freshwater metagenome
Together Tank Water 1-5 Short bowel syndrome, sham and control
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555920
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:33Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.TW1to5T
anonymized name
BN.2
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
proximal
chao1_mean
423.0381358
chao1_med
417.9076655
chao1_stdv
36.25553389
collection_timestamp
11/15/2013
diagnosis
mixed
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
water
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
W001
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
222.3
observed_species_med
221
observed_species_stdv
4.922736366
pd_whole_tree_mean
10.632579
pd_whole_tree_med
10.8086
pd_whole_tree_stdv
0.689820477
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.TW1to5T
sample type
freshwater
sex
Missing: Not provided
shannon_mean
4.087109888
shannon_med
4.081043321
shannon_stdv
0.02600718
tank
T020
tank_type
shared