Cam2013_MVC05
human gut metagenome
Faecal metagenome of a 54 old male from Afan Essokié, Cameroon
ENA-FIRST-PUBLIC
2019-01-30T17:02:37Z
ENA-LAST-UPDATE
2018-06-08T18:10:53Z
External Id
SAMEA4719784
IHMC ethnicity
Bantu
INSDC center name
ALFRED WEGENER INSTITUTE FOR POLAR AND MARINE RESE
INSDC first public
2019-01-30T17:02:37Z
INSDC last update
2018-06-08T18:10:53Z
INSDC status
public
Submitter Id
MVC05
adapters
Read1: CTGTCTCTTATACACATCTCCGAGCCCACGAGACNNNNNNNNATCTCGTATGCCGTCTTCTGCTTG; Read2: CTGTCTCTTATACACATCTGACGCTGCCGACGANNNNNNNNGTGTAGATCTCGGTGGTCGCCGTATCATT
collection date
2013-10
common name
human gut metagenome
environment (biome)
human-associated habitat
environment (feature)
organic feature
environment (material)
feces
geographic location (country and/or sea)
Cameroon
geographic location (latitude)
2.3839521
geographic location (longitude)
9.9853964
geographic location (region and locality)
Cameroon: Afan Essokié
host age
54
host body mass index
23.64
host body product
feces
host diet
Farmer
host height
163
host sex
male
host subject id
MVC05
host total mass
62.8
human gut environmental package
human-gut
investigation type
metagenome
library construction method
Nextera XT
library reads sequenced
32916916
library screening strategy
random
multiplex identifiers
AGGCAGAA
nucleic acid extraction
http://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1005658
project name
ANR MICROREGAL
sample collection device or method
self-collection in plastic containers
sample material processing
ethanol preservation, freezing storage
sample name
MVC05
sample storage temperature
-80
sample volume or weight for DNA extraction
50
scientific_name
human gut metagenome
sequencing method
Illumina HiSeq