fish gut metagenome
Short bowel syndrome #2 Proximal bowel, together group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555883
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBS2PT
anonymized name
AU
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
proximal
chao1_mean
623.3185562
chao1_med
574.6456044
chao1_stdv
205.7314925
collection_timestamp
11/06/2013
diagnosis
short bowel
diet
fed
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
organic material
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
Z0002
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
148.2
observed_species_med
147
observed_species_stdv
6.373556481
pd_whole_tree_mean
5.831644
pd_whole_tree_med
5.831365
pd_whole_tree_stdv
0.529507142
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBS2PT
sample type
fish gut mucosa
sex
Missing: Not provided
shannon_mean
2.87588032
shannon_med
2.879261266
shannon_stdv
0.051677042
tank
T001
tank_type
shared