fish gut metagenome
Short bowel syndrome #4 Proximal bowel, together group
ENA first public
2016-11-23
ENA last update
2016-11-22
External Id
SAMEA4555894
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-11-23T17:01:56Z
INSDC last update
2016-11-22T17:58:32Z
INSDC status
public
Submitter Id
qiita_sid_10585:10585.SBS4PT
anonymized name
BA
body habitat
UBERON:gastro-intestinal system
body product
UBERON:intestinal mucosa
body site
UBERON:intestine
bowel
sham
chao1_mean
416.3142813
chao1_med
364.3671329
chao1_stdv
142.980466
collection_timestamp
11/06/2013
diagnosis
short bowel
diet
fed
dna_extracted
TRUE
elevation
93
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
organic material
geo loc name
USA:CA,Los Angeles
host common name
zebrafish
host scientific name
Danio rerio
host subject id
Z0004
host taxid
7955
latitude
34.05
longitude
-118.25
observed_species_mean
108.6
observed_species_med
107
observed_species_stdv
9.617114374
pd_whole_tree_mean
5.507191
pd_whole_tree_med
5.44388
pd_whole_tree_stdv
0.708105978
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
sample name
qiita_sid_10585:10585.SBS4PT
sample type
fish gut mucosa
sex
Missing: Not provided
shannon_mean
2.306594724
shannon_med
2.296071568
shannon_stdv
0.056533364
tank
T001
tank_type
shared