271743
tank
T004
tank_type
separate