fish gut metagenome
Short bowel syndrome #2 Middle control bowel, separate group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555882
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBS2MS
anonymized name
BT
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
distal
chao1_mean
540.3909284
chao1_med
535.0440051
chao1_stdv
80.18025489
collection_timestamp
11/06/2013
diagnosis
short bowel
diet
control
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
organic material
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
Z0015
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
242.5
observed_species_med
241
observed_species_stdv
9.698224351
pd_whole_tree_mean
8.995418
pd_whole_tree_med
9.156165
pd_whole_tree_stdv
0.469019514
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBS2MS
sample type
fish gut mucosa
sex
Missing: Not provided
shannon_mean
4.013841587
shannon_med
4.033436901
shannon_stdv
0.043891425
tank
T003
tank_type
separate