freshwater metagenome
Short bowel syndrome #4 Tank water, separate group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555895
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBS4TWS.a
anonymized name
CD
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
proximal
chao1_mean
1787.56398
chao1_med
1810.200549
chao1_stdv
91.84515688
collection_timestamp
11/15/2013
diagnosis
short bowel
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
water
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
W005
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
897.3
observed_species_med
892
observed_species_stdv
15.61374039
pd_whole_tree_mean
14.457181
pd_whole_tree_med
14.37505
pd_whole_tree_stdv
0.612009401
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBS4TWS.a
sample type
freshwater
sex
Missing: Not provided
shannon_mean
8.299474523
shannon_med
8.320986342
shannon_stdv
0.04164365
tank
T005
tank_type
separate