Metagenome-Assembled Genome (MAG)
Gemmiger formicilis
This sample represents a MAG from the metagenomic run SRR5558052
ENA first public
2021-01-23
ENA last update
2021-01-21
External Id
SAMEA7848169
INSDC center alias
EMG
INSDC center name
EMG
INSDC first public
2021-01-23T04:12:03Z
INSDC last update
2021-01-21T23:18:46Z
INSDC status
public
Submitter Id
SRR5558052-bin.6
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspades_v3.13.0
binning parameters
default
binning software
MetaWRAP v1.1
broker name
EMG broker account, EMBL-EBI
collection date
not provided
completeness score
52.67
completeness software
CheckM v1.0.11
contamination score
0.00
environment (biome)
human-associated habitat
environment (feature)
human gut
environment (material)
faeces
geographic location (country and/or sea)
Spain
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation source
human gut
metagenomic source
human gut metagenome
project name
Human gut MAGs
sample derived from
SRS1996016
sample name
SRR5558052-bin.6
sequencing method
NextSeq 500
taxonomic identity marker
multi-marker approach