fish gut metagenome
Short bowel syndrome A, Middle control bowel, separate group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555899
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBSAMS
anonymized name
DU
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
proximal
chao1_mean
445.3891311
chao1_med
424.1875
chao1_stdv
72.7689069
collection_timestamp
11/06/2013
diagnosis
short bowel
diet
control
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
organic material
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
Z034
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
151.9
observed_species_med
150.5
observed_species_stdv
6.573515887
pd_whole_tree_mean
7.274907
pd_whole_tree_med
7.23541
pd_whole_tree_stdv
0.440800317
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBSAMS
sample type
fish gut mucosa
sex
Missing: Not provided
shannon_mean
1.553201152
shannon_med
1.546912309
shannon_stdv
0.041025913
tank
T017
tank_type
separate