freshwater metagenome
Short bowel syndrome A-F Tank water, together group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555902
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBSAthruFTWT.a
anonymized name
DS
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
water
chao1_mean
767.9346744
chao1_med
768.1866278
chao1_stdv
2.883748524
collection_timestamp
11/15/2013
diagnosis
short bowel
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
water
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
W015
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
750.5
observed_species_med
751
observed_species_stdv
1.354006401
pd_whole_tree_mean
12.613087
pd_whole_tree_med
12.656305
pd_whole_tree_stdv
0.110371984
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBSAthruFTWT.a
sample type
freshwater
sex
Missing: Not provided
shannon_mean
8.692537872
shannon_med
8.69298084
shannon_stdv
0.009366709
tank
T016
tank_type
shared