freshwater metagenome
Short bowel syndrome E, Tank water, separate group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555913
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBSETWS
anonymized name
EE
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
middle
chao1_mean
507.6937036
chao1_med
483.709375
chao1_stdv
61.86931223
collection_timestamp
10/23/2013
diagnosis
short bowel
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
water
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
W018
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
237.4
observed_species_med
240
observed_species_stdv
9.570788891
pd_whole_tree_mean
11.619136
pd_whole_tree_med
11.41212
pd_whole_tree_stdv
0.520054059
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBSETWS
sample type
freshwater
sex
Missing: Not provided
shannon_mean
5.107010766
shannon_med
5.110989557
shannon_stdv
0.030018038
tank
T019
tank_type
separate