human oral metagenome
DNA conc
Not collected
ENA-FIRST-PUBLIC
2020-10-21T08:08:42Z
ENA-LAST-UPDATE
2020-10-20T23:34:47Z
External Id
SAMEA7468662
INSDC center name
UCSDMI
INSDC first public
2020-10-21T08:08:42Z
INSDC last update
2020-10-20T23:34:47Z
INSDC status
public
Submitter Id
qiita_sid_12201:12201.oral.saliva.Q.1.microbiome2.C
bead_beating
2 min. at 30 Hz
biomass_plate
COVID-19
biomass_sample
high
collection_timestamp
2020-05-13
dna_extracted
TRUE
elevation
193
empo_1
Host-associated
empo_2
Animal-associated
empo_3
Animal secretion
env biome
urban biome
env feature
human-associated habitat
env package
human-oral
env_material
saliva
extraction_kit
MagMAX Microbiome
extraction_kit_id
microbiome
extraction_vendor
Thermo
fresh_frozen
frozen one day at -80C
gdna_well_id
F7
geo loc name
USA:CA,San Diego
host age
27
host body habitat
UBERON:saliva
host body mass index
Not collected
host body product
UBERON:saliva
host body site
UBERON:saliva
host common name
human
host height
Not collected
host life stage
adult
host scientific name
Homo sapiens
host subject id
human.Q
host taxid
9606
host weight
Not collected
host_age_units
years
host_height_units
cm
host_weight_units
kg
incubation
No incubation
index
726
latitude
32.5
longitude
-117.25
ng_ul
Not collected
physical_specimen_location
UCSDMI
physical_specimen_remaining
TRUE
qc_16s_concentration
Not collected
qc_230
Not collected
qc_260
Not collected
qc_260_230
Not collected
qc_260_280
Not collected
qc_280
Not collected
qc_blank_230
Not collected
qc_blank_260
Not collected
qc_blank_280
Not collected
qc_blank_320
Not collected
qc_raw_230
Not collected
qc_raw_260
Not collected
qc_raw_280
Not collected
qc_raw_320
Not collected
round
3
sample name
qiita_sid_12201:12201.oral.saliva.Q.1.microbiome2.C
sample type
saliva
sample_technical_replicate
1
sample_type_1
human
sample_type_2
human saliva
sample_type_3
human.saliva.Q
scientific_name
human oral metagenome
sex
female