fish gut metagenome
Sham #4 Bowel, separate group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555918
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:33Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.Sham4BS
anonymized name
CM
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
proximal
chao1_mean
591.2607616
chao1_med
536.2053571
chao1_stdv
149.940957
collection_timestamp
11/15/2013
diagnosis
sham
diet
fed
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
organic material
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
Z0021
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
173
observed_species_med
175
observed_species_stdv
10.56198635
pd_whole_tree_mean
7.357035
pd_whole_tree_med
7.256315
pd_whole_tree_stdv
0.308409231
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.Sham4BS
sample type
fish gut mucosa
sex
Missing: Not provided
shannon_mean
3.744969849
shannon_med
3.726679504
shannon_stdv
0.071920785
tank
T009
tank_type
separate