freshwater metagenome
Short bowel syndrome #2 Tank water, separate group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555884
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBS2TWS
anonymized name
BV
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
proximal
chao1_mean
471.8981512
chao1_med
472.1363636
chao1_stdv
61.80731029
collection_timestamp
11/15/2013
diagnosis
short bowel
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
water
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
W003
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
169.6
observed_species_med
167.5
observed_species_stdv
5.966573556
pd_whole_tree_mean
9.112299
pd_whole_tree_med
9.260775
pd_whole_tree_stdv
0.551074595
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBS2TWS
sample type
freshwater
sex
Missing: Not provided
shannon_mean
3.797885639
shannon_med
3.793733179
shannon_stdv
0.05077781
tank
T003
tank_type
separate