Synthetic Hot Lake microbial mock community
synthetic metagenome
An approximately equimolar mixture of 16S rRNA sequences cloned from Hot Lake mat samples using the 27F/1492R primers. Included sequences were identified as: ACL_P1A5 Phormidium; ACL_P1B5 Salinarimonas; HL7711_P1A3 Leptolyngbya; HL7711_P1B1 Thiohalocapsa; HL7711_P1B2 Desulfosalina; HL7711_P1D12 Nitriliruptor; HL7711_P1D2 Planctomycetes; HL7711_P2C1 Oceanicola; HL7711_P2F8 Clostridia; HL7711_P2H4 Chloroflexi; HL7711_P2H7 Rubrimonas; HL7711_P3D1 Pseudorugeria; HL7711_P3E8 Spirochaeta; HL7711_P3F6 Thialkalivibrio; HL7711_P4B1 Roseibacterium; HL7711_P4F7 Deinococcus; HL7711_P4G11 Verrucomicrobia; HL7711_P5A1 Geminicoccus; OCL_P2A9 Oscillatoriales; OCL_P2D9 Gracilimonas. See Lindemann, et al. 2013 Front Microbiol 4:323 doi: 10.3389/fmicb.2013.00323
isolation_source
synthetic
collection_date
2012-02-13
geo_loc_name
USA:Washington
lat_lon
46.349179 N 119.281483 W
BioSampleModel
Metagenome or environmental