Cam2013_MVC06
human gut metagenome
Faecal metagenome of a 29 old male from Afan Essokié, Cameroon
ENA-FIRST-PUBLIC
2019-01-30T17:02:37Z
ENA-LAST-UPDATE
2018-06-08T18:10:53Z
External Id
SAMEA4719785
IHMC ethnicity
Bantu
INSDC center name
ALFRED WEGENER INSTITUTE FOR POLAR AND MARINE RESE
INSDC first public
2019-01-30T17:02:37Z
INSDC last update
2018-06-08T18:10:53Z
INSDC status
public
Submitter Id
MVC06
adapters
Read1: CTGTCTCTTATACACATCTCCGAGCCCACGAGACNNNNNNNNATCTCGTATGCCGTCTTCTGCTTG; Read2: CTGTCTCTTATACACATCTGACGCTGCCGACGANNNNNNNNGTGTAGATCTCGGTGGTCGCCGTATCATT
collection date
2013-10
common name
human gut metagenome
environment (biome)
human-associated habitat
environment (feature)
organic feature
environment (material)
feces
geographic location (country and/or sea)
Cameroon
geographic location (latitude)
2.3839521
geographic location (longitude)
9.9853964
geographic location (region and locality)
Cameroon: Afan Essokié
host age
29
host body mass index
21.39
host body product
feces
host diet
Farmer
host height
177
host sex
male
host subject id
MVC06
host total mass
67
human gut environmental package
human-gut
investigation type
metagenome
library construction method
Nextera XT
library reads sequenced
25611554
library screening strategy
random
multiplex identifiers
TCCTGAGC
nucleic acid extraction
http://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1005658
project name
ANR MICROREGAL
sample collection device or method
self-collection in plastic containers
sample material processing
ethanol preservation, freezing storage
sample name
MVC06
sample storage temperature
-80
sample volume or weight for DNA extraction
50
scientific_name
human gut metagenome
sequencing method
Illumina HiSeq