marine metagenome
This sample (TARA_N000001029) was collected during the Tara Oceans expedition (2009-2013) at station TARA_085 (latitudeN=-62.0385, longitudeE=-49.529) on date/time=2011-01-06T10:38, using a PUMP (High Volume Peristaltic Pump). The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 3-7 m, targeting a surface water layer (ENVO:00002042) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-5 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis. This sample has replicate sample(s): TARA_N000001028.
Chlorophyll Sensor
0.065273
Citation
tbd
ENA first public
2016-11-24
ENA last update
2015-11-04
Event Date/Time End
2011-01-06T12:30
External Id
SAMEA2621523
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2016-11-24T17:04:51Z
INSDC last update
2015-11-04T11:49:20Z
INSDC status
public
Latitude End
-62.1363
Longitude End
-49.3331
Salinity Sensor
34.35388
Submitter Id
TARA_N000001029
depth
5
environment (biome)
marine biome (ENVO:00000447)
environment (feature)
surface water layer (ENVO:00002042)
environment (material)
particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package
water
event date/time start
2011-01-06T10:38
event label
TARA_20110106T1038Z_085_EVENT_PUMP
further details
tbd
last update date
2014-05-01Z
latitude start
-62.0385
longitude start
-49.529
marine region
(search radius=5 degrees) Marine Province:Scotia Sea (MRGID:21742), Marine Ecoregion:South Orkney Islands (MRGID:21928)
nitrate sensor
27.501159
oxygen sensor
343.4373
project name
Tara Oceans expedition (2009-2013)
protocol label
PROT_NUC-RNA(100L)_W0.8-5
sample collection device
PUMP (High Volume Peristaltic Pump)
sample name
TARA_N000001029
sample status
This version can be used to provide data discovery services
sampling campaign
TARA_20101231Z
sampling platform
SV Tara
sampling station
TARA_085
size fraction lower threshold
0.8
size fraction upper threshold
5
temperature
0.67108