AMIGO-2018-CVT_2018-10-07Z_ST2_CT2_sediment-sampler-(multicorer-8-tubes-Oktopus)_sediment-layer-(10-15cm)-below-seabed_not-size-fractionated_eDNAB0002354
marine metagenome
sample description
This sample (eDNAB0002354) was collected at station ST2 during campaign AMIGO_2018_CVT, using a sediment-sampler-(multicorer-8-tubes-Oktopus). The sampling event occurred at position latitudeN=23.437 and longitudeE=-20.543, on date/time=2018-10-07Z, at a depth of 4101 m. The sample material was collected in the marine biome (ENVO:00000447) targeting a layer of marine sediment (ENVO:00002113), 10-15 cm below the seabed surface. The sample material was not-size-fractionated, packaged in a ziploc bag labelled AMIGO_2018_CVT_ST2_CT2_S_10-15, with no addition of chemical, stored freezer (-80degC), and sent to Ifremer, Sète, France. This sample may be used for metabarcoding analysis.
sampling campaign, label
AMIGO_2018_CVT
sampling campaign, plateform
RV Pourquoi pas ? (http://www.flotteoceanographique.fr/La-flotte/Navires/Navires-hauturiers/Pourquoi-pas)
sampling campaign, report
ARNAUD-HAOND Sophie, BONHOMME François (2018) AMIGO 2018 cruise, RV Pourquoi pas ?, https://doi.org/10.17600/18000439
sampling station, label
AMIGO-2018-CVT_ST2
sampling event, label
AMIGO-2018-CVT_2018-10-07Z_ST2_CT2_sediment-sampler-(multicorer-8-tubes-Oktopus)
sampling event, date-time, start
2018-10-07Z
sampling event, date/time, end
not-provided
sampling event, latitude, start
23.437
sampling event, latitude, end
not-provided
sampling event, longitude, start
-20.543
sampling event, longitude, end
not-provided
sampling event, elevation, depth below sea surface
4101
sampling event, device label
sediment-sampler-(multicorer-8-tubes-Oktopus)
sampling event, device collection area
79
environmental system, biome (ENVO:00000428)
marine benthic biome (ENVO:01000024)
environmental system, marine region
[NAO] North Atlantic Ocean (MRGID 1912)
environmental system, feature (ENVO:00002297)
abyssal plain (ENVO:00000244)
environmental condition, temperature
not-provided
environmental condition, salinity
not-provided
environmental condition, oxygen
not-provided
environmental condition, pH
not-provided
environmental material (ENVO:00010483)
marine sediment (ENVO:00002113)
environmental material, depth below sediment surface, top
10
environmental material, depth below sediment surface, bottom
15
environmental material, depth above sediment surface, top
not-available
environmental material, depth above sediment surface, bottom
not-available
environmental material, quantity, volume
0.395
environmental material, quantity, weight
not-provided
environmental material label
not-provided
sample protocol, label
SEQ-METAB_SED_<->
sample protocol, description
not-provided
sample protocol, target analysis
metabarcoding analysis
sample protocol, size fraction lower threshold
<
sample protocol, size fraction lower threshold, device
not-applicable
sample protocol, size fraction upper threshold
>
sample protocol, size fraction upper threshold, device
not-applicable
sample protocol, chemical treatment
no addition of chemical
sample protocol, temperature treatment
freezer (-80degC)
sample storage, container label
AMIGO_2018_CVT_ST2_CT2_S_10-15
sample storage, container type
ziploc bag
sample storage, location
Ifremer, Sète, France
collected_by
Ifremer, Sophie ARNAUD-HAOND (Sophie.Arnaud@ifremer.fr)
comment
not-provided
project name
eDNABYSS
funding acknowledgements
eDNABYSS has received funding from France Genomique (ANR-10-INBS-09) and Genoscope-CEA
funding acknowledgements
eDNABYSS has received funding from Ifremer through project Pourquoi pas les Abysses, as well as ship time and transit time from the French Fleet Commission.
funding acknowledgements
The curation of eDNABYSS provenance metadata was funded by the European Union's Horizon 2020 research and innovation programme under grant agreement No 678760 (ATLAS). This output reflects only the author's view and the European Union cannot be held responsible for any use that may be made of the information contained therein.
access and benefit sharing, sampled in Exclusive Economic Zone (EEZ)
not-provided
access and benefit sharing, relevant Nagoya protocol
not-provided
access and benefit sharing, agreements and permits
not-provided
broker name
Stephane PESANT
last update date
2019-07-01Z
checklist_accession
ERC000011
ENA-FIRST-PUBLIC
2019-08-05
ENA-LAST-UPDATE
2019-08-04