human nasopharyngeal metagenome
DNA conc
Not collected
ENA-FIRST-PUBLIC
2020-10-21T08:08:42Z
ENA-LAST-UPDATE
2020-10-20T23:34:55Z
External Id
SAMEA7468790
INSDC center name
UCSDMI
INSDC first public
2020-10-21T08:08:42Z
INSDC last update
2020-10-20T23:34:55Z
INSDC status
public
Submitter Id
qiita_sid_12201:12201.skin.nares.D.3.2.qiagen.C
bead_beating
20 min. at 20 Hz
biomass_plate
COVID-19
biomass_sample
low
collection_timestamp
2020-05-13
dna_extracted
TRUE
elevation
193
empo_1
Host-asssociated
empo_2
Animal-associated
empo_3
Animal secretion
env biome
urban biome
env feature
human-associated habitat
env package
human-skin
env_material
mucus
extraction_kit
PowerSoil
extraction_kit_id
standard
extraction_vendor
Qiagen
fresh_frozen
frozen one day at -80C
gdna_well_id
F1
geo loc name
USA:CA,San Diego
host age
33
host body habitat
UBERON:skin
host body mass index
19.8
host body product
UBERON:sebum
host body site
UBERON: external naris
host common name
human
host height
168
host life stage
adult
host scientific name
Homo sapiens
host subject id
human.D
host taxid
9606
host weight
56
host_age_units
years
host_height_units
cm
host_weight_units
kg
incubation
10 min. at 65 degrees C
index
582
latitude
32.5
longitude
-117.25
ng_ul
Not collected
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
qc_16s_concentration
Not collected
qc_230
Not collected
qc_260
Not collected
qc_260_230
Not collected
qc_260_280
Not collected
qc_280
Not collected
qc_blank_230
Not collected
qc_blank_260
Not collected
qc_blank_280
Not collected
qc_blank_320
Not collected
qc_raw_230
Not collected
qc_raw_260
Not collected
qc_raw_280
Not collected
qc_raw_320
Not collected
round
3
sample name
qiita_sid_12201:12201.skin.nares.D.3.2.qiagen.C
sample type
nasal swab
sample_technical_replicate
2
sample_type_1
human
sample_type_2
human nares
sample_type_3
human nares D
scientific_name
human nasopharyngeal metagenome
sex
female
storage_solution
95% ethanol
swab_type
CDC PE