fish gut metagenome
Short bowel syndrome D, Proximal bowel, separate group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555909
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBSDPS
anonymized name
DX
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
water
chao1_mean
245.8684524
chao1_med
220.0625
chao1_stdv
110.5404517
collection_timestamp
11/06/2013
diagnosis
short bowel
diet
fed
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
organic material
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
Z035
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
65.6
observed_species_med
65
observed_species_stdv
6.221825384
pd_whole_tree_mean
4.975255
pd_whole_tree_med
4.97066
pd_whole_tree_stdv
0.646209803
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBSDPS
sample type
fish gut mucosa
sex
Missing: Not provided
shannon_mean
0.732773921
shannon_med
0.739804856
shannon_stdv
0.039264281
tank
T018
tank_type
separate