Metagenome-Assembled Genome (MAG)
uncultured Lachnospiraceae bacterium
This sample represents a MAG from the metagenomic run SRR341620
ENA first public
2021-01-22
ENA last update
2021-01-21
External Id
SAMEA7847935
INSDC center alias
EMG
INSDC center name
EMG
INSDC first public
2021-01-22T04:11:13Z
INSDC last update
2021-01-21T23:14:32Z
INSDC status
public
Submitter Id
SRR341620-bin.5
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
spades_v3.11.1
binning parameters
default
binning software
MetaWRAP v1.1
broker name
EMG broker account, EMBL-EBI
collection date
not provided
completeness score
62.38
completeness software
CheckM v1.0.11
contamination score
2.27
environment (biome)
human-associated habitat
environment (feature)
human gut
environment (material)
faeces
geographic location (country and/or sea)
China
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation source
human gut
metagenomic source
human gut metagenome
project name
Human gut MAGs
sample derived from
SRS259473
sample name
SRR341620-bin.5
sequencing method
Illumina Genome Analyzer II
taxonomic identity marker
multi-marker approach