Human gut MAG #11 derived from sample SRS1719191
Lachnospiraceae bacterium
ENA-FIRST-PUBLIC
2019-01-29T17:02:52Z
ENA-LAST-UPDATE
2019-01-28T22:39:24Z
External Id
SAMEA5278237
INSDC center name
DOE JGI
INSDC first public
2019-01-29T17:02:52Z
INSDC last update
2019-01-28T22:39:24Z
INSDC status
public
Submitter Id
HGM12116
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
MegaHIT v1.1.1
binning parameters
default
binning software
MaxBin v2.2.4, MetaBAT v2.12.1, CONCOCT v0.4.0, DAS Tool v1.1.0
collection date
2018-01-01
completeness score
50.1
completeness software
CheckM v1.0.7
contamination score
9.85
environment (biome)
human gut
environment (feature)
human-associated habitat
environment (material)
faeces
geographic location (country and/or sea)
Finland
geographic location (latitude)
61.92411
geographic location (longitude)
25.748151
investigation type
metagenome-assembled genome
isolation source
human stool
metagenomic source
408170
project name
Global Human Gut MAGs
sample derived from
SRS883293
sample name
HGM12116
scientific_name
Lachnospiraceae bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach